Callorhinchus milii (elephant shark): 103178557
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Entry
103178557 CDS
T03088
Name
(RefSeq) neuronal PAS domain-containing protein 3
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103178557
Transcription factors [BR:
cmk03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
103178557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
103178557
NCBI-ProteinID:
XP_007891569
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MIRIFPDFSVQVTAATGGGGAAVTAAPGVGRPAAAAANGTPQNVGLTSYQQRGPSFCYQA
SVMPSLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLK
MRDFANLGDPPWNLRMEGPPPNISVKAIGAQRRRSPSSTAIEVFETHLGSNILQSLDGFL
FALNREGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGILS
QGTAEDGASSASSSSQSETPEPVESTSPSLLSNDNTLERSFFIRMKSTLTKRGIHIKSSG
YKVIHITGRMRLRVSLSHGRVLPTQIMGLVVMAHALPPPTINEVRIDCQMFVTKVNLDLN
IVYCENRISDYMDLTPVDIVGKRCYQFIHAEDVEGIRHCHLDLINKGQCVTKYYRWLQKS
GGYIWIQSCATIAINGKNANEKNVIWVNYLLSDPEYKDIPMDIVQLPNLPEKTSESSETS
DSESDSKENSEDNENPKSDEKGNQSENSDDPESDSKKQSGNHPDHEMNCNDDGNSSSNQD
SRDSDDSFENSDFEGQKAAEDSFGTFGSMQIKVERYAGSESEMHLPNRESVTSDSAKDSD
SAGEMNIQSSSKHQKRKKRRKKQKGGSVTRRRLSSASSPSGLDPNIVDQPQLLSSPNSAS
VLKIKTEITEPINFDNDSSIWNYPPNREISRNESPFSMTKPPSSEHFPSPQASTSLHVTI
PDSVLTPPGTENTASRKTQFSTSSSATLASVSSDPLSPPLSASPRDKQPGGSSTTSSVLY
TSDLETLQRLQAGNVVLPLVHRVTGSLAATSTTPQRVYTTGTIRYAPAEVTFAMQGNLLP
NAHAVNFVDVNSSSFGLEPKTPMEMLYHHVHRINMSGPFGSTVSGASLSQMPAGNMFTTA
EGLFSTLPFPVYSNGIHTTQTLERKED
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggattttcccggatttcagtgtgcaagtaacggcagcaactggtgggggaggc
gccgcggttactgctgcacctggagtggggagacccgccgccgcagctgctaatgggacg
ccccaaaacgtggggctcacatcttaccaacaacgaggaccttcattctgctaccaagcc
tcagtcatgccaagtttacaagccttgcgaaaggagaaatctcgagatgctgctcgatct
cgccggggaaaggaaaactttgaattttatgaattggcaaaattgctcccactcccagca
gccatcacaagtcagttagacaaggcatcaatcatccgactcaccattagttacctgaaa
atgagggattttgccaacctaggtgaccctccctggaacttgagaatggaaggaccacca
ccgaatatttctgtgaaagctataggagcccaacgcaggaggagcccaagttccacggcg
attgaagtgtttgaaacgcatttgggcagcaatattctacagtctctggatggattttta
tttgcactaaatcgagaaggaaaatttttatacatctcagaaacagtctccatctatctg
ggcctttcacaggtggaactgacaggcagcagtgtgtttgattatgtccaccctggagac
catgtggagatggcagagcagctgggcatgaaacttcccccagggcgaggcattctctca
cagggtaccgcagaggatggagccagctcagcatcttcgtcctcacagtcggagacccct
gagccagtggaatctacaagcccaagtttactgagtaatgacaataccttggaacgatca
ttttttatcagaatgaagtcaacactgaccaaacggggaattcacatcaagtcatcgggc
tataaggtaattcatataactggacggatgcgcttgagagtttctctttctcacggacgt
gtgctgcctacacagatcatgggacttgtagttatggctcatgctctgcctcctccaact
attaatgaagtcaggattgactgccaaatgtttgtcaccaaagtaaatttggacctcaat
attgtttactgtgaaaaccggataagtgactacatggacctaactcctgtcgacattgtg
ggcaaaagatgttatcagttcattcatgctgaagatgtagaagggatcaggcactgtcac
ttggatttaataaataagggccaatgtgtaactaagtactatcgctggctacagaaaagt
ggaggttatatttggatccagtcctgtgctactattgccatcaatggaaaaaatgctaat
gagaagaatgtcatctgggtcaattatcttctaagcgatcctgaatacaaggacattccg
atggatattgtacagttgcccaatcttcctgagaaaacatctgaatcatctgagacttct
gattccgaatctgattcaaaagaaaactcagaggataatgaaaatcccaagtcagatgag
aagggaaaccagtctgaaaacagtgatgatccagagtcagacagtaagaagcagtctggg
aaccacccagaccatgaaatgaactgcaacgatgatggcaatagctccagcaaccaggac
agcagggacagtgatgatagctttgaaaattcagactttgagggccagaaagcagctgag
gacagctttggcacttttggttctatgcagatcaaagtggaacgatatgcaggcagtgaa
tcagagatgcacttgccaaaccgggagtcagtgacctcagacagtgccaaggattccgac
agcgcaggagagatgaacatccagtcttccagcaaacatcagaagagaaagaagaggaga
aaaaaacaaaaaggaggcagtgttacacgtagaaggctgtcaagcgcttcaagccctagt
ggacttgacccaaacatagtagaccagcctcaactactgtcttcaccaaacagtgcctca
gtgcttaaaattaaaacagaaataacagaacctataaattttgataatgatagcagtatt
tggaattaccctccaaacagagagatctcaaggaatgaatcccctttcagtatgaccaag
ccccctagctctgagcacttcccttctccacaggccagcactagtttacacgtcaccatt
ccagattctgttctcactcccccagggactgaaaacactgccagccgtaaaactcagttc
agcacctcatccagtgccaccttggcttctgtatcatcagaccctctctctccccctctc
tcagcttccccacgagacaagcagcctggtggctccagcaccaccagttccgtgctgtac
actagtgacctagaaactctgcagagattacaggctggtaatgtggtgcttcccctagtt
catagggtgacaggatccctggctgccaccagcactactcctcagagggtgtataccact
ggcaccattcggtatgctccagctgaggtgacttttgcaatgcagggcaacttgctgcct
aacgctcatgctgttaactttgtggatgttaacagttccagttttgggttagagcccaag
acgccaatggaaatgctttatcaccacgtacatcgaattaatatgtcagggccattcggg
agcactgtgagtggggccagtttgtcccaaatgcctgcagggaatatgttcacaacagca
gagggactcttttccacacttccgtttcctgtgtacagtaatggcattcacactacacaa
acgctggaacgtaaagaggattaa
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