Callorhinchus milii (elephant shark): 103177545
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Entry
103177545 CDS
T03088
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103177545 (sox1b)
Transcription factors [BR:
cmk03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103177545 (sox1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
103177545
NCBI-ProteinID:
XP_007889955
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MYSLMMESELHSPGPQSNTGPPGVASSTGPAGGGGGTNSKMNAERVKRPMNAFMVWSRGQ
RRKMAQENPKMHNSEISKRLGAEWKLMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRK
TKTLLKKDKYSLPGGLLAAGPGGMGMGVSGVSSGVGMGQRLDGPGAGGYSHINGWANSAY
PGSAAAAAAAAAVMMQEQLTYGQHPALAAAGGGGSGAGGGGAHHHHHHHHTPQQMHRYDV
SLQYSPISGSQGYMTASPTYGSLSSAYSQQSSAAGAGISLGSMVKSEPSASPPVGSHSRA
PCPGDLREMISMYLPTAEGSDPSQSRLHALPQHYQSAATGVNGTIPLTHM
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcctgatgatggagagcgagttgcattcccccgggccgcagagtaacacgggg
ccgcccggggtcgccagcagcaccgggcccgccggcggcgggggggggaccaacagcaaa
atgaacgcggaacgggtgaagcggcccatgaacgccttcatggtgtggtcccggggccag
cgcaggaagatggcgcaagagaaccccaagatgcacaactccgagatcagcaaacgcctg
ggcgccgagtggaaactcatgtcagaagccgagaagcgacctttcatcgacgaggccaag
cggctgcgggcgctgcacatgaaggagcatccggattacaaatacagaccccggcgcaag
accaagaccctgctcaagaaagacaagtactcgctgcccggggggctgctggccgctggt
cccggcggcatggggatgggggtgtccggggtaagctcgggcgtcggcatgggacagcgt
ctggacggcccgggtgctggaggctactcgcacatcaacggctgggccaacagcgcttac
ccgggctcggcggcggcggcggcggccgcggccgcggtcatgatgcaggagcagctcacg
tacggccagcacccggcgctggcggcggcgggaggcggagggagcggcgcgggcggagga
ggagcccaccaccatcaccaccaccatcacaccccgcagcagatgcaccgctacgacgtg
tccttacagtacagcccgatctccggctcgcagggctacatgaccgcgtccccgacctac
ggcagcctctcctcggcttacagtcaacagagctccgcagcgggcgccggcatctccctg
ggctccatggtcaagtcggaacccagcgcaagtcctccagttggctctcactctcgggct
ccctgtcccggggacctgagggagatgatcagtatgtatttacccacagcagaagggagc
gacccatcgcaaagtagacttcatgccctccctcagcactatcagagcgcggccacggga
gtcaatggtacaattccattaactcatatgtaa
DBGET
integrated database retrieval system
