Callorhinchus milii (elephant shark): 103176969
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Entry
103176969 CDS
T03088
Symbol
smo
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
103176969 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cmk04030
]
103176969 (smo)
G protein-coupled receptors [BR:
cmk04030
]
Frizzled / Smoothened family
103176969 (smo)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Fz
DUF7470
Motif
Other DBs
NCBI-GeneID:
103176969
NCBI-ProteinID:
XP_007889054
UniProt:
A0A4W3IQU6
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All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MSTTPRNSFVRAAVCLFSLWEFMAQCGEAESNQSDASDPCKRASECQPLKYNTCLGSALP
YTHTSISLAEDSSTQEEAHNKLVLWSGLRNAPGCWNVIQPLLCAIYMPKCENGKVDLPGQ
VLCQITRRPCAIVQRERGWPDFLKCTADRFPEGCLNEVQNIKFNSSGRCESPLVRTENPK
SWYEDVEGCGIQCQNPLFTDDEHDAMHVYIAIFGSITIFCTFFTLATFVADWKNSNRYPA
VILFYVNACFFIGSIGWLAQFMDGARKEIVCKADGTMRLGEPTSNETLSCVIIFVIVYYS
LMSGVIWFVMLTYAWHMSFKALGTTYQPLSGKTSYFHLVTWSIPFILTVTILALAQVDGD
SVSGICFVGYKNYHFRAGFVLAPIGLVLVVGGYFLIRGVMTLFSIKSNHPGLLSEKAASK
INETMLRLGIFGFLAFGFVFITFGCHFYDFFNQADWERSFREYVLCEANVSIAEQTNTPI
PECSIKNRPSLLVEKINIFAMFGTGIAMSTWVWTKATVLIWKRTWFRIIGRSDDEPKRIK
KSRMIAKAFSKRKELLKNPEKELSFSMQTVSHEGPVAGMNLDLNEPSADLSSAWAQHVNK
MVARRGAILPQDISVTPVGTPVPPDENDQNLWIIEAEIPPDLLKRAGNRKKKKRKKAIRP
LGPVDEIHDMGYFTERASSTVPRLPKLPRQKSLVSRGIEPVHMEDILPGAFPEYVTNPGR
HGGRFPKEMFNGSFECRRKSSLNLIANPLSVEEISQDEAGFVLGARFCPPQRPYNRVFPH
SSTDLVPIRVPVVNVPYVNRPQGRRVGLAPVHSRTNLVDTELMDADSDF
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtctactactccaagaaattcctttgttagagcagccgtctgcctgttctcgctgtgg
gaattcatggcgcagtgtggagaggctgagagcaaccagagcgacgcgtctgatccatgc
aagagagcatcggaatgccagcctttgaaatacaacacatgtctgggctctgccctgcct
tacacccacacctccatcagcctggctgaggactccagcacacaagaggaggctcacaat
aaactcgtgctgtggtcagggctgaggaatgctcccggctgctggaatgtcattcagccg
ctgctgtgtgccatctatatgccaaagtgtgaaaatggcaaagtggacctgcccggtcag
gtgctgtgtcagatcacccgcagaccctgtgccatcgtgcagagagagagagggtggcca
gacttcctgaaatgtacggctgatcgctttcctgaaggatgcttgaacgaagtccagaat
atcaagttcaacagctctggtcgttgcgagtcacctctggtgagaacggagaatccgaag
agctggtacgaggacgtggagggctgcgggatccagtgtcagaatccgctcttcactgac
gacgaacacgacgccatgcacgtctacatcgccatctttggctccatcactatattctgt
accttcttcacactggccacgtttgtcgctgactggaagaattctaaccgctacccagcc
gtcatcttgttctacgttaacgcctgtttcttcattggaagcattggctggctcgcgcag
ttcatggacggggcaaggaaggagattgtgtgcaaagcggacgggacaatgcgactcggg
gagccaacgtccaatgaaactctctcctgcgtgataatatttgtcatcgtctactactcg
ctgatgtctggggtgatctggtttgtgatgctgacctacgcttggcacatgtcattcaag
gctctcggcaccacctaccaacccctgtctggaaaaacgtcctacttccacttggtcacc
tggtccatcccattcattctcaccgtcaccatcctggctttggctcaggtggatggagac
tctgtgagtgggatatgctttgttgggtataaaaattatcacttccgagcgggatttgtc
ctagctcccattggattggtgctggtggttggtggctatttccttatcagaggtgtcatg
accctgttttcaatcaaaagtaaccaccctgggctcctgagtgagaaggcggccagtaag
atcaatgaaacaatgctacgcttgggtatttttggattccttgctttcggatttgttttc
atcacgtttggctgccatttttatgacttctttaaccaggcggattgggagagaagcttc
cgcgagtatgtcctatgtgaggccaatgtgtctatcgctgaacagaccaatacgcccatt
cctgaatgcagcatcaagaatcggcctagcctgctggtggagaagatcaacatttttgcc
atgtttgggacgggcattgctatgagcacttgggtgtggaccaaagctactgtcctgatc
tggaaaaggacctggttcagaattatcggtcggagtgatgatgagccaaaacgaataaag
aaaagtcgaatgatcgccaaagcgttttcaaagaggaaggagctgctgaaaaacccagag
aaggagctctcgttcagtatgcagacagtctctcatgaaggaccagtggctggaatgaac
ttagatctcaatgagccatctgctgacctctcatctgcgtgggcacaacatgtaaacaaa
atggttgcccgaagaggagccattttacctcaggacatttctgtcactccagtagggaca
ccagtgccgccggatgagaacgatcaaaacctgtggatcatcgaagctgaaatccctcca
gatctcctgaagagagctgggaataggaagaagaaaaagaggaagaaagccattagacct
ctgggacccgtggatgagatacatgacatgggctactttacagagcgggcatccagcaca
gtccctcgcctgcccaagctgcctcggcagaagagtttggtgtcgagaggcattgagcct
gttcacatggaagatattttaccgggcgctttcccggaatacgttacaaacccagggcgt
cacggtgggagatttcccaaagaaatgttcaacggttcttttgagtgcagaagaaagtcg
tctttgaatttgatagcaaacccactctcggttgaggagatatcacaggacgaagctgga
tttgtcctcggagctcgattttgccctccacagagaccgtataatcgtgtgtttccccat
tcctcaactgatttggtccccattagggtgccggtagtcaacgtaccatatgttaacaga
ccccaaggtagaagggttggcttagcaccagtacactcaagaacaaaccttgtggacaca
gagttaatggatgcggactctgatttttga
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