Callorhinchus milii (elephant shark): 103178163
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Entry
103178163 CDS
T03088
Symbol
fip1l1a
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103178163 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103178163 (fip1l1a)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103178163 (fip1l1a)
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SSDB
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Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
103178163
NCBI-ProteinID:
XP_007890936
UniProt:
A0A4W3J8J0
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Position
Unknown
AA seq
586 aa
AA seq
DB search
MSAEADTMVPEAGAANAGPGDDEEHWLYGDENDPNKQEEQAPVDSATENAPLPAATVEEP
KDNGVARMQPTDEGEEESDSDSDDDDDDVQVTIGDIKTGAPQYTYGVTPVNLNIKSSGRL
YGSGIKAGKGVDLDAPGDISGIPTLEIDLDSFEDKPWRKPGADLSDYFNYGFNEETWKAY
CEKQKRLRMGLEPLPPSSTTNRITVQQGRTGNPEKEPEIPPPKMDFPSPPNRYRAGPPPN
RRLSGSIEVIGGQLITIARVEGRRRDRGGADENAIQVLGDHGAVEFVNSNNPTKRPPFLP
PGAPPLHMTGPPPPFLPPPPPVSATPPLLHPPGMPLTTPPPGFLPPPGAPPPSLVQLESG
APPYNNRAAPPFGYSTNAGCVMSVFHKPDGDHLQPDQMFGFQLFRDYGNLTYPNIPVSSS
WTTLIDNNNKQPQQQPQHWDYYPRRERERERERDRTRERDRDRDRERERDHERERDRSPS
SSAYNGEEGRYRHRDYQSDKVYDRDYHHRDKVSREKEDRHKERRHRDKEEGRHKSSRSSS
RRRHDSEEVDGHKRHKHKKSKRSKEDKEASEERSQEPEPSEAASSN
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgaggccgacaccatggtgcctgaggccggcgcggccaacgcggggcccggc
gatgacgaggagcactggctgtacggagatgagaatgacccaaataaacaggaggaacaa
gcgccagttgacagtgctactgaaaatgcaccgcttcctgctgctactgttgaagaaccc
aaagacaatggggtggctagaatgcagcctacagatgaaggtgaggaagagagcgacagt
gatagtgatgacgacgatgatgatgttcaagtcactattggtgacattaaaactggggca
cctcaatacacctatggagtaacgcctgtaaatctcaatatcaaatcgtcaggaagatta
tatggatctggaatcaaagcaggaaagggagttgatcttgatgcccccggtgatatcagt
gggatcccaacattagaaatagacttggattcttttgaagacaagccttggagaaaacca
ggtgctgacctctctgattacttcaattacggattcaacgaggagacttggaaagcttac
tgtgagaaacagaagcgattgagaatgggacttgaacctcttcctccttcctcaacaaca
aatcgaatcacagtacaacagggcagaactggaaatcccgagaaagagccagagatacca
ccccctaaaatggatttcccatctcctccaaatcgctacagagcaggaccaccaccaaac
agaaggttgtctgggtcaatcgaggttattggaggtcagttgattactattgctcgggtt
gagggccggcgtcgggatcggggtggagcagatgaaaatgccatccaggtacttggtgat
catggagcagtagaatttgttaacagcaacaatccaacgaagcggcctccgtttcttcct
ccaggggcacctccccttcacatgactgggccacctccaccattcctaccccctcctcca
cctgtcagtgccacacctcctcttcttcacccaccaggaatgcctttgacaacaccacca
ccaggttttctgcctccacctggagctccaccaccttcacttgtgcaattggaaagtgga
gctccaccctacaacaatcgtgccgctcctccgtttggatactcaaccaatgctggctgc
gtgatgtcagtgtttcacaaacctgacggggaccatctacaacctgatcagatgtttgga
tttcagctatttagagattatggtaatttgacctatcccaatatcccagtttcttcttcc
tggacaactctaattgataataacaataagcagcctcagcagcagccacagcactgggat
tattatccccggagagagagggaaagggaacgtgaacgggatcgcaccagagaacgagat
cgtgatcgcgacagagaacgagaacgtgatcatgagcgagagcgggaccggagccccagt
tcaagtgcttacaacggtgaagaaggtcggtacagacacagagactatcagtcagacaaa
gtctacgatcgtgattaccatcacagagataaagttagcagagaaaaagaagatcgtcac
aaagaacgacgccaccgggacaaagaggagggtagacacaaatcatcaagaagcagcagc
agacggcgccacgacagtgaagaggtagatggccacaagcgacacaaacataagaagtcc
aagcgaagcaaagaagataaagaagccagtgaggaacgttcccaggaaccagagcccagc
gaagctgctagtagtaactag
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