Callorhinchus milii (elephant shark): 103177938
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Entry
103177938 CDS
T03088
Symbol
vps54
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmk01009
]
103177938 (vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103177938 (vps54)
Protein phosphatases and associated proteins [BR:
cmk01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103177938 (vps54)
Membrane trafficking [BR:
cmk04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
103177938 (vps54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
103177938
NCBI-ProteinID:
XP_042189001
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MASSHSSQPVPHSGSSDGIFKKEMDASKKPLRTVRSLPDVCPKEPTGGTRGLRDXPSVVA
DQHKWTVYHSKVNLPAALNDPRLSKRESDFFTKTWGLDFMETEVMPSFYLPQITKEHFAP
YLQETASRQRIHEKCKETCPTKDGLDRSLSTTVHSNDKSRTDLEQVPKIFMKPDFALEDS
LTFSSVLPWSHFSCHHGAGVKGARDGASSRLLQEKLSHYLDVVEVNIAHQISLRSDAFFH
AMTSQHELQDYLTKTSQAVKILRDKIAQIDKVTCEGSLQILRLAITRNNCVKMYNKLKLM
ATVHQTQPTVQLLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELERLIDKM
MIADFSTYARSDLNRPLEDNQVLEEERLISLVFGLLKQKKLDFLETYSEEMIVAAKNIIK
QSVIETISQMEEIDTEAVVKLADQMRMLNFPQWLELLKNTFSNFIKFLNRVKATINIIRN
VVFLVLDKSRERNRELETAACQKNPVLGHSLETEVAYLTHEGMFISDAFNEREQPAGLDT
EPQRISYHNSEPCGSDSTSEVECTTDSSSSKEQTSSSATGGVEIMVTDDLRLTELELGRI
ANNIQELLYSASDICHDRCVKFLMARAKDGFLEKLNSSEFVALSRTVEAFVQETEKICGR
RSMSLRGALQSQANKFVNRFHEERKTKLSLLLDNERWKQAEVPVEFQDLVNSIADGVIAL
PEKKTAAPQERKPADVLAVDGQKYAVVGTVLLLIRIIFEYCQCVDDIPSITTDMLTRLSD
LLKHFNSRSCQLVLGAGALQVVGLKTITTKNLALASRCLQLIVHYIPIIRVHFEARLQPK
QYNMLRHFEHITKDYNDHIAEILAKLVAIMDGLCDKMLSKHEVKAPVPSGCFRNVCKQMA
KMHEAIYDLLPEEQTQLLFLRINSSFKVHLKRQLTRLNVVNDGGPLHGLVASDLAFYTGN
IQALKGLENLDLNMAEIWEQKR
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagccacagctctcaaccagtgcctcattctggcagcagtgatggaatcttc
aaaaaagaaatggacgcttccaaaaaacccctcagaactgttagatcattaccagatgtt
tgccccaaggaaccaacaggaggtactagaggtttgcgtgatngcccatcagtggtggca
gatcagcacaagtggacggtttatcattccaaagtgaaccttcctgcagcactaaatgat
cccagactttccaaaagagaatccgatttcttcactaaaacatggggattggattttatg
gagaccgaagttatgccttccttctacctcccgcaaatcaccaaggagcactttgcaccc
tacctacaagaaactgcttctcggcaaagaattcatgaaaaatgcaaggaaacatgccca
actaaggatgggcttgacagatcgctttcaaccactgtgcacagcaacgacaaatcgagg
actgatttggaacaagtacctaagatatttatgaaaccagactttgctctggaggattct
cttacattttcttctgtcttgccctggtcacatttcagttgtcaccatggagctggtgta
aaaggagcccgtgatggggcttcctctagattactacaagaaaagttgagccattacttg
gatgttgtggaggttaatatagcgcaccagatttctctccgttctgatgcctttttccat
gctatgacctctcagcatgagctgcaagactacctcacaaaaacgtcacaagctgtaaaa
atactccgggataaaattgctcagattgacaaagtcacatgtgaaggatctctgcaaata
ttgaggcttgctatcactagaaataactgtgttaaaatgtacaacaagctcaaattaatg
gccaccgttcaccagacgcagccgacagtgcagctgttgctctccacttcagagtttgtt
ggggcactggatttaattgcaacaacacaggaggtactccaacaggaacttcaagggatt
catagcttcaggcaccttggttcacagctctgtgagttggagaggctaatagataaaatg
atgatagcagatttttctacctatgcccgtagtgatttaaacagacctttggaagacaac
caagtgttagaagaggaaaggttaatatctctagtgtttgggctgctaaaacaaaaaaag
ctagactttctggagacctacagtgaagaaatgattgttgctgcaaaaaatataattaaa
cagagtgtaattgaaaccatttcacaaatggaagaaattgatactgaagctgtagtgaag
cttgcagatcaaatgagaatgctgaacttccctcagtggttggagcttttgaaaaacaca
ttttcaaattttattaagtttctcaatagagttaaggcaacgataaacatcattcgtaat
gttgtcttcctggtattggacaaaagtcgggaaagaaacagggagctggaaactgcagct
tgtcagaagaatcccgttttgggtcatagtttggagacagaagtggcatatttgactcat
gaaggcatgtttattagtgatgcatttaatgagagagaacaacctgcaggattagacact
gagccccaaagaatatcttatcataacagtgaaccttgtggcagcgattctacgtctgaa
gtcgagtgcacgaccgattcatcctccagtaaggagcagacgtcatcctcagccacaggg
ggagtggagataatggtcactgatgatttgagactgactgaactggaacttggcagaatt
gctaacaacatccaggaactactctacagtgcctctgatatctgccatgacagatgtgtt
aagtttcttatggctagagctaaggatgggttccttgagaagctgaattcttctgagttt
gtggcactctcacgcacagtggaagcatttgttcaggagactgaaaagatatgtggcagg
cgaagcatgtcacttcgtggagctctgcaaagccaggctaataagtttgtgaatcggttc
catgaagaacggaaaaccaaactcagtctcctgctagataatgagcgttggaaacaggcc
gaggttccagttgagtttcaggatcttgtcaattccatagctgatggcgtaattgcttta
cctgagaagaaaactgcagctccgcaagaaagaaaacctgcagatgtcttggctgtagat
gggcaaaagtatgctgtagttgggactgttttgctgttaataagaattatttttgaatat
tgccagtgcgtagatgacatcccctctattactactgacatgctaactcgtctctctgac
ttattaaagcatttcaattcacggagctgccagttagtacttggtgcaggcgcattgcag
gttgtggggctgaagacaataactaccaaaaacctagctcttgcttctcgctgtttgcag
cttattgtgcactacattcccataattagggtgcacttcgaagctcgactacagcctaag
cagtacaatatgttgaggcattttgaacacatcactaaggattataatgaccatatcgct
gaaatcttggcaaaactcgttgcaataatggatggtctctgtgacaaaatgctgtcaaag
catgaagttaaagctcccgtcccctctggctgcttcagaaatgtttgcaaacaaatggct
aaaatgcatgaagcgatatatgatcttctaccagaggaacaaacacagttgttgtttttg
agaatcaattctagctttaaagtccatctgaagaggcagctgacccgtcttaatgtcgtc
aacgatggaggacctttacatgggcttgttgcatcagatctagctttctatactggaaat
atccaagcattaaaaggacttgagaatttggaccttaacatggcagaaatctgggaacag
aagaggtga
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