Callorhinchus milii (elephant shark): 103177805
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Entry
103177805 CDS
T03088
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03420
Nucleotide excision repair
cmk04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103177805 (ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
103177805 (ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103177805 (ercc8)
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103177805 (ercc8)
Ubiquitin system [BR:
cmk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103177805 (ercc8)
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
103177805 (ercc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
WD_LRWD1
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Nucleoporin_N
eIF2A
Fapy_DNA_glyco
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
103177805
NCBI-ProteinID:
XP_007890338
UniProt:
A0A4W3JTP5
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MLGLLSARQGGFNEPLTLRRAESTRRVLNLELNKDRDVQRIHGSGVNTIDIDPIEGKYML
SGGSDGVIVIYDLENISRKPQYTCKAICTVGRSHQHSHKFSVETVQWYPCDTGMFTSSSF
DKTLKIWDTNSLLPAEVFTFEGTVYCHHMSPIATKHCLIAVGTKNPKVQLCDLKSGSFTH
ILQGHKGEVLSVKWSPRHEHILVTASADSKVRFWDVRQAAGSVIVLDQHNGETAKSSSEA
GNTAHYGRVNGLCFTSDGLHLLTIGTDDRMRLWNSSTGVNTLVNYGKVGNESRKSLQFTV
SSGCSPDFAFVPVGSCISVYDIYSGQLLTELRGHYNSVNCCIFQSDFQELYSGGSDVNIL
SWVPDLGRIVVEEEEPVGSGVSTSVNRAFQDEWSSSEEEN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgctcggtctcttgtcggctcgtcagggcggcttcaatgagccgctgacactgagacga
gccgagtccaccaggagggttttaaatctggagttaaataaagatcgggatgtgcagaga
atccatggaagtggcgttaacactattgatatcgaccctattgagggaaaatacatgctt
tctggtgggtcagatggtgtcattgtaatctatgacctggagaacatcagtaggaagccg
cagtatacctgtaaggcaatctgtacagtgggcaggtctcatcagcactcacacaaattc
agtgtggagactgttcagtggtacccctgtgacactggcatgtttacttcaagctcattt
gataaaacactaaaaatctgggatacaaatagccttttgcctgctgaagtgttcacgttt
gaaggaaccgtctactgtcatcatatgtcaccaattgcaaccaagcattgtctaatagct
gttggtaccaagaatcccaaagtgcagctttgtgatcttaagtctggatccttcacccac
attttacagggtcataaaggtgaggtgttatcagtgaaatggtcaccacgtcatgaacat
atcttagtaacagcaagtgctgacagtaaagttagattctgggacgtacgtcaagctgcg
ggaagtgtaattgtacttgatcagcacaatggtgaaactgccaagtcttcttcagaggca
ggaaatactgcccattatggccgtgttaatggactctgctttaccagtgatgggctgcac
cttttaactattggcacagatgatcgcatgagactctggaatagttccacaggagtcaat
acgctggtgaactacggaaaagtggggaatgaaagccgaaagagcctccagtttacagtg
tccagtggctgcagcccagattttgcctttgttcctgtgggtagttgtatatctgtttat
gatatctactcaggacaactactaactgaactcaggggccattataactctgtaaactgc
tgcatcttccaatctgatttccaagaactctatagtggaggcagtgatgtgaacatttta
tcatgggtcccagatcttggtcgaattgttgttgaagaagaggagcctgtagggtctgga
gtgagcacttctgtgaatcgtgctttccaggatgaatggagcagcagtgaggaggagaac
tga
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