Callorhinchus milii (elephant shark): 103178612
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Entry
103178612 CDS
T03088
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103178612
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmk01009
]
103178612
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmk04515
]
103178612
Protein phosphatases and associated proteins [BR:
cmk01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103178612
Cell adhesion molecules [BR:
cmk04515
]
Cadherins
Protocadherins
103178612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Herpes_glycop
Motif
Other DBs
NCBI-GeneID:
103178612
NCBI-ProteinID:
XP_007891639
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MGWSLLFLGLLSGFAGCGLAFDLVYRVKEGLPRARLIGNIRADLKMEQEGDARITYNLQP
EAVRFVELERASGQLLTSDTALDRESLCAQPSPGQPCALLLDVIILPQRYFRLVKVQVIV
EDINDNPPRFPLDQLSLSIPENSELGARFPVEPSAEDADVGANGLQSYRLLGSQGRFSLS
TERAEDGRLVPWLVVRAALDRELEDVYGMSLVAEDGGSPRLSGSVSLTVTITDINDNCPE
FTRTHLDVTVLANTTVGTSLAQLHTTDPDLGHNAHTEYSYSDRVSLTSRKLFRLDKMSGV
ITLAAPIQRDTAPAHRLTVLATGSGCIPVIAFVQLRVVRLGSSPPVVTPRYIALQSDGVV
YLKETEPAPTPIAFFTVTDPEEEEEEKQEVRCYLEGEGPFRLVPYLTFKDEYLLETSQPL
DYELKRGYELAVVAENTKGLTLRTRLTVQLIDQNDNSPAFTNSLVDVSIEENNPPDTFLI
QLKATDDDSGKMGAIAYTLEPGSPPCFALDQVTGVLAVSASLDREVREKYRLMVRATDGG
SPARESTATVLVTVLDKNDNKPRFINKDFSFFVPENFPSFGEIGVVGVTDPDAGSNGWLA
LSVLNGSEHFVIDTGKGNLMAKVPLDREQQSSYVLWVQAIDGGKPALSAVAQVTILLLDV
NDNPPVVLFPQSNLSFLLVLPSTAPGSSITEVYAVDKDTGMNAVIAYTIIGRRGPRPESF
GIDTSTGNITLQESLVKSDCGLYRLLVKVSDHGYPEPLHSTVIVNLFVNETLSNESYIEN
LLRKDTNIRIEESVPETRVDPFQTKLDQFPCQGVLIALSATCFGLLTVMFSLMCCLFLKK
RKHKSNDYNVAEVEIPLNKSIASHSLEKKPMNDSDL
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgggttggagtctgctattcctggggttgttgagcggctttgcaggctgtgggcttgcg
tttgatctcgtgtaccgagtgaaggaagggctgcccagagccaggctcatcgggaatatc
agagccgacctgaagatggagcaggagggagatgcccgcatcacctacaacctgcagccc
gaggcggtgaggttcgtggagctggagagagccagtgggcagctgctgacctcggacact
gccctggaccgcgagtccctgtgcgcacagccctcgcccgggcagccctgcgccctgctc
ctcgatgtcatcatcctgcctcagcgctacttcaggctggtcaaggtgcaggtcatcgtg
gaggacatcaacgacaacccaccccgcttcccgctggaccagctcagcctctccatcccg
gagaactccgagctgggagcccgcttcccggtagagccgtcagcggaggacgcagacgtc
ggggcgaacggcctgcagagctaccgcctgctcggctcccagggccgcttctccctgagc
acggagcgggctgaggacggccggctggtgccttggctggtggtcagggcagcgctggac
cgggagctggaggacgtgtacgggatgagcctggtcgccgaggacggcggctctccccgg
ctgtcgggcagcgtctccctcaccgtcaccatcaccgacatcaatgacaactgtcccgag
ttcacccggacccacctggacgtgaccgtcttggccaacaccacggtcggcaccagtctg
gctcagctccacaccaccgacccggacctgggccacaatgcccacaccgagtactcgtat
agcgaccgggtttccctgacgtccaggaagctgttcaggttggacaagatgtcgggggtc
atcaccttggcggcccccatccagagagacaccgccccggcccacaggttgaccgtcctg
gccaccggctcgggctgcatcccggtgatagcctttgtccagctgcgggtggtcaggctg
gggtccagtcccccagtggtgaccccccggtacatcgccctgcagtccgacggggtcgtg
tacctgaaggagacggagccggcgcccacgcccatcgcgttcttcaccgtcacggaccca
gaggaggaggaggaggagaagcaggaggtcaggtgttacctggaaggtgaggggccattc
cgcctggtgccttacctcacctttaaagacgagtatttgctggaaacctcgcagcccctg
gactatgagctgaagcggggatacgagctggcggtggtggctgagaacaccaagggcctg
accctgcggacacgcctcacggtgcagctcatagaccagaacgacaactctcccgccttc
accaactccctggtcgatgtgagcatcgaagaaaataacccccccgacacgttcctcatc
caactcaaggccaccgacgacgacagcgggaagatgggtgccatcgcttacaccctggag
cccgggtcgcctccctgcttcgccttagaccaggtgactggggtcttggcggtgtctgct
tccctggatcgggaagtgcgggaaaagtaccggctgatggtcagggcgacagacggcggg
tcacccgcccgggaatccacagccacggtcctcgtcaccgtcctggataagaacgacaac
aagccccgcttcatcaacaaggacttcagcttcttcgttcccgaaaacttcccaagtttc
ggcgagatcggcgtggtgggggtcaccgaccccgacgccgggagtaatggctggctggcc
ctgtccgtgctgaatggcagcgagcacttcgtcatcgacaccgggaaagggaacctcatg
gcgaaggtgcccttggacagggagcagcagagctcttacgtgctgtgggtccaggctatc
gatggggggaagcccgctctgtctgctgtggctcaggtcaccatccttctgctggatgtc
aatgacaacccacccgtggtcctgttcccacagtccaatctctctttcctcctggtgctt
ccatccactgcccccggctcctccatcaccgaggtgtacgccgtggataaggacacgggc
atgaacgcggtcatcgcttacaccatcattggcaggagaggaccccgtcccgagtccttc
ggcatcgacaccagcacagggaacatcaccttgcaagagtccctggtgaagagtgactgt
ggtttgtacaggttgctggtgaaagtcagcgatcacggctatccagagccactgcacagc
acagtcatcgtcaacctgtttgtcaatgaaacgttaagcaatgagagctacatagaaaac
ttactcaggaaagataccaacatcaggatagaagaaagtgtgcccgagacaagggtcgat
cctttccagacaaagttggaccaattcccgtgtcagggtgtgttgatagcattatcagcg
acatgttttggccttttgactgtgatgttttctttgatgtgctgtcttttcttgaaaaaa
aggaagcacaaaagtaacgattacaatgtcgcagaggttgagatcccattaaacaaatcg
attgcttcacactcactggagaagaaaccaatgaacgattccgatctgtaa
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