Callorhinchus milii (elephant shark): 103178648
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Entry
103178648 CDS
T03088
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmk04515
]
103178648
Cell adhesion molecules [BR:
cmk04515
]
Cadherins
Protocadherins
103178648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
103178648
NCBI-ProteinID:
XP_042190031
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
MDPDRDDCETHFIWAKGGLDICVASTCLWITTPPPRVCAPAPLPRSGLRSLLLLLSVVSA
ADGKTFRYSIYEEEVPGTVIGNLAEDAQITAADDDLRSSFRPMQKLNASLIQVGESAGDL
TIGGRIDREQICRDTSPCLIAFDVVNFSRETFKLLHVEVEVRDINDNAPEFPNSEMSVQI
SESSALGTRIPLEVAVDADVGDNYLQNYAISANSHFSLEMQTRSDGVKCADLVLVQALDR
ESQAHLTLELSAQDGGHPPEVGRAKVQVEVLDWNDNSPEFVQKSFLVELHEDAPVGFLLL
HLEAVDPDQGLNGQVVYGFSPHLSPEVRQLFRVDAKSGRLTLEGAVDYESRKTYELDVQG
RDLGPNSIPANCKVTVNILDVNDNAPEIAITPMTSVSSGVAYITEAAAKDSFVALIGTSD
SDSGSNGQVSCTLYGHDHFKLQQAYADSYMIVTTAALDRERIGEYNLTVVAEDLGSPPYK
SIRQYTIRLSDVNDNAPSFSKAIYQVSVLENNAPGAYITTVVARDPDLGANGQVGYRLVD
TQVLGTPVSALVSVDPTTGAIYALRSLDRERLEELELRMEASDGGSPQLSSSALIQLRVA
DQNDNAPVVTHPVPSNRSATVLLPSNAPSGYLATRIRARDADEGLNSQLTYGLLRGSPRX
LFTANSVTGEIFLNRLLSKDRPPALKIIVAVHDNGRPSLSSTVTVSFVVRPPAPPGSQEL
VIRSSAQTQRPWDISSIIIMFLGGGCVVLMMAIIGVSATCHKSTKAGKHSDSSFGTKCHI
SQLEARRNQDDRLMKISEPDQLKIVDMQPNSSSEFSLTNESEDCESAGVVGSIEGEEGVC
LLEADHKVPSYNVESFLPESALNHGTFLEVAVQQGRGFLDPVQDGFSGKDSGKGDSDFND
SDSDISGDGIRKGNMSMEQRQNGLLPCLKENQTLGSHPEPYYRLAAQATDISKLSPQFKQ
SYMIAYSTVPATFLHSTCGKTTSLPQDHPLNYTCQYGHLPKSGALQISQRVFPRESGRTM
IFPHPPEVRHNEVTEISSSVHIVPGSRCHQNYVNRTISEVATSF
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggatccagaccgcgatgattgtgaaacacattttatttgggcaaaagggggacttgac
atttgtgtcgcttcaacgtgtctgtggatcacgacgccccccccccgggtgtgtgctcct
gccccgctgccccgctccgggctccgctccctgttgctgctcctgtccgtcgtgtccgcc
gccgacggcaaaaccttcaggtactcgatctacgaggaggaggtcccgggcactgtgatc
ggaaacttggccgaagacgcgcagataaccgcagccgatgatgatctgcggagcagtttc
cgaccgatgcagaagctcaacgcgtctttgatccaagtgggagagagtgcgggcgacctg
accatcgggggccgtatcgaccgggagcagatctgtcgggacacgtcgccctgtctgatc
gctttcgatgtggtcaacttttccagagagacctttaaactgctccacgtggaggtcgag
gtcagagacatcaacgacaacgcgcccgagttccccaactccgagatgtcggtgcagatc
tccgagagctcagcgctcgggacccgaatccctctcgaggtcgcggtcgacgccgatgtc
ggcgacaattatctgcaaaactacgccatttctgccaacagccacttcagcctcgagatg
caaacccggagcgatggcgtcaagtgcgccgacctggtgctggtccaagccctcgaccgg
gaaagtcaggctcacctgacactagagctgtccgcacaggacgggggccatccccctgag
gtgggaagagctaaggtccaggtcgaggttctggactggaacgacaacagccccgagttt
gtgcagaagtccttcctggtggagctccatgaagatgctccggtgggtttcctgctgctg
