KEGG   Callorhinchus milii (elephant shark): 103177385
Entry
103177385         CDS       T03088                                 
Name
(RefSeq) transcription factor SOX-30
  KO
K09271  transcription factor SOX15/30
Organism
cmk  Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cmk03000]
    103177385
Transcription factors [BR:cmk03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    103177385
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 103177385
NCBI-ProteinID: XP_042196005
LinkDB
Position
Unknown
AA seq 597 aa
MEASPNKTIQVTAEEDEEVAAQSENKFVLGLSSRKDQNVTTANKVGQHVTEKIKLEDDDY
YKASSSNRGAQPSKDVLFLKDLNGTDGSQHPDLKLPITLHALPPGIKFQLQGSSSTCDVV
KFAKLPGQLAPSNLSDIRLQTQVDPSMKINTINVPLTVPPTDAEINDMPPSKDRSGHIKR
PMNAFMVWARIHRPSLAKANPNANNAEISVQLGLEWNKLTEEQKKPYYDEAQKIKEKHRE
EFPGWVYQPRPGKKKRFALGVPSNVFSGSGQNIVTTTPATIYPYRPATYSVVIPNLQTSV
NRPSVIGQSQSLRMPVTQGQRPNSIILYPQTNPVQVGLSTQSMPSHSTVPAPCPPGHGRS
EVHHEVPGPSAASNCTEQRIPTMTVDVGKRNSTNETNNLHSRNVIPEVPAQKEIPTVSSC
PRNPPPMPSGSLPHPHAYQHPPMGHAANLFGAAARFPFHHPYFLPGPPYFPSSTCPYSRP
PYGYGDFANSMSECLGYYEDRYQKHEAMFSALNRDYPFREYPDDCQRNTDSRSNSSIEEG
PHPSSLGGEEYLNSVPQLDVGALENVFTTPMSAPSQPQRVEMVHSDDEQEGKVLKSL
NT seq 1794 nt   +upstreamnt  +downstreamnt
atggaggcctctccgaataaaactatccaggtaacagccgaggaggacgaggaggtggcg
gcgcagagtgaaaataagtttgttttaggattaagctcaagaaaggatcaaaacgttact
actgcgaacaaagttggccaacatgtgactgagaagataaaattagaagacgatgattat
tacaaggcatctagttccaacagaggagctcaaccgagtaaagatgtgttgttcctgaag
gatttgaatggtactgatgggtcccaacatcctgatctgaagcttcctataactttacat
gccctcccacctgggatcaaatttcagcttcaaggctcttcttctacatgtgatgtggta
aaatttgccaaattgcctggacaattagcaccaagcaacctaagtgacatcaggctgcag
acacaagtggatccttctatgaagatcaatactataaatgttccccttactgtccctcct
acagatgcagaaatcaatgatatgccaccctccaaagatagaagtgggcatataaaacgt
ccaatgaatgcatttatggtttgggcacgaatccacaggccatcactagccaaggctaac
cctaacgctaacaatgctgaaattagcgtccaactcggactggaatggaacaaactgaca
gaagaacagaagaaaccttactatgatgaagcacagaagattaaagaaaaacacagggag
gaatttcctggttgggtgtaccagccacgaccagggaaaaaaaaaagatttgcattgggt
gttccttcaaatgtcttctctggcagtggtcaaaatattgttactaccacaccggctacc
atttacccttatcgacctgcaacctattctgtagtcatcccgaatctccagacaagcgtc
aaccgcccatcagttattggtcaaagtcagtctttacggatgccagtcactcaaggtcaa
cgtccaaattcaattatattgtatccacaaacaaatcctgtccaggttggtttgtccact
cagagcatgcccagtcactccactgtgccagctccttgccctccaggacatggcaggagt
gaggtgcatcacgaggttcctggtcccagtgcagcatctaattgtacagagcaaagaata
cctacaatgaccgtcgatgttggcaaaagaaattctaccaatgagactaacaaccttcac
agcagaaatgtcatccctgaagtaccagcacaaaaggagataccaacggtttctagctgt
cccagaaatccgccaccaatgccttcaggatcccttcctcacccacatgcctaccagcac
ccaccaatgggacatgctgctaatctgtttggagctgctgctcgctttccctttcatcat
ccctatttcctacctgggccaccctacttcccctcaagtacttgtccttatagcagacca
ccctatggctatggtgattttgcaaacagcatgtctgaatgccttgggtactacgaggac
cgatatcaaaagcacgaggccatgttctcagccttgaatagggactacccctttcgggag
tatccagatgactgccaacgcaatacagactccaggagcaacagcagcattgaggaagga
ccacatcccagcagcctgggaggagaagaatacctgaactcagttcctcagttggatgtt
ggcgcactggagaatgtcttcacaaccccaatgtctgctccatcacagccgcagagagtg
gagatggtccatagcgatgacgaacaggaaggcaaagtattaaaaagtctgtag

DBGET integrated database retrieval system