KEGG   Callorhinchus milii (elephant shark): 103177579
Entry
103177579         CDS       T03088                                 
Symbol
ercc5
Name
(RefSeq) DNA excision repair protein ERCC-5
  KO
K10846  DNA excision repair protein ERCC-5
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    103177579 (ercc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmk03400]
    103177579 (ercc5)
DNA repair and recombination proteins [BR:cmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     103177579 (ercc5)
SSDB
Motif
Pfam: XPG_N XPG_I UBM YopX
Other DBs
NCBI-GeneID: 103177579
NCBI-ProteinID: XP_042190003
LinkDB
Position
Unknown
AA seq 1766 aa
MPNSTENQPAKPTENTNSFNVIEEFAAGDGPKASNADLLSYRGTCLCPLETGHRTWKFPV
LQAQEVFYNVCSDYGLLNQATIIANAPLSSNDAIPLQDDTSADAQMDAATYADIQVDPPD
VTHRGNAEIGTLSDLHGKQLLAWELDTADFKIVTSNLSRTGHVKKKSTKKMKPLEMHNPK
IIDSSPYAVLEEIKQRKVLDLRRWYCISRPQYKTSCGISSLTSCWNYLFSTCGTGSLPPI
TQEEALHILGFQEPYEDIKFGPFTGNATLMRWFRQLNDHFHMKGCCYVLYKPNGKNRTVG
ETAEGALMKLTQGLKDESMTFVYHCQNHYFCPIGFEATPLKAKKHISEGKLHFDEMEFWI
LIGEPSKKHPAIHCKKWTDIVTDLNTQNPQYLDIRNTDKGIQSRKTLKVGGNLHCIMAFQ
RLNWQRLNTWMMNIGNFRYESSKRSRCKANTSKSDLASNLSDHDEPTVDSRSSGDGFPQV
SEWNPISHPYEYRDGVSPESETDDERSCSPAPSSSVAKPPSITVTSRAPLIAPSPRPSRV
SDTWLSQSLCRRVQRAASSCDGFRFVSHFMRSADTCCEGTLDTDRVNFSFAMGVQGLWKL
LECTRQPINPETLEGKILAVDISIWLNQAVKGARDRHGNAIHNAHLLTLFHRLCKLLFHR
IRPIFVFDGKAPLLKKQTLANRRQRKELATRESKKTTDKLLKTILKRQALKNALGSKSEE
IVPSLSQVRKEEIDDIYVLPPLEKKEENSSDEEAEKEWEERVNNRKLLQNEFLENPHSID
IESEDFASLPPEMRHEILSDLKEFTKRQRTLIYSMPEESTDFSQYQLTGLLKRNKLNQHI
EGIQKEMNEQYSGQIQLQYNKEGGFVKDVETRRLVSEDSTHYILLKGLKSKNTENEEPGL
QTATNLQKTNSSTSTSVGPHSDQKPCVASRPPSSPTDRAAKATTSDNDGSVAAAAPPSPR
TLIAIQAAMLESSSDEETESTENKLLFRNQDWPQHSTNVAATNMNVSPRTYRAIQDALED
DEITTETGWDSLNKCNSSRKRPALSSSSEDDSENKLLKTSVNAQNSSSEQTISQTVGLKD
QSCVEPKEGSITSSQNTLTKVENQSASSVASNAVDTVKIEQNIQELDFQSLEVIKKPEDP
DLINSTDGQTSFSNGEYIHLREKVLSSESKNANNAASPKPPFPITPVPTQAVIFLKPEIQ
DLNNSVPIADQKQGSVEEALDRGKMQINIGSESDSDDSFIEVDDTSKVGSSSDVFPSDTF
TTSSCESESKPAPTGGTQSSETIEKDTEELSQILTLSPLEVEEPVPQEMIEETEENAWDD
IDLEEIEALEDNLFVEQSNLQTQKRRQEQMAATVTGQMYLESQELLRLFGVPYIVAPMEA
EAQCAFLDMTDQTNGTITDDSDVWLFGARHVYKNFFSQDKYVEYYQYVHIHNQLGLDRTK
LINLAYLLGSDYTEGIATVGYVTGMELLNEFLGPGQQPLIQLRDWWNEAQNNKRLQSNPN
DTKVKKKLRELKISPGFPNAAVAEAYLKPSVDESKELLSWGKPDLDQIRDFCKNYFSWNK
TKIDDILLPIIKKLNVHQTQQRIDTFFRVERHEQQAIKSQRLRRAVTCILRKDREETLAE
VQEATAAMGEATKCTGQKRGGEQAMAIQERASGSQSQTRKRQKPQKSPQGLCSGGFIGSA
SLAEAPPSEDEVEVEATNSKRLGLNARSLEKQMKGRENKNDNTAVDMSSSSGDEEDEGAA
KMITARSVFGKRGKLKGARGNPRKKR
NT seq 5301 nt   +upstreamnt  +downstreamnt
atgcccaactctacagaaaatcaaccagcaaagcctactgagaatacaaatagtttcaat
gtcattgaagagtttgctgctggtgacggaccaaaagcttctaatgcagatttgctctcc
