Callorhinchus milii (elephant shark): 103178493
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Entry
103178493 CDS
T03088
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03040
Spliceosome
cmk05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103178493
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103178493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmk03041
]
103178493
Spliceosome [BR:
cmk03041
]
Common components
Common spliceosomal components
SR proteins
103178493
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Nup35_RRM_2
SET_assoc
Motif
Other DBs
NCBI-GeneID:
103178493
NCBI-ProteinID:
XP_007891463
UniProt:
A0A4W3K1A3
LinkDB
All DBs
Position
Unknown
AA seq
254 aa
AA seq
DB search
MSARVFIGRLSPYATEKNVEKFFRGYGRIREIDLKNGFGFVEFEDYRDAEDAVYELDGKE
LCNERVTVEHARARRGGGGRGPGRYRFGQLRPRGGGRNGPPVRTENRVIVENLSSRVSWQ
DLKDFMRQAGEVTFADAHRHKLNEGIVEFASYSDVKNALDKLSGTELNGRKIRLIEERKQ
YRSRSRSRSRSRSSSRSRSRGRKSYSRSRSRSRSRSRSESRSPVPPKEQRGHSSLASGDH
VRSRTRSPSGESTD
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccgtgtgttcatcgggagactgagcccttatgccactgagaagaatgtggag
aaattcttcaggggttatgggcgaattagggaaattgatttgaagaatggatttggattt
gtggagtttgaagattacagggatgcagaggatgcagtttatgaactggatggaaaagag
ttgtgtaatgagagggttacagtggaacatgctagagcacgtagggggggaggagggcga
ggaccaggacgatatcgatttggtcaactccgtcctcgtggtggaggaagaaatggacca
ccggttcgtacagaaaaccgagtgattgttgagaatttatcttccagagttagctggcag
gacctgaaagattttatgagacaggctggagaagttacctttgcagatgcgcacaggcac
aaactgaatgaagggattgttgagtttgcctcatacagtgatgtgaagaatgctcttgac
aaactatctggcacagagctcaatggaaggaagatcagactgattgaagaacgtaaacaa
tacagatctcgcagcaggtctcgatctcgcagtcgaagttcttccagatctcgctccagg
ggccgcaagtcctacagtcggtctaggagtcgaagccgcagtcggtcacgctctgagagc
agatcacctgttcctcccaaggaacagagaggccattcctctttggcgtctggggatcat
gtaaggtcacgcacacgatcgccttctggtgaaagcacagattga
DBGET
integrated database retrieval system
