Callorhinchus milii (elephant shark): 103177891
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Entry
103177891 CDS
T03088
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103177891 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmk03041
]
103177891 (zgc:163098)
Spliceosome [BR:
cmk03041
]
Complex A
U2 snRNP components
U2 related factors
103177891 (zgc:163098)
Complex B
103177891 (zgc:163098)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
CID
cwf21
CTK3
RRM_7
Motif
Other DBs
NCBI-GeneID:
103177891
NCBI-ProteinID:
XP_007890453
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MRGASERRWCERRRPDSRFGNGLKAKEMAENKLKNLGVKRTLSKKEQDELRKKEEELKAA
EIYEEFLASFDSNNGSNVKTFVRGGIENPSKVDKGADERKTKLYKPTAKFGELKAPQQDV
STPSRHSSEVRKHPNKKVKDEKKKSNLEIFKEELKQIQEEREERHKNKRSIKDGTLRQSR
FEPIPGDQEQQTNRRVLQDDAQGSYDSGDPHTTNLYIGNINPQMDEEMLCKEFGKFGPLA
SVKIMWPRTEEERARVRNCGFVAFMNRKDADRGLRSLNGKFIMGYEMKLGWGKAVPIPPH
PIYIPPAMMELTLPPPPSGLPFNAQPRVRLRNPDLPLPPAKSKEEFDKTLSEAVVKVVIP
TERNLLCIIHRMIEFVVREGPMFEAIIMNREMNNPLFRFLFENKTPAHVYYRWKLFSILQ
GDSPTKWRTVDFRIFKAGSFWHPPPMNPYLQGMPEDGAVEMPVEQEEPVKKGQLKDEQRD
KLENILRGLAPHRNNIGEAMVFCLNNAEAAEEIVDCIAESLSILQTPLQKKIARLYLVSD
ILYNSCAKVANASYYRKYFESRLPQIFSDMHEAHKVIQARLQAEQFKQKVMACFRAWEDW
AIYPEPFLIRLQNIFLGLMKLDDDASERREVLDDVDGAPIYEDIAPIDDVDGLPIDDIPL
DGAPLDDIDGVPLKLVEDDLDGMPMEETIIKKEEPLLKIAPSKWETVDESLLEAHAITTS
KWDLLDHPESERKVHIKEEVTEETEEEPADTSESEESLVQREEPIDSKSQKFLEISEQKR
AKLREIELKVMKFQDELESGKRPKKSGVTFQQQVEHYRSKLLQREKEKGQDKEVEKKEKE
ITDSERSKDISKEKDKKEKDRTEERSKERDKDKVKAKEKDKIKLKSKEKERSKDRTRNKD
KQKGSSISPSRKGRCTNSPSPSRSSRYGISVSPWSERSQLKENTLSRSPSPAYKDSPKNS
GKRKKRSWSRSRSPKKSKHSHSTSPKKSKPSRSRSRTPHRSRKKSKKSKH
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggagcgagcgagcggagatggtgtgagcggcggcgcccggactcgcggtttggt
aacggtttgaaggcgaaggaaatggcagaaaacaaactcaagaatttaggtgttaaaagg
actctaagcaaaaaagagcaggatgaacttagaaaaaaggaggaagagctgaaggcagct
gaaatctatgaagaatttttagcttcttttgactcaaacaatggaagcaatgttaaaact
tttgtgagaggtggtattgaaaatccatctaaagtagacaagggagcagatgaaaggaaa
acaaaactatataaacctacagccaaatttggtgaattaaaagcaccacaacaagatgtt
tctacaccatccagacattcttctgaagtgaggaaacaccccaacaaaaaagtaaaagat
gagaaaaagaagagcaatttggaaatatttaaagaagagctcaagcagattcaagaagag
cgtgaagagaggcacaagaataaaagatcaattaaagatggtactttaagacaaagtaga
tttgaacccatacctggagaccaagaacagcaaacgaatcggcgtgtcttgcaggatgat
gctcaaggatcatatgattcaggggatcctcacactacaaatttgtacattggaaacata
aatccacagatggatgaagaaatgctttgtaaagaatttggcaagtttggccctttggca