tatcgtggcacttgcctttgtcctcttgaaaccggacataggacatggaagtttcctgtg
ctccaagctcaagaagtgttttataatgtctgttcagattatggtttattaaaccaggcc
actattattgcgaatgcgcctctttcttctaatgatgcaattcctttgcaagatgatact
tcagcagatgctcagatggatgcagctacttatgcagacattcaggttgaccctccagat
gtgacccacagaggtaatgcagaaataggcactttgtctgacctccatggaaaacagctg
cttgcctgggagctagatacagcagattttaaaatagtaacatctaatttgagtagaaca
gggcacgttaagaaaaaaagtacaaaaaagatgaaaccattagagatgcacaacccaaaa
atcattgattcctctccatatgcagtgctagaagaaataaaacaacgcaaagttttggat
cttcgaagatggtattgcatcagtcgtcctcagtacaagacgtcatgtggaatttcttct
ttaacttcttgttggaactatttgtttagtacctgtggaacaggaagtctgccaccaatt
acccaagaggaagctttacatatcttgggttttcaagagccctatgaagacatcaaattc
ggaccctttacaggaaatgcaacattaatgagatggttcaggcagctcaatgatcatttt
cacatgaaaggctgttgctatgttttatacaagcctaatggaaaaaacaggacagttgga
gaaactgctgaaggagctctaatgaagttaacccaagggctgaaggatgagtctatgact
ttcgtctaccactgccagaatcattatttttgtcctattggatttgaagctaccccttta
aaagcaaaaaagcatatcagtgaagggaagctccattttgatgaaatggaattctggatt
ttaataggtgaaccaagtaagaaacatccagccattcactgtaaaaagtggacagacata
gtgaccgatctcaatactcagaatcctcagtaccttgatattcgaaatactgacaagggt
atacagtccagaaaaaccctaaaggttggtggaaacctgcattgtataatggcgttccag
cgactgaactggcagaggttgaacacttggatgatgaacattggaaattttagatatgaa
tcttccaagaggtcaagatgcaaggccaatacttccaaatctgacctagcaagcaactta
agtgaccatgatgaaccaacagttgacagcagaagtagtggtgatggtttcccgcaggtg
tctgagtggaacccaatctcccacccatatgaatacagagatggagtatcgcctgaaagt
gaaactgatgacgaaagaagttgcagccccgccccctcgagctcggtggctaaaccgccg
tcaataaccgtcacctcacgcgctccgctcatcgccccctctccccgcccctcgcgcgtg
agcgacacgtggctcagccaatcactgtgccgccgagtgcagagggcggcgtcttcctgc
gacggcttccggtttgtgtcacacttcatgcgatccgcggatacatgctgtgaaggaaca
ttagacacagacagagtgaatttcagctttgccatgggtgttcaaggactgtggaaattg
ttggagtgcacaagacagcccataaatccagaaactctggaaggaaaaatacttgctgtt
gatatcagcatttggttaaatcaagcagtgaaaggagcacgggatcgccatggaaatgct
atacataatgcccaccttctgactttgttccatcgactttgcaagttgttgtttcatcga
ataagaccgatattcgtctttgatggaaaagcacctttgctcaagaaacagactttagcc
aacagacgtcaaagaaaggaactggcaactagagaaagcaagaaaactacagataagtta
ttgaaaaccatcttgaagagacaagctctaaaaaatgctttaggaagcaaaagtgaggag
atcgttccaagtctttcccaagtccgaaaagaagaaattgatgacatttatgtattacct
ccattggagaagaaagaagagaacagttccgatgaggaggcagaaaaggaatgggaggaa
cgagtgaataatagaaaactattgcagaatgaatttcttgagaatcctcattctatagac
attgaatcagaagattttgcaagtctccctcccgaaatgagacatgaaatcctgtctgat
ctcaaagagttcactaagcgtcaaagaactctgatctattctatgcctgaggaatcaact
gatttttcccagtaccagctgacgggtctccttaaacggaacaagctaaatcaacacatt
gaggggattcagaaggagatgaatgaacagtactcggggcaaattcaacttcagtacaac
aaagagggtggatttgtgaaggatgtagaaactagacggcttgtgtcagaagactctaca
cactatattttgctaaaagggctcaagtcaaagaatactgaaaatgaagaacctggttta
caaactgctacgaatctacagaaaacaaacagctcaacttcaacatcagtgggtccacac
agtgatcagaagccctgtgtagcctcacgtccaccatcatctccgacagacagagcagcc
aaagctaccacatctgacaatgacggcagtgttgctgctgctgctcctccttccccacgg
actttgattgcgatacaggcagccatgctcgaaagcagctcagacgaagaaactgaatca
acagaaaataagttactttttcgcaaccaagactggccacagcactcaaccaatgttgcc
gcaacaaacatgaacgtgtcaccaaggacgtatcgagccattcaggatgctttagaagat
gatgaaataacaacagagacgggatgggatagtctcaacaaatgcaacagttctagaaaa
cgacctgctttaagcagcagttcagaggatgacagtgaaaacaagctgctcaaaacgtct
gtgaatgcacagaattcgtcaagtgaacagacgatctcccaaactgttggtttaaaagat
caaagctgtgttgaaccaaaagaaggttctataacaagttcccagaacactttaaccaaa
gtagaaaatcaaagtgctagcagtgttgcgtcaaatgcagtggacactgttaagattgaa
cagaatattcaagaattagattttcagtctcttgaagttattaaaaaacctgaggatcct
gacttaataaattcaacagatggacaaaccagctttagcaatggtgaatatattcatctt
cgtgaaaaagttctgtccagcgaatctaaaaatgcaaacaatgcagcatctccaaagcct
cctttccctatcactccagttcccacccaggctgtcatttttctaaaacctgagatacaa
gatttgaacaattccgttcccattgcagatcagaagcaaggatctgtggaagaagccctt
gatcgtgggaaaatgcagattaatattggatccgagagtgattctgatgatagtttcatt
gaagttgatgacaccagtaaagtgggctcaagcagcgatgtctttccttctgataccttt
acaacttccagttgtgaaagtgaatccaagccagctcctactggtggtacgcaatcttca
gaaaccatagagaaagatactgaagaactgtctcaaatccttactctcagtcctttagaa
gtagaggaaccagttccacaggagatgattgaggaaactgaggagaacgcgtgggatgat
attgatctggaggagatcgaggcactggaggacaacctgtttgtagaacagtcaaatctc
cagactcaaaagcggcggcaagaacaaatggctgccactgtcacaggacagatgtactta
gaaagccaggagttgctacggctttttggcgttccttacattgttgctcccatggaagca
gaagctcaatgtgcctttttggacatgaccgatcaaaccaatgggacaatcactgatgat
agtgatgtatggctatttggagcacgacatgtgtataagaatttcttcagtcaagataag
tatgtggaatactaccagtatgtccacattcataaccagctgggacttgacagaacaaag
ctgatcaatcttgcctatctcctgggaagtgactacacggagggcatcgctactgtaggc
tatgtaacaggaatggaattactgaatgaattccttggacccgggcaacagcctcttatt
cagcttcgagactggtggaatgaagcccaaaacaataagagactgcaaagtaatcccaat
gatacaaaagtgaaaaaaaagctgcgagaactgaagatttctccagggtttccaaatgca
gcagtagccgaagcatatctgaaaccatcagtagatgaatctaaggaattactctcgtgg
ggaaaacccgacttggaccagatcagggatttttgtaagaattattttagctggaacaag
acaaagattgatgacattcttttacccataataaagaaacttaatgtccatcagactcag
caacgtattgatacgttcttcagggtagagcgtcatgagcaacaagcaataaaaagccag
agactgcgcagagctgtgacttgcatcttaaggaaggatcgtgaagaaactttggcagag
gtgcaggaagcaactgctgcaatgggggaggctaccaaatgtacagggcaaaagcgaggt
ggagaacaggcaatggctatccaagaaagagccagtggctctcaatcacagaccaggaaa
aggcaaaagccacagaaatctccacaaggtctttgcagtggaggttttattggatctgca
agcctggccgaggcaccaccttcggaggatgaggttgaagtagaagcgacaaattccaaa
aggcttgggttgaatgccagaagtttagagaagcaaatgaaaggaagagaaaataaaaat
gacaatacagctgttgatatgagcagcagctcaggggatgaggaggatgagggggctgct
aaaatgataacggctagatctgtctttggaaaaagaggaaagttgaaaggagccagagga
aatccaagaaaaaaacgttga

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