Callorhinchus milii (elephant shark): 103178631
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Entry
103178631 CDS
T03088
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103178631 (zc3h12b)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
103178631 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
103178631
NCBI-ProteinID:
XP_007891669
UniProt:
A0A4W3J1R5
LinkDB
All DBs
Position
Unknown
AA seq
901 aa
AA seq
DB search
MYDYILSLCSPEHKKCERLTATLRKQLIDLKDSIEYESQAVLEIKENTVEITGGQINVMT
AWSMLEKLSMETSSSKQNRRAHVEPGDCSAESEDWTSSESESEQILNRKKETETLNKPHR
QLCRSPCLERPILSKGCVLHDLPSQDSKSKPDDGCKTPNLDKEYQAKMDFALKLGYSGEQ
IQTVLNKLGSDALINDILAELVRLGNKSESEPQQSGLSSTGTLVSRGQCAKEITSPELSL
EDEVVDDSNNLRPIVIDGSNVAMSHGNKEVFSCLGIQLAVEWFLEKGHKDITVFVPAWRK
EQSRPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSEGIIVSND
NYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPVIPEHKKQ
PCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRASAKLSAVKTMSEGALAKCGIAITGV
KGEIGSEIKRVAPKRQSDPSIRSVACDPEERLERLTPARRLETNSVPSLVSATSVPAFQP
NKGHAAVGLSTRSASSPVPYSKQFTHQKSSQEQASSVHYPPILVTNSHGNSVNYTEPYPK
YDSLVDTGYCSMMSDFSNLSLNSMCNHENYYGLDSDHSMYTRNTSSHSDSCVTSNDSYSS
FGDLAYLGSVEGPEDNVKVHQPQAQSRLQPFIHGYHEPITRVQSYGPEEPKQPQRKQSIS
HLAPHMQHPSISARSSCPGDYPVPPNIHPSSANQPGRALVMTRLDSISDSRLYESNPMRQ
RRPPLCREQHTSWDHLPCVTDSYRYPSYPLTNNLMQPSYNPGMFRSMPEKIEQIWRSPWQ
GGTVDHRDHQTIQEHQYQTYRNLCNIFPADIVLAVMEKNPHVIDPQQLAAEIVAKQLRCG
R
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtatgattacatactatctctctgttcccctgaacataagaagtgtgagaggctaaca
gcaacgctgcggaaacaattgattgacttgaaggattccattgaatatgaaagccaagct
gtactggaaatcaaggagaacactgtagagataacaggaggacagattaacgtaatgaca
gcctggtctatgcttgagaagctgagtatggagactagttcctccaaacagaacaggcgc
gctcatgtagaaccaggcgactgcagcgctgaatccgaggactggacaagttctgagagt
gagtccgaacaaatcctcaacaggaagaaagagactgagaccctgaacaagccacatagg
cagctgtgccggtccccttgtctcgaacggcccattctctccaaaggttgtgtcctacat
gaccttcctagtcaggacagtaaatccaaacctgatgatgggtgcaagactcctaattta
gacaaggaataccaggcaaagatggattttgccttaaagctaggatattcaggagaacag
atacagaccgtgctcaacaaactaggttcagatgctctcatcaacgacattttagcagaa
cttgtcagacttgggaacaaaagtgaatctgagccacagcagagcgggctgagtagcaca
ggtactctcgtgtccaggggacagtgtgcgaaagaaatcacaagcccggagctgtctttg
gaagatgaagttgtggatgattcgaacaacctacgacccatcgtgattgatggaagcaac
gtggccatgagccatggaaacaaggaggtgttctcctgccttgggattcagctggccgtg
gaatggttcctggaaaaagggcataaagacatcacagtgtttgttcctgcctggaggaaa
gagcagtccaggccggatgcacccattacagatcaagaaatattgcgtaagcttgagaag
gagaaaattctggtcttcaccccatctcgtcgggtgcaaggaaggagagtggtgtgttat
gatgatcggttcatagtcaagttggctttcgactccgaaggcattattgtgtcaaatgac
aactacagggacttgcagaacgagaagcctgagtggaagaaattcatcgaggaacgtctt
ctaatgtattcgtttgtgaatgacaagttcatgccacccgatgatcctttgggacgtcat
ggtccaagcttggataacttcctacgaaaacgccctgttattccagaacacaagaagcaa
ccctgcccgtatggaaagaagtgcacgtatggacacaaatgtaaatactaccatccagaa
cgtgttaaccagccacagagatcagtagccgatgagctccgtgccagtgcaaagctgtct
gccgtaaaaaccatgagcgaaggagccctggctaagtgcgggattgccataactggggtc
aaaggggaaatcggctctgaaatcaagcgcgtcgctccaaagcgccagtctgacccaagc
atccggtctgtcgcctgcgacccagaggagaggttggagaggctaacgccagcccgcaga
ctggagaccaactccgtgccttctttggtctctgcaacaagtgttccggcgtttcagccc
aacaaaggccatgcagccgtcggcctgagcaccaggtcggccagcagcccagtgccgtat
tctaagcaatttacccatcagaaatcctcacaagagcaggcgtccagtgtgcattatccg
cccattctcgtaaccaacagtcacgggaattccgtgaactatacggaaccctatcctaaa
tacgattcgcttgtggacactggctattgctccatgatgagtgacttttcaaacttaagc
ttaaacagtatgtgtaaccacgagaattattatggtctggattcagaccacagtatgtat
accaggaacacgagctctcactcagactcctgcgtcacaagcaacgactcctattcctct
tttggcgacttggcgtacctgggctctgtagaaggtccagaggacaatgtgaaagtccat
cagccccaggcgcagagcaggctgcagccctttattcatggctatcatgaacctataaca
agagtgcagagttatggacccgaggagccaaagcagccccagcgcaaacaatccatctcc
catctagctcctcacatgcaacatccctccattagtgctcgctccagttgtcctggggac
taccctgttcctccaaacattcacccatcttctgctaaccagccaggccgggctctggtg
atgactaggctggacagtatttctgattctcgactgtacgagagcaacccaatgaggcag
agaagacctcctctatgccgggaacaacataccagctgggaccacctgccgtgcgtcaca
gattcctacagatacccttcgtatccgttgactaataatctcatgcagccctcttataac
cccggaatgttccggagcatgccggagaagatcgagcagatctggcggtcgccatggcag
ggggggactgtcgaccaccgagatcaccagaccatccaggaacaccagtaccagacgtat
cgtaacctgtgtaacatcttcccagcggatattgtcctcgctgtgatggagaagaacccc
cacgtaatcgatccacagcagctggctgcagagatcgtggccaagcagttgcgttgtgga
cggtag
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