Callorhinchus milii (elephant shark): 103177385
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Entry
103177385 CDS
T03088
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103177385
Transcription factors [BR:
cmk03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103177385
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
103177385
NCBI-ProteinID:
XP_042196005
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MEASPNKTIQVTAEEDEEVAAQSENKFVLGLSSRKDQNVTTANKVGQHVTEKIKLEDDDY
YKASSSNRGAQPSKDVLFLKDLNGTDGSQHPDLKLPITLHALPPGIKFQLQGSSSTCDVV
KFAKLPGQLAPSNLSDIRLQTQVDPSMKINTINVPLTVPPTDAEINDMPPSKDRSGHIKR
PMNAFMVWARIHRPSLAKANPNANNAEISVQLGLEWNKLTEEQKKPYYDEAQKIKEKHRE
EFPGWVYQPRPGKKKRFALGVPSNVFSGSGQNIVTTTPATIYPYRPATYSVVIPNLQTSV
NRPSVIGQSQSLRMPVTQGQRPNSIILYPQTNPVQVGLSTQSMPSHSTVPAPCPPGHGRS
EVHHEVPGPSAASNCTEQRIPTMTVDVGKRNSTNETNNLHSRNVIPEVPAQKEIPTVSSC
PRNPPPMPSGSLPHPHAYQHPPMGHAANLFGAAARFPFHHPYFLPGPPYFPSSTCPYSRP
PYGYGDFANSMSECLGYYEDRYQKHEAMFSALNRDYPFREYPDDCQRNTDSRSNSSIEEG
PHPSSLGGEEYLNSVPQLDVGALENVFTTPMSAPSQPQRVEMVHSDDEQEGKVLKSL
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggaggcctctccgaataaaactatccaggtaacagccgaggaggacgaggaggtggcg
gcgcagagtgaaaataagtttgttttaggattaagctcaagaaaggatcaaaacgttact
actgcgaacaaagttggccaacatgtgactgagaagataaaattagaagacgatgattat
tacaaggcatctagttccaacagaggagctcaaccgagtaaagatgtgttgttcctgaag
gatttgaatggtactgatgggtcccaacatcctgatctgaagcttcctataactttacat
gccctcccacctgggatcaaatttcagcttcaaggctcttcttctacatgtgatgtggta
aaatttgccaaattgcctggacaattagcaccaagcaacctaagtgacatcaggctgcag
acacaagtggatccttctatgaagatcaatactataaatgttccccttactgtccctcct
acagatgcagaaatcaatgatatgccaccctccaaagatagaagtgggcatataaaacgt
ccaatgaatgcatttatggtttgggcacgaatccacaggccatcactagccaaggctaac
cctaacgctaacaatgctgaaattagcgtccaactcggactggaatggaacaaactgaca
gaagaacagaagaaaccttactatgatgaagcacagaagattaaagaaaaacacagggag
gaatttcctggttgggtgtaccagccacgaccagggaaaaaaaaaagatttgcattgggt
gttccttcaaatgtcttctctggcagtggtcaaaatattgttactaccacaccggctacc
atttacccttatcgacctgcaacctattctgtagtcatcccgaatctccagacaagcgtc
aaccgcccatcagttattggtcaaagtcagtctttacggatgccagtcactcaaggtcaa
cgtccaaattcaattatattgtatccacaaacaaatcctgtccaggttggtttgtccact
cagagcatgcccagtcactccactgtgccagctccttgccctccaggacatggcaggagt
gaggtgcatcacgaggttcctggtcccagtgcagcatctaattgtacagagcaaagaata
cctacaatgaccgtcgatgttggcaaaagaaattctaccaatgagactaacaaccttcac
agcagaaatgtcatccctgaagtaccagcacaaaaggagataccaacggtttctagctgt
cccagaaatccgccaccaatgccttcaggatcccttcctcacccacatgcctaccagcac
ccaccaatgggacatgctgctaatctgtttggagctgctgctcgctttccctttcatcat
ccctatttcctacctgggccaccctacttcccctcaagtacttgtccttatagcagacca
ccctatggctatggtgattttgcaaacagcatgtctgaatgccttgggtactacgaggac
cgatatcaaaagcacgaggccatgttctcagccttgaatagggactacccctttcgggag
tatccagatgactgccaacgcaatacagactccaggagcaacagcagcattgaggaagga
ccacatcccagcagcctgggaggagaagaatacctgaactcagttcctcagttggatgtt
ggcgcactggagaatgtcttcacaaccccaatgtctgctccatcacagccgcagagagtg
gagatggtccatagcgatgacgaacaggaaggcaaagtattaaaaagtctgtag
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