Callorhinchus milii (elephant shark): 103178245
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Entry
103178245 CDS
T03088
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103178245 (fmr1)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103178245 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
103178245 (fmr1)
mRNA cycle factors
Stress granule specific factors
103178245 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXMR_C2
KH_1
Agenet
KH-I_KHDC4-BBP
KH_2
Tudor_2
Motif
Other DBs
NCBI-GeneID:
103178245
NCBI-ProteinID:
XP_042196619
UniProt:
V9KEJ2
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MEDLMVEVRGSNGAFYKAIVKDVHDESLTVAFENNWQPERQIPFHDVRFPPPAGYNKDIN
EGDDVEVYSRANEKEPCGWWLAKVRMMKGEFYVIEYAVCDATFNEIVTVERLRPINPNKP
ATKNTFHKIKLDVPDDLRRSCTNEASHKDFKKAIGAYCVYFDSESNQLVVLSTNEMTAKR
ASMLSDMHFRSIRTKLTLMLRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN
IQQARKVSGVTAIELDEETCTFHIYGEDQEAVKQARNYLEFTEDSVQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEGDGDKKIPREEGMVPFVFVGTKESISNARVLLDYHLNYLKE
VDQLRMERLQIDEQLRQMGAGSRPPASRSDKERGYATDDSTSYLRGGRPYSGRGRGRRGP
GYASGNNSEASNTSETESEHRDELSDWSLAPTDEERENYSRRIDSRRRGNTGRGRGGGRG
RGGNKNSSATSDEILRGDIRKRNSSRDSKARMADGSLQIGKSLYGESQIRIDSNNERSVV
TKTSHGPNVFGESTRLRMGKERAQKKEKPESPTDNQQVLVNGVS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggaggatttaatggtggaggtgcgcggctcgaatggggccttttacaaggctattgtg
aaggatgtgcatgatgaatcgttgactgttgcttttgagaacaactggcaacctgagcga
caaattcctttccatgatgtccgatttccaccaccagcaggatataataaagatattaat
gaaggtgatgatgtcgaggtttattctcgagcaaatgaaaaagaaccttgtggctggtgg
ttggcaaaagttagaatgatgaagggtgaattttatgttatagagtacgctgtctgcgat
gctactttcaatgaaatagttacagtggaacgactacggcccatcaatccaaataaacct
gcaacaaaaaacacatttcataaaataaaacttgatgtcccagatgacctgcggcgttcg
tgtaccaatgaagcttcacataaggattttaaaaaagctattggagcttattgtgtatat
ttcgattcagaatccaatcaattagtagttttgtccaccaatgaaatgacagcgaagcga
gcaagtatgctcagtgacatgcacttcagaagcattcggacaaagctaactttgatgttg
aggaatgaagaagccagcaaacaactagagagctctcggcagcttgcatcacgtttccac
gagcagtttattgttcgcgaagatctcatgggtcttgccatcggaactcacggtgccaac
atccagcaagcgaggaaagtgtcaggtgttactgcaattgaactggatgaagagacctgc
actttccacatctacggtgaggaccaggaggcagtcaagcaagccaggaattaccttgaa
tttacagaagactctgttcaagtaccaaggaatttagtaggaaaagtgataggaaaaaat
gggaaactcatacaagaaattgtggacaaatctggagttgtccgagtgagaattgaaggt
gatggagataaaaagatccctcgggaagagggcatggttccttttgtgtttgttggaaca
aaggaaagcataagcaatgcacgtgttctgttggactaccacctgaactacctaaaggaa
gttgaccaactgcgcatggaaagattacaaatagatgaacaacttcgacagatgggtgca
ggttcaagaccccctgcaagtcggtcagataaagaaagaggttatgcgactgatgacagc
acaagttatttgcgtggtggcagaccgtacagtggtcgaggacgtggcaggcgaggacca
ggctacgcatcaggtaataattctgaagcgtcaaacacctctgaaactgaatcggagcac
agagatgagctgagcgattggtcactggctccaacagatgaagaaagggaaaattattca
cgcaggattgacagtcgcagacgtggtaatactggccgtgggcgtggtggagggcgtggc
cgtggagggaacaaaaattcatctgcaacttcagatgaaatcttgagaggagacatccgt
aaacgtaattcttcaagagactcaaaggccaggatggcagatggatcgttgcagattggg
aaatctctatatggggaatctcagatcagaattgacagcaataatgaaaggagtgtcgtg
acaaaaacctcacatggtccaaatgtctttggtgaaagcactcgactgcgcatgggcaaa
gaacgtgctcaaaagaaagagaagccagagagtccaacagataaccagcaagtgctggtc
aatggagtttcttaa
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integrated database retrieval system