agcgtgaaaatcatgtggcctagaacagaggaagaacgggctagagtccgaaactgtggt
tttgttgccttcatgaacagaaaagatgcagatcgaggtctgagatccctgaatgggaaa
tttataatgggttatgaaatgaagctagggtgggggaaggcagtgcccatccccccacat
cccatatacattccaccagcgatgatggaattgactcttcctcctcctccatcgggttta
ccctttaacgcacagcctagagtgaggctgaggaaccccgatttgccactgccgccagca
aaatccaaggaggaatttgataagactctgtccgaagccgtagtcaaagtggttatccca
acagaaaggaacttattgtgcataattcatcgaatgatcgagtttgtggtgcgtgaggga
ccaatgtttgaagctataattatgaaccgagaaatgaataaccccttgtttaggttcctg
tttgagaacaagaccccagcacatgtgtactacagatggaagttattttctattctgcag
ggtgattctcctacgaaatggcgaacagtagattttcgaattttcaaagctggttcattt
tggcaccctccacctatgaatccctatctgcaaggcatgccagaggatggggccgtggaa
atgcctgttgaacaagaggagccagtgaagaagggacaactgaaggatgaacagcgagat
aaactggagaatatcttgaggggattggcacctcatcgaaataatataggtgaagctatg
gtcttctgtttgaataatgctgaggcagctgaagaaatagtagattgcattgcagagtca
ttgtccattttacagactccactacagaaaaagatagcaagactctacctggtgtctgat
attctgtataattcttgtgcaaaagtagctaacgcatcttattataggaaatactttgaa
tccagacttcctcagatattttctgatatgcatgaagctcacaaagtgattcaagcaaga
cttcaagcagagcagtttaagcaaaaggtaatggcgtgttttagggcgtgggaagactgg
gctatttatccagaacctttcctcattaggctacagaatatattccttggactaatgaaa
ttggatgatgatgcatcagaaagacgtgaggtgcttgatgatgtagatggcgcaccaatt
tacgaagatattgctccgatcgatgatgttgatggattgccaattgatgatattccacta
gatggagcacctttagatgatattgatggagttcctttgaaattagttgaggatgacctt
gatggcatgccaatggaagaaactataattaaaaaggaggaaccattgttaaagattgct
ccttcaaaatgggaaacggtggacgagtcattgttggaagctcatgcaattactacatca
aaatgggatctacttgatcatccagagtccgaacgaaaagttcacattaaggaagaagta
accgaagaaactgaggaggaaccagctgacacttctgagtcagaggaatcattggtgcag
agggaggaacccattgattcaaaatcacagaaattcttagaaatatctgaacaaaaacgt
gccaagctgcgagaaattgagctaaaagtaatgaaatttcaagatgaattggaatcgggt
aaaagacccaagaaatcaggagtgacatttcaacaacaggttgagcattatagaagtaaa
cttttgcaaagggaaaaggaaaagggccaggataaagaggtagaaaaaaaggaaaaagaa
attacagattcagagcgatcaaaggacataagcaaagaaaaagacaaaaaagaaaaagac
agaactgaagaacggagcaaagagagagacaaggataaagtcaaagccaaagagaaagat
aagatcaagctgaagagtaaagaaaaggaacggagcaaagatcgaacgaggaataaagat
aagcaaaagggcagctcaatttcaccctccagaaaagggaggtgtacaaattcaccaagt
ccttcgaggagcagcagatatggaatatcggtctcgccttggtctgaaagatcacagcta
aaagaaaataccctctcgaggtctccatcaccagcatataaagattccccaaagaatagt
ggcaagcggaaaaagagatcttggtcaagatctagatctcccaaaaagtcaaagcattcc
cactcaacttctcccaagaaatccaagccatcacgatcacgttcaagaactcctcaccgg
tctcgtaaaaagtcaaagaagagcaaacactga
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