KEGG   Callorhinchus milii (elephant shark): 103177200
Entry
103177200         CDS       T03088                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03030  DNA replication
cmk03410  Base excision repair
cmk03420  Nucleotide excision repair
cmk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103177200 (rfc3)
   03410 Base excision repair
    103177200 (rfc3)
   03420 Nucleotide excision repair
    103177200 (rfc3)
   03430 Mismatch repair
    103177200 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmk03032]
    103177200 (rfc3)
   03036 Chromosome and associated proteins [BR:cmk03036]
    103177200 (rfc3)
   03400 DNA repair and recombination proteins [BR:cmk03400]
    103177200 (rfc3)
DNA replication proteins [BR:cmk03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103177200 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    103177200 (rfc3)
Chromosome and associated proteins [BR:cmk03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    103177200 (rfc3)
DNA repair and recombination proteins [BR:cmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103177200 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    103177200 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA Rad17 AAA_lid_RFC1 AAA_22 AAA_16 nSTAND6 ABC_tran Sigma54_activ_2 MyTH4 PRK T4SS-DNA_transf AAA_5
Other DBs
NCBI-GeneID: 103177200
NCBI-ProteinID: XP_007889461
UniProt: A0A4W3K3H7
LinkDB
Position
Unknown
AA seq 356 aa
MSLWVDKYRPTALGKLDYHKDQAGQLRNLVQCGDFPHLLVYGPSGSGKKTRIMCLLRELY
GAGIEKLRIEHQSITTPSKKKLEISTIASNYHLEVNASDAGNNDRVVIQELIKTVAQSQQ
LETSTQRDFKVVVLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVISPIRSRCL
AVRVPAPSIEEICHVLSGVCKKECLILPQELARKIAEQSNRNLRKALLMCEACRVQQYPF
SVDQDIPETDWEVYLRETANAIVNQQTPQRLLEVRARLYELLTHCIPPEIIMKGLLSELL
NNCDGQLKGEVSQMAAYYEHRLQLGSKAIYHLEAFVAKFMAIYKQFMEVGLEAMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtctctgggtggacaagtaccggccgacggctctgggcaaactcgactaccacaag
gaccaggccggccaactgcgcaacctggtacaatgtggtgatttccctcatttactggtt
tatggaccatcagggtcaggaaagaagaccaggataatgtgcttacttcgggagctttat
ggtgcaggaatagagaagctaaggattgaacatcagagcattacaactccatccaaaaag
aaattagaaataagcacaatagcgagcaactatcatcttgaagttaatgcaagtgatgct
ggaaacaatgaccgagtggttattcaagaactgattaagacagtagctcagtctcaacag
cttgaaacaagtacacaacgagacttcaaagttgtggtgctgactgaggtcgacagacta
acaaaggatgcccaacatgccctgaggagaactatggaaaagtacatgtccacgtgtaga
ttaattctttgctgtaattccacatcaaaagtaatttctcctattcgcagtcgatgtctt
gcagtgcgagtgcctgcacccagtattgaggaaatctgtcacgtcttaagtggagtgtgc
aagaaagaatgtctaatacttcctcaagaactggctaggaaaatagctgagcaatccaat
cgaaatcttagaaaggcattacttatgtgtgaagcctgcagggttcaacagtatccattt
tcagttgatcaagacattcctgagacagactgggaggtatacctcagagagaccgctaat
gctattgtcaaccagcaaacgccacaaagattattggaggtgcgtgcacggttgtatgag
cttctgactcactgtatccctcctgagataataatgaagggtcttctgtcagagttgtta
aacaactgtgatgggcaactcaaaggcgaagtttcacaaatggcagcctattatgagcat
cggctgcagttgggcagcaaggccatttatcacttggaagcatttgtagccaagtttatg
gccatttacaagcaattcatggaagtgggattggaagctatgatgttttga

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