KEGG   Callorhinchus milii (elephant shark): 103177340
Entry
103177340         CDS       T03088                                 
Name
(RefSeq) centrin-1 isoform X1
  KO
K10840  centrin-2
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    103177340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmk03019]
    103177340
   03036 Chromosome and associated proteins [BR:cmk03036]
    103177340
   03400 DNA repair and recombination proteins [BR:cmk03400]
    103177340
Messenger RNA biogenesis [BR:cmk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     103177340
Chromosome and associated proteins [BR:cmk03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    103177340
   Centrosome duplication proteins
    Centriole replication proteins
     103177340
DNA repair and recombination proteins [BR:cmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      103177340
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 AIF-1 EF-hand_5 EH EF_EFCAB10_C EF-hand_14 DUF7645 SurA_N_3 SUB1_ProdP9 SRI Dockerin_1 LETM1_RBD Asp-B-Hydro_N TerB DUF5580_M SPEF2_C MgtE_N
Other DBs
NCBI-GeneID: 103177340
NCBI-ProteinID: XP_042196806
LinkDB
Position
Unknown
AA seq 176 aa
MAAVASIYRKPSSMCATVQRKKSGPKPDINEEQKQEIREAFDLFDADGTGNIDVKELKVA
MRALGFEPKKEEIKKMIAEIDKEGTGKIGFNDFMVAITQKMAEKDSKEEILKAFRLFDDD
ETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEQEFLRIMKKTSLY
NT seq 531 nt   +upstreamnt  +downstreamnt
atggctgcggtggcttccatctacagaaagccatcatccatgtgtgcaacagtacagagg
aagaaatccggaccaaagccagacattaatgaagaacaaaagcaagaaataagagaggcc
tttgatctgtttgatgcagatggcaccggaaatattgatgtcaaagaattaaaggttgca
atgagagctttgggatttgaacccaagaaagaagagataaagaagatgattgcagaaatc
gataaggagggcactgggaagattggcttcaatgactttatggttgcaattacccaaaag
atggctgagaaagattcaaaggaagaaattctgaaagcctttcggttgtttgatgatgat
gaaactgggaaaatctcattcaaaaacctgaagcgtgtggcaaaggagctcggggaaaac
ctgacagatgaagagctgcaggagatgatcgatgaagcagatcgcgatggagatggtgaa
gtgaacgagcaagagttccttcgaatcatgaagaagacaagtttgtattaa

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