Callorhinchus milii (elephant shark): 103177057
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Entry
103177057 CDS
T03088
Symbol
usp6nl
Name
(RefSeq) LOW QUALITY PROTEIN: USP6 N-terminal-like protein
KO
K20133
USP6 N-terminal-like protein
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103177057 (usp6nl)
Membrane trafficking [BR:
cmk04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103177057 (usp6nl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
103177057
NCBI-ProteinID:
XP_042190785
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MNPDVEPDAATKLAQERAEIVSKYDKGTRGAKIDPWEDAEFHIYKVTDRFGFLHADELPV
PDAVEERVKQLEIERTGKWIKMVKGWDKYKNTEKMVRRIYKGIPLQLRGEVWSLLLEIQK
LKTEKKDLYDKLKSRARVVSPDVRQIDLDVNRTYRDHIMFRERYGVKQQALFHVLAAYSM
YNTEVGYCQGMSQITALLLMYLNEEDAFWALVRLLSGPKHAMHGFFVPGFPKLLRFQEHH
ERILKKFMNKLKQHLDSEDVFTSLYTMKWFFQCFLDRTPFTLTLRLWDIYMLEGERILIA
MSYTILKLHKKHLLKLSMEDLIQFLQESLAKDFFFDDDFVIDQLQNSMTELKRSKLDLPA
AGKADEFPQRSLGQIPAEPEMPPVVNHALNGQNNAAKVGPPTAKRKDRKTASEKLPEKEP
DSRSRRXSPEKSPLKSQKPAGLAENQRSRVKVLPDMDMRRQPGLSPQHGAAAATAARRDP
RQVSHASANQNSNANPGAKKEFAPKWNKPSGVRTQAAEGRGRTGSYNEPSSPSSPEETRL
LMARAKRHIIEVDETKRDSNASEYDNVPGEEHEYDGRVEVLERRDPNAPHNDTITVREAI
FKAPSPSRLFPPGVSSSTSNANATSQPRSSRTASMSSNQRSPVKRQPTLPPSYSGPPVYH
GSPPQYSPARERDREMPLSPQHHFNLSGIQVNPDNRQYGTKITHMSDHPEAYLNSHSAGR
QYSNASQTFRIAVQPSDHGGRFDSVNSAKYARQPVAHRGPQQFSPEQYMDYQIDHRRRQE
SSPPYRQEQYIRQWSQEPDPWHMGTLQRSPSFGKAQQAPVSEFTYPGPPVDVTSAYYRTA
PYQDAQPRHQRSPQYSGQHYGKPQTDGRTIPESVLL
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagatgtagaaccagacgcggcaaccaaacttgcccaggaaagagccgagata
gtgtcgaagtatgacaaggggacgagaggagcaaagattgatccgtgggaagatgcggaa
ttccatatctataaagtcacggatcgttttggtttcttacatgcggatgagctccctgtg
cctgacgctgtggaagaaagggttaagcagttggagattgaaagaacaggaaaatggatc
aaaatggtgaaaggctgggacaaatacaagaacactgaaaagatggtgcggagaatatat
aaaggaatcccactgcagctcaggggcgaggtctggtcacttttgctggaaatccaaaaa
ctgaagactgaaaaaaaagacttgtacgataaactcaaaagcagagcacgggtggtgtct
ccagacgtcaggcagattgaccttgatgtgaaccgtacttacagagaccacatcatgttc
agggaacgatatggagtcaaacaacaagccttgttccatgtattagctgcatattccatg
tataatacggaagtcggatactgccagggaatgagtcagatcactgctctgcttcttatg
tatctgaatgaagaggatgccttctgggcactcgttagactactgtctggcccaaaacat
gccatgcatggattctttgttcctggcttcccaaagctgttgcggtttcaagaacaccat
gaacgcattttaaagaagttcatgaacaaactgaaacaacacctggattccgaggacgtg
tttaccagtctgtacaccatgaagtggtttttccagtgtttcttggaccgaactcctttc
accctaacgttgaggctatgggacatctacatgttggaaggtgaacggattctcatagcc
atgtcctacacgatacttaaactgcacaaaaagcatctactgaagttgtcaatggaagac
ttgattcagttcctccaggagagtttggccaaagactttttctttgacgacgactttgtg
atcgaccagctccagaactcgatgactgagctgaaacgtagcaaactggatttgccagca
gcaggcaaagcggatgaatttccacagaggtccctgggtcagataccggcagagccggag
atgccccccgtcgtgaaccacgccctcaacggccaaaacaacgcggctaaagtgggaccc
ccaacggcaaagagaaaagatcgcaagacggcgtcggagaaactgccggagaaggaaccc
gacagcaggtcgagaagangttctcccgaaaagtcgcctcttaaatctcaaaagccggca
gggttggcagaaaaccagcgaagccgagtgaaagtcctgccggatatggacatgaggaga
cagccggggctgtcaccccagcacggagcagcagcagcaacagcagcgcgcagggaccct
cgacaggtcagccacgctagcgccaaccagaactccaacgccaaccccggcgctaagaag
gaatttgcaccaaagtggaacaaaccttcgggggtgaggacacaggctgcggagggcagg
ggcaggactgggagctacaatgaaccaagctccccgtccagcccggaggaaacgcgcctg
ctcatggcgagagccaaacgccacatcatcgaggttgacgaaacaaagagggattcgaac
gcttccgaatacgacaacgtccccggggaggagcacgaatacgacgggcgcgttgaggtg
ctggagaggagagaccccaacgcgcctcacaacgacacgataaccgtgcgggaagcgatc
ttcaaagctccgagtccgtccaggctttttcctccaggggtgtcgagcagcacaagcaat
gccaatgcaacctctcagccgagatcctcaaggactgcctcgatgagctctaaccaaaga
tcgccagtaaagcggcaacctaccttgcccccgtcctacagcggcccccccgtgtaccac
ggcagccccccgcagtactcgcccgccagagagagagacagagagatgcccctctcgcca
cagcatcatttcaacttgtccgggattcaggtcaaccctgacaacagacagtacggtacg
aagataacgcacatgtcggaccatcccgaggcgtacctgaactcccactccgctggccgc
caatattctaacgcttcacagacattcaggatcgccgtgcagccttcggatcacggcggg
cggtttgactcggtgaacagcgccaagtacgcgaggcagccggtcgcgcacagaggcccg
cagcagttttcgccagaacagtacatggattaccaaatcgaccaccgaagaaggcaagag
tcctctccgccctacaggcaggaacagtacatccggcagtggagccaggagcctgacccg
tggcacatgggaactctacagcgatcgccaagtttcggaaaggcacagcaggctcctgtg
tcggaattcacctacccaggcccgcctgtggacgtcaccagtgcctattacagaactgca
ccctatcaagatgcacagccacgacatcagcgctcgcctcaatacagtggccaacattac
ggaaagcctcagacagacggacgaaccatccccgaatcagtgttactctag
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