Callorhinchus milii (elephant shark): 103178476
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Entry
103178476 CDS
T03088
Name
(RefSeq) presenilin-1 isoform X1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04310
Wnt signaling pathway
cmk04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
103178476
04330 Notch signaling pathway
103178476
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmk01002
]
103178476
Peptidases and inhibitors [BR:
cmk01002
]
Aspartic peptidases
Family A22: presenilin family
103178476
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
103178476
NCBI-ProteinID:
XP_007891435
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MSGLSAQAVPVFQGGQLGESPSEIHQNSLGWFKMDSADENEENVPLLIVREDVSEEDVRH
NQNDVNRIAADDGVPVSNGQSENNTRPIREQTDDGDEEELTLKYGAKHVIMLFVPVTLCM
VVVVATIKSVTFYTQNDGQLLYTPFTEDTDTVGQRAVNSILNAMIMISVIIVMTLLLVLL
YKYRCYKVIHGWLIISSLLLLFFFSFIYLGEVFKTYNVAMDYFTLALVIWNFGIVGMICI
HWKGPLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRILVE
TAQERNEPIFPALIYSSTMVWLVGMADQEARASSPADEHLTSANISLNNTCVDETAEGPT
NAGETNTDDGGFDTRWRCNRDETLGNVESTPESRAVVQAMPSPPTLDDDPEERGVKLGLG
DFIFYSVLVGKASAAASGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPISITFGLV
FYFATDNLVRPFMDQLAFHQFYI
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtctggattatctgcacaggctgtgcctgtgtttcagggtgggcaacttggagaaagt
ccctctgaaatacatcaaaacagcttgggctggtttaaaatggatagtgctgatgaaaat
gaggagaatgtgcctttgctgattgtcagagaggacgtttctgaagaggatgttagacat
aatcagaacgatgtcaacagaatagcagctgatgatggtgtcccagtgagcaacggtcag
tccgagaacaatacaagaccgatccgagaacagaccgatgatggggacgaggaagagcta
actcttaaatatggggccaaacatgttatcatgctcttcgtgcctgtcaccttgtgcatg
gtggtggttgtggcaaccatcaaatcggttactttttatacacagaatgatggccaattg
ttgtacactccatttacagaggacacggataccgttggtcagcgagctgtgaactccatt
ctcaatgccatgatcatgatcagcgtgattatagtaatgactctactgcttgtacttctg
tacaagtacaggtgctacaaggtaattcatggatggcttataatctcttcactcctgttg
cttttcttcttctccttcatctatttaggggaggtctttaagacgtataacgttgctatg
gattacttcacgctagcattagtgatctggaactttggtatagttggaatgatctgtatc
cattggaagggcccacttcggctgcaacaggcctatctgatcatgatcagtgctttaatg
gcgcttgtcttcatcaaatacctcccggagtggactgcgtggctgatcctggctgtgatt
tcagtatatgatctggttgctgtgctgtgtccgaaaggtcccttgcgcattctggttgaa
actgctcaagagagaaatgaaccaatatttccagctctaatctattcttcgacgatggtg
tggttggttggaatggcagatcaagaagccagagcaagttcaccagcagacgagcatctg
acttctgcaaacattagtcttaacaacacctgtgttgatgagactgctgagggacccact
aatgcaggcgagaccaataccgatgatggtggatttgatacaaggtggaggtgtaacaga
gatgaaacattgggcaacgttgagtccactccagagagtcgagcggttgttcaggccatg
ccaagccctccaacgttagatgacgatccagaggagaggggtgtgaagcttggtttaggg
gacttcatattctacagtgttcttgttggaaaggcatcagcagcagcaagtggagattgg
aatacaactctagcctgctttgttgccatattaattggtttgtgccttactctactgcta
cttgccatctttaagaaggctttaccagcacttccaatatccattacatttgggctagtt
ttctattttgctacagataacttggtacgtccatttatggaccagcttgcttttcatcag
ttttatatatag
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