Callorhinchus milii (elephant shark): 103178705
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Entry
103178705 CDS
T03088
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmk01002
]
103178705 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103178705 (usp42)
Enzymes [BR:
cmk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103178705 (usp42)
Peptidases and inhibitors [BR:
cmk01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103178705 (usp42)
Ubiquitin system [BR:
cmk04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103178705 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
103178705
NCBI-ProteinID:
XP_007891767
UniProt:
A0A4W3HC25
LinkDB