Callorhinchus milii (elephant shark): 103177235
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Entry
103177235 CDS
T03088
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cmk04990
]
103177235
Domain-containing proteins not elsewhere classified [BR:
cmk04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
103177235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THSD1_D2
THSD1_N
THSD1_D3
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
103177235
NCBI-ProteinID:
XP_042190363
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MKHTVSPALVSHLTRVLLLAACGCVVFAEVSYRLSRQLRHVALSNQTIYVDVRDLSNQTV
QDVTVSLVDVSRNQTVTTKSTAGNQSQASVGFECFHFKQAGEFEFRGRDLRANGTTEWTS
EILHVEWPAFHTEVKRKSDVWQSSFQVGVFTSEFLCPWWPSALRLSLDVTSSDFHQPGMY
DKHKALKRTISKDIELSNSQWVEFDCSHFRQDSLITILLRAPHTGEVISSEGPLVFDRIF
GYKLVVDHLKTSTCELSTGVHIVAPPCVNLQGTISVYKDSFTRESFVAENWLHPGNNKTE
FNCSLFDAGKSNYCFKYVSVLNHSHSAPKAKSCVTLQIDAERWTVWLSWSPCSVTCGDGT
RERYRQCISPSSGNVKCTGENKEVSHCSLVDCTGKKPGDSGGAESGYKASNIVTITGIFL
CLVIIIGTVAIAIRTKLSCKEEKCNLGGRRGSLQTHNLSEDPGDDRILGNSNRRVEDGTI
IPLSCRRSQQFVSTTTTCLYLAPVTAGHVPEKVSSQDGLSEEGLPSAQRVVPPIFGYRLA
HQQLKEMKKKGITEATHVYHVTQRDEEAEAETDRGVATVPALEKESNMENSVNRFRIQAP
FLDQKQSMPCKAQVERANHWTDFELAQFGDRGSERYLHRAVAQTLCRAAAAQCRQGQCEG
GIGGGHSRRTCSFSEYKGGKYYRERSRSAGTSKLQSSYHSRAAYRTGSSMDRCNGSAFPP
PPLPPPRSGHTTTSAKPPGWSYSGSANLKHHPKSRSGKAEQLREETITGAVNHMELSPSK
PRSGPTNRYHSPTSLSDPSSAEKYYNWKYPWSNPLPRHHYRQERCQSFPSAPSFLPYDNS
GFDLSALDQRVTDVAGYFDLHVKEGEGDTTTLSNEKLVV
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacactgtgagcccagctctagtctcacatcttacacgcgtcttgctgctggcg
gcttgtggatgtgttgtttttgctgaagtcagctatcgcctctcaagacaactccggcac
gtggctctgagcaatcagaccatctacgtggacgtcagagatctgagcaaccagaccgtc
caagatgtgaccgtgtcgctggtggacgtcagcagaaatcaaactgtgacgacaaaatcc
acggctgggaatcaatcccaggcctccgtggggttcgaatgtttccatttcaagcaggcg
ggagaatttgagttcagaggcagagatttgagggccaacggcaccactgagtggacgagc
gaaatactgcacgtggaatggccagcgttccacaccgaggtcaagaggaagagtgacgtg
tggcagagcagtttccaggtgggagtcttcaccagtgagtttctgtgcccgtggtggccg
agtgcactgaggttgtctctggatgttaccagcagcgatttccatcagcctggaatgtac
gataaacacaaagccttgaagagaacaataagcaaagacatcgagctttccaattctcag
tgggtggaattcgattgctcacatttcaggcaagactctttgattacgattttattgagg
gctccacacacaggtgaggtgatatcttcggaagggccgttggtgttcgatcgaatcttc
gggtacaagctagtcgtcgatcacttaaaaacctccacgtgcgagttgtccacaggtgtg
catattgttgctcccccctgtgtgaacctacagggcacaatctccgtgtataaggattca
ttcacaagagagagttttgtagctgagaactggctccatcccgggaataacaagacggag
tttaactgctctctgtttgacgctgggaaaagtaactactgcttcaagtatgtcagtgtt
ttgaaccacagccattctgcccccaaggcgaaaagttgcgtaacactccagatagacgca
gaaagatggactgtctggctgtcttggagcccatgcagcgtaacttgtggtgatgggaca
cgtgaaagataccgtcagtgcatctcaccctcctcagggaacgttaaatgcaccggggag
aacaaggaggtttcccactgttctcttgtggattgcactggaaagaaacccggggattcg
gggggagctgagtcgggatacaaagccagcaatatcgtgacgatcacaggcattttcctg
tgtttggtgataatcatcggcacggtggctattgcgatacgcacaaagctgtcgtgcaag
gaggagaagtgcaaccttggagggagacggggttcacttcaaactcacaacctcagcgag
gaccccggagatgacaggatactcggcaactcaaaccggcgggtcgaagacggcacgatc
atacctttgagctgcagaaggagccagcaatttgtttcgacgacaacaacttgcctttac
ctagcacccgtcactgcaggtcacgtcccagagaaggtctcgagccaggacgggttgtcg
gaggaagggttgcccagcgcccagagggtggtacctcctatattcgggtaccgcctggca
catcagcagctgaaggaaatgaagaagaaagggataaccgaggccacgcacgtttaccac
gtcacccagcgtgatgaagaggccgaggcagagacggaccgcggtgttgccacagtaccc
gccctagagaaagagagcaacatggaaaacagtgtgaatcgattccgaatccaagctccc
tttttggatcagaagcagtcgatgccctgcaaagcgcaggtggagagagcgaaccactgg
acagattttgaactggctcagttcggcgatcggggcagcgagcgctacctgcaccgagcc
gtggctcagaccctgtgccgggcagccgcagcacagtgcaggcaagggcagtgtgagggg
ggcataggaggagggcacagccggagaacgtgcagcttcagtgaatacaaaggcggcaag
tactacagggagaggagcagatctgccggcacatccaagttgcagtcctcatatcactcc
agagcagcttacaggactgggagcagtatggacagatgcaatggcagtgccttccctcct
cctcctcttcctccgcccagatcaggccacaccacaacctcagcaaagcctcccggctgg
agctatagtggatcagccaacctcaagcaccacccgaaaagcaggtccgggaaagctgaa
cagctgagggaagagacgataactggtgcagttaatcacatggagctctccccaagcaaa
ccgagatcaggtccaaccaaccgatatcactcacccacgtccctcagcgatcccagcagc
gctgagaaatattacaactggaaatatccatggagcaaccctttgccccgccatcattac
agacaagaacgctgtcaaagcttcccctctgctcccagctttcttccctatgacaattct
ggctttgacctctctgctttggaccagcgggtgactgatgtggctggctactttgatctg
cacgtgaaggagggtgaaggagacaccactactctaagcaatgaaaagttggtagtctaa
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