Callorhinchus milii (elephant shark): 103177517
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Entry
103177517 CDS
T03088
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103177517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103177517
Enzymes [BR:
cmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103177517
Ubiquitin system [BR:
cmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103177517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
TRIM_CC
zf-C3HC4
FN3_DSCAM-DSCAML_C
zf-RING_2
zf-C3HC4_3
Pur_ac_phosph_N
zf-C3HC4_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
103177517
NCBI-ProteinID:
XP_007889908
UniProt:
A0A4W3IGF2
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFSCAHRILVSHCASNESVESITAFQCPTCR
YVITLNHRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSESRRERAFDSNTMTSTEKVQCQ
FCEQDPPREAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHLRGLMCLEHEN
EKVNMYCVTDEQLICALCKLVGRHRDHQVAALGDRFEKIKQSLETNLANLIKRNNELETL
MGRLIQTCQHVEANATRQEVKLTEECDQLIEIIQQRRLLIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSGSLITQAEHTLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKMLENLDYLTAPNPPAIREELCTASHDTITVHWTSDDEFSVGSYELQYAI
FTGLANVVSLCSSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSSEPSRLK
TNSQPFKLDPKSAHRKLKVSHDNLSVERDETASKKSHTPERFTSQGSYGIAGNVYIDSGR
HYWEILIAGSTWYAIGVAYKSAPKHEWIGKNTFSWVFCRCNNSWVARHNSKEIPVEPSPH
LRRLGILLDYDNGSLAFYDAVNSQHLYTFDITFVQPVCPTFTVWNKALTVLTGLPIPDHL
DSTEHNE
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggaactgacctgccctatctgtctggagctgttcgaagaccca
ctgcttctgccttgcgcacacagcctctgtttcagctgtgcacaccgaatcctggtttcc
cactgtgcatctaatgagtccgtagaatcaatcacagccttccagtgtccgacgtgtagg
tatgtcatcaccctcaaccatcgtggtctagaagggctgaaacgcaacgtcactctacag
aacattattgataggtttcagaaggcttcagtaagtggaccaaattctccgagtgaaagt
cgcagagaacgggcctttgacagtaacaccatgacgtcaactgagaaggtccagtgtcag
ttttgcgagcaggatccaccgcgggaagctgtgaagacttgtgtgacttgtgaagtctcg
tactgtgacgagtgtcttaaagcaacgcatcccaacaagaagccgttcaccgggcatcgg
ctgatcgagcccatcccggactcgcacctccggggcttgatgtgtctggagcacgagaat
gagaaagtgaatatgtactgtgttacagacgagcagttaatctgtgccctgtgcaagttg
gtggggcggcatcgggaccaccaagtggcagcattaggtgatcgctttgaaaaaataaag
caaagtctggagacgaacctggccaacctaattaagaggaataatgagctggaaacacta
atgggccgattaatccagacctgccagcatgtcgaggcaaacgcaacacgacaggaggtc
aaactaacagaagaatgtgatcagctgattgaaatcatccagcaaagacggctactcatt
ggcactaaaatcaaggaaggaaaggtggtgagattaagaaaactggcacagcaaatagct
aattgcaagcaatgcattgaaagatctggatctctcatcactcaagcagaacacactctg
aaagagaacgatcacgctcgcttcctacagaccgctaaaaatatcactgaaagagtgtct
atggccactgcatcttctcaagtgcttattccagaaatcaatttgaatgatacatttgat
acattcgcattagatttctcacgtgaaaagaagatgctggaaaaccttgattatctcaca
gcaccgaatccacctgctatcagagaagagctgtgtacagcatcacatgacacgatcacg
gttcactggacgtcggatgatgaattcagcgtagggtcgtatgaactacaatatgctatt
ttcacaggactcgccaatgtagttagtttgtgtagctcagccgacagctggatgattgtt
cctaacatcaaacagaaccattacacagtccacgggttgcagagtggcaccaaatacatc
tttattgttaaggccataaatcaggccggcagccgcagcagtgaaccctcccggctaaag
acaaacagccagccatttaaactggaccccaaatccgcccacaggaaactgaaggtgtct
catgacaacctaagtgttgagcgggatgaaactgcctcgaagaaaagtcacactccagag
cgcttcaccagccaggggagctatggcatagctggcaacgtgtatatcgacagtggccgc
cattactgggagatcctcattgcgggaagcacatggtatgcgattggggttgcctacaag
tcagccccaaaacacgagtggattgggaagaataccttctcttgggtgttttgccggtgt
aataatagttgggtggcaaggcacaacagcaaggagatcccagtggagccctcgccacac
ctcaggcggctgggcattttgctggactacgataatggatctttagccttctacgatgcg
gttaactctcagcacctgtacacctttgacattacatttgttcaaccagtgtgccccaca
ttcactgtatggaataaagctctcaccgttttaacaggtttgccaataccagatcatctg
gactccacagagcataatgagtaa
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integrated database retrieval system