cacctggaggccgtggaccctgaccaggggctgaacggacaggtggtctatggcttcagc
cctcacctctcgcctgaggttcgacaactctttcgagtcgatgccaagtctggccgtttg
accctggagggggccgtcgactacgaaagcagaaaaacgtacgagttggatgttcaaggt
cgcgatctgggtcccaactccatccccgccaactgcaaggtcaccgtcaacatcctggac
gtgaacgacaacgccccggagatcgccatcacccccatgacctccgtcagctccggagtc
gcctacatcaccgaggccgccgccaaagacagcttcgtggctctgatcggcacctcggac
agcgactcgggctccaacggccaagtgtcttgtactctgtacggacacgatcacttcaag
ctgcagcaagcgtatgccgacagctacatgatcgtcaccacggcggctctggaccgcgag
aggatcggggaatataacctgactgtggtggccgaggacctgggctcccctccctacaag
agcatcaggcagtacaccatccgcctgagcgacgtgaacgacaacgccccctctttctcc
aaagccatctaccaagtgtccgtcctggagaacaacgcgccgggggcttacatcaccacc
gtggtggcccgcgatcccgatctgggtgccaacgggcaggtcgggtaccgtctggtggac
acgcaggtcctggggacccccgtctccgctctggtgtctgtggacccgaccactggggcc
atctatgcgctgcgctcgctggaccgggagcggctggaggagttggagctgcggatggag
gcgagtgacggcggctccccacagctcagcagttcagcgctcatccagctgagggtcgcc
gatcagaacgataacgctcctgtcgtcacccaccccgtccctagcaaccgctctgcgaca
gtgctgctgcctagcaacgcaccatccggttacctggcaacacgcatccgcgctcgggac
gctgacgaggggctgaattctcagctgacgtacggactcctgcgggggagcccccggngg
ctcttcactgccaacagcgtgaccggggagatcttcctcaacagactcctcagcaaagac
aggccgcccgccctcaagatcatcgtggctgttcacgacaacggccgaccatcgctgtcc
tccacagtcaccgtcagctttgttgtgaggccaccagcacctcccggcagccaagagctt
gtcatccgcagctctgcccaaacacagcggccctgggacatctcctccatcatcatcatg
ttcctcggtggaggctgtgttgtgttaatgatggcaattattggagtgtcggcgacttgc
cataaaagtactaaggcaggcaaacatagtgacagttcatttgggactaaatgtcacatt
tctcagctagaagcaagaagaaaccaagatgacaggctgatgaaaatcagtgagccagat
caactgaaaattgttgacatgcagccaaattcatcttctgaattttctttgacaaatgaa
tcggaagattgtgaaagtgcaggagttgtaggatcaatagagggggaagagggtgtttgt
ctactggaagcagatcataaagtcccaagctataatgtggagagctttttaccagaatct
gctcttaatcatggaactttccttgaagttgctgtccaacaaggcagaggctttctagat
ccagttcaagatggatttagtggaaaggacagcggtaaaggggacagtgacttcaatgac
agtgattctgatataagtggcgatggaataagaaaaggaaacatgtcaatggaacaaaga
cagaatggtctattaccttgtcttaaggaaaaccaaactcttggttctcatccagaacca
tattacaggctagccgctcaggcaacagatattagtaaactctctccccagtttaaacag
agctatatgattgcttattcaacagtacctgctaccttcctgcactctacatgtggcaaa
accacttcacttcctcaagatcatccattgaattacacatgtcaatatggacacttacca
aaatcaggagcactgcagatttctcaaagagtttttcccagagaatctggaagaacaatg
atttttccccatccaccagaagtgagacacaatgaagtgactgaaattagttcgtctgta
catattgtcccaggatctagatgtcaccagaactatgtgaacagaacaatctcagaggtg
gctacttctttttga
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integrated database retrieval system
