Callorhinchus milii (elephant shark): 103178396
Help
Entry
103178396 CDS
T03088
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmk03021
]
103178396 (chd1)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103178396 (chd1)
Transcription machinery [BR:
cmk03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103178396 (chd1)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
103178396 (chd1)
SLIK complex
103178396 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
CHDCT2
Motif
Other DBs
NCBI-GeneID:
103178396
NCBI-ProteinID:
XP_007891302
LinkDB
All DBs
Position
Unknown
AA seq
1826 aa
AA seq
DB search
MEGHNDEESVSNSSGDSSQSDKESGSSSGSSSDGSSSRSDSNDSSDSDSGSDSGSQSDSD
TSGSRSNASSSRGKRPAESKVPKTDGAEFWKSHPSILAVQRSAMIRKQQQQLQQQQLSSN
NGSEESSSSEGSDDESSSESTTKHKKHRDEDWQMSGTGSEEEEEEEEGQHKSTSGDSESD
YQPTNKVKSRKPQNRAKTKSVKKGKVLKKQTESSDDDDGPDDKRASRRQATVNVSYKEDE
DAKTDSDDLVEMCGEDVPPPLEEEEEFETLERLMDSRKGKKGATGAATTVYAVEAEGNPN
FGFDPLKEVGECQYLIKWKGWSHLHNTWESEETLLQQNTKGMKKLENYKKKEEDKKRWLK
AASPEDIEYFNCQQELVDDLHSQYQFVERIIAHSNQKGVSGFPDYLCKWQGLSYSECSWE
DGGLISRKFKSYIDAYMNRNQSKTIPFKECKVLKQRPRFVALKKQPSYIGSSDVLELRDY
QLSGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHEHQLYGPFLLVVPLSTLTS
WQREIELWSPEMNVVVYLGDISSRNVIRTYEWMHPQNKRLKFNILLTTYEILLKDKSFLG
GVNWAFIGVDEAHRLKNDDSLLYKTMMDFKSSHRLLITGTPLQNSLKELWSLLRFIMPEK
FASWEIFEEEHGKGREVGYTSLHRELEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQ
YYKWILTRNYKALSKGCKGSTSGFLNIMMELKKCCNHCYLIKLPEANDFYNRHEALQHLI
RSSGKLILLDKLLCRLKERGHRVLIFSQMVRMLDILAEYLKCRQFCFQRLDGSIKGELRK
QALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK
KQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGSNPPNSTPFNKEE
LASILKFGAEELFKEPEGEEQEPQEMDIDEILRRAETRENEAGPTTVGEELLSQFKVANF
TTMDDDLEPQRNIKEWDDIIPEVQRRRMEEEARQKELEEIYLLPRMRNCAKQISFNGNDG
RRRRRRSSESDSDSVSEGKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERL
EAIARDAELVDKSEVDLRRLGEMVHNGCIKALRESTAQEKTAARRGKVKGPTFRISGVQV
NAKLVIAHEEELAPLHKSISPDPEDRKKYTIPSHTKAAHFDVDWNKEDDSNLLIGIYEYG
YGSWEMIKMDPDLNLTHKILPDDPDKKPQAKQLQTRADYLIKLLSKDLARKEAQRLAEAN
SKKRKPRNKRSKAVKVVKVEEIKSDSSPPPPSVKSSDEEGEIKDDVPGTKPSKRKSKMEK
ENEERVDHEVAVKKEMEEKEIKKEAKEKEGRKDKKEKEEKKDAKEKDIKKDIKDKKEMKE
KESVHREKEVKEEKATEVKMEMKEKSKKPLLADVPVHITASSEPIPIAEEAEELDQNTFS
ICKERMRPVKAALKQLDRPEKGLSEKEQLEHTRQCLIKIGDHITECLKEYSNPEQIKQWR
KNLWIFVSKFTEFDARKLHKLYKHAIKKRLENSRHNDQHSSTLNIHNAKHSEPEKPRENS
HNDDSSRESHSSDRHHSSHYHDHHRDQHHSDSSRKRPYSSFSNGKDHRDRDHYRSDSRYY
SENKHRKLDEHRSRGHRSEASSKESRSHSDHRSHSDHRSSSDYRSHLDHRSSSDHRSHLD
HRSSSDYRSHSDHRSSSEYSGQKSSRDYRYHSDWPVDHRPSSSGPRSPLDQRSPYDSRSP
LEHRSPLDYSSDHKSTPEHTWNSRKT
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcacaatgacgaggaaagcgtcagcaacagcagtggagactcaagtcaatca
gacaaggaatctggttcgagttcagggagcagcagtgatggcagcagcagccgttccgat
agcaatgactccagtgactctgacagtggctcagactcaggcagccaatccgattctgat
acatcaggttcaagaagtaatgcatcatcatccagagggaagagaccagctgagagcaaa
gtccccaaaaccgatggagcagagttttggaaatctcatccaagtattttagctgttcag
agatctgccatgatcaggaaacagcagcaacagctacagcagcagcaattgtcatcaaac
aatggctcagaggagtcttctagtagtgaagggtctgatgatgaatcttccagtgaaagc
actactaaacacaagaaacacagagatgaagactggcaaatgtctggtactgggtctgaa
gaggaggaagaggaggaggaaggtcaacataagagtacctcaggagacagtgaatctgac
tatcagcccaccaacaaagtcaaaagcaggaaaccccagaacagggctaaaacaaaaagt
gtgaagaagggtaaggtattgaagaaacagactgaatcatcagatgatgacgatggacct
gatgataaaagggcttctcgtcgccaggcaacggtaaacgtcagctacaaggaagatgaa
gatgccaaaactgattctgatgacttggttgaaatgtgtggggaagatgttcctcctccc
ctggaggaagaggaagaatttgagacactagaaagattgatggattctcgaaaagggaag
aaaggagcaactggtgctgccaccactgtctatgcggtagaggctgagggtaatcccaat
ttcgggtttgatcccttgaaggaggtaggcgaatgtcagtacttgatcaaatggaaggga
tggtctcacctccacaacacctgggagagcgaagaaacacttttgcaacaaaacacaaaa
ggaatgaaaaaactggagaactacaagaaaaaggaggaagacaagaaacgatggctgaaa
gcagcatctcctgaagacatagaatacttcaactgtcagcaggagctggtagatgacttg
cacagtcagtatcaatttgtggagcgaataattgcccactccaaccagaaaggtgtatca
ggttttccagactacttatgcaaatggcaaggcctttcatactctgaatgcagctgggaa
gatggaggtcttattagcagaaagtttaaatcgtacattgacgcatatatgaaccggaac
caatcgaaaaccatcccttttaaggaatgcaaggtcttaaagcaaagacccagatttgtt
gcactgaagaaacagccatcatatattggaagttctgatgtattggagctccgggactat
cagctatcagggttaaattggttggcacactcttggtgcaagaacaatagtgttatcctc
gctgatgaaatgggtcttgggaaaacaatacaaaccatctccttcctcagctatctgttc
catgagcaccagctgtatggacctttccttttagtagttcctctctcaacgctaacttcc
tggcagcgagaaattgaactgtggtcacccgaaatgaacgttgttgtttacttgggtgat
atcagcagcaggaatgtgataagaacatacgaatggatgcatcctcagaataaaaggttg
aaattcaatatcttactgacaacatatgagattttgctaaaagataagtcattccttgga
ggtgtaaattgggctttcattggtgtggacgaagctcatcgcttgaagaatgacgattct
cttctttataaaaccatgatggattttaaatccagtcaccggctgcttatcactggtacc
ccactgcaaaactccctcaaagaactctggtccctccttcgtttcatcatgccagaaaaa
tttgcttcttgggaaatatttgaagaggaacatggtaaaggaagagaagtcggatacaca
agccttcacagggagcttgagccattcttactgcggagagtgaaaaaggatgttgagaaa
tccctacctgccaaggttgaacagatcctgcgagtggagatgagtgcacttcagaaacaa
tattacaagtggattttgaccaggaattacaaagccttaagtaaaggctgtaaaggcagc
acatctggttttctcaatataatgatggaacttaaaaagtgttgcaaccattgctacctc
attaaattgcctgaagcaaatgatttctacaacagacacgaggccttacagcatctgatc
cgcagcagtgggaagctgatcttgttggacaagctgctgtgtcgactaaaagaacgagga
catagagtgcttattttctctcagatggttcggatgctggatattctagcagagtatttg
aaatgcagacagttttgtttccagagacttgatggatctattaagggggaactaaggaaa
caagcacttgaccatttcaatgcagaaggatctgaagacttctgcttcttgctgtcaacc
agagcaggagggctgggtataaacttagcatctgcagacacagtggttatttttgattca
gactggaatccacaaaacgatttgcaggctcaagccagagctcacaggattggtcagaaa
aaacaggtgaatatataccggctagttacaaagggaacagtagaagaagagatcattgaa
agagcaaagaagaaaatggtgttggatcatcttgtcatacaacgaatggatacaacaggg
aaaacagtgctgcacactggttccaatcccccaaattctactccatttaataaagaagag
ctggcatctatcctgaagtttggagctgaggaacttttcaaggagccagaaggagaggag
caagaaccacaggaaatggatattgatgaaattcttcgtcgtgctgaaacacgggagaat
gaagctggtcccactacagtgggtgaggagctgctctcacagttcaaggtggcgaatttt
accacaatggacgatgatcttgaacctcaacgaaacattaaggaatgggatgacattatt
ccagaggtacagagaagaaggatggaagaagaagcccgacagaaggagcttgaagagatc
tatttgcttcctcgaatgcgcaactgtgccaaacagatcagttttaatggaaatgacgga
agacgcagaaggaggagatcttcagagtcagacagcgactcagtatctgaagggaaacgc
cccaaaaaacgtggtcggccgcgaacaattccacgagaaaacattaaaggcttcagtgat
gctgaaattagaaggtttatcaagagttacaagaagtttggtggaccccttgagaggcta
gaagcaattgcacgagatgctgaactggtggataaatctgaggtggacctcaggaggttg
ggagagatggtgcacaatggatgtattaaagcacttcgagaatccacagcccaagagaag
actgctgcccgtcgtggtaaagtgaaaggacctacatttcgcatctcaggcgtgcaggtc
aatgctaaacttgtgattgcccatgaagaggaactggcacctttgcacaaatccatttca
ccagacccagaggatagaaagaagtacacaatcccaagtcacactaaagcagctcatttt
gacgtggactggaacaaggaggatgactctaaccttttaataggcatctatgagtatggc
tatggcagctgggaaatgataaagatggatccagatctgaatttaacgcacaagattctg
cctgatgatccagataagaagccgcaggccaagcagttgcagaccagagctgactacctc
atcaaactgctcagtaaagacctggccaggaaggaggcacagaggctggctgaggctaat
tcaaaaaaaaggaagccgaggaataaaagaagtaaggctgtaaaagttgtgaaggtggaa
gaaattaaaagtgattcatctccaccacctccctcagtcaaaagctcagatgaagaagga
gaaatcaaggatgacgtccctggaacaaaaccctcaaaaaggaaatcgaaaatggaaaaa
gaaaatgaggaaagagtggatcatgaagtggcagtcaagaaagagatggaagaaaaggaa
atcaaaaaagaggctaaagaaaaagaaggtagaaaggacaaaaaggaaaaggaggaaaag
aaagatgcaaaagaaaaagatatcaagaaggatatcaaagacaagaaagaaatgaaagaa
aaagaatctgtacatagagaaaaagaagtgaaagaagaaaaggcaactgaagttaaaatg
gagatgaaggagaagtctaagaagccattgcttgctgacgtcccagttcatatcactgca
agcagtgagcccattcccattgccgaggaagcggaagagcttgatcaaaatacatttagt
atttgtaaagaaaggatgaggcctgtgaaggcagcactgaaacagctggacaggcctgag
aagggtctttcagaaaaggagcagctggagcacaccaggcagtgcttgatcaaaataggt
gaccacattaccgagtgtctgaaggagtactcaaaccctgaacaaatcaaacagtggaga
aagaatctatggatttttgtttcaaagttcactgaatttgacgcaagaaaactgcacaaa
ttgtacaagcatgcgatcaagaagagactggagaactctcggcataatgaccagcacagc
agtactctcaacattcacaatgccaaacactcagaacctgaaaagccgagggagaattct
cacaacgacgacagcagtagggaaagccattcatctgaccgacaccactcatcacattat
catgaccaccatagagatcagcatcacagtgattcatcaagaaagagaccgtattcctcg
tttagcaatggcaaagaccaccgagaccgggatcattaccgatcagatagcaggtactac
agtgaaaataagcacaggaagcttgatgaacacaggagtcggggtcaccggtcagaggcc
agttcgaaggagagtagatcccattcagaccaccggtcccactcagatcatcgatccagc
tcagactacagatcccatttggatcatcgatccagctcagaccacagatcccatttggat
catcgatccagttcagactacagatcccattcagatcatcgatccagctcagaatactca
ggccagaaatcctccagggattacaggtaccactcagactggccagtggaccataggcca
tcaagtagtggcccaaggtcccccctggatcagaggtccccttatgactccagatcacca
ttggaacacagatccccccttgattactcttccgatcacaaaagcaccccagagcacacc
tggaacagccgtaaaacataa
DBGET
integrated database retrieval system
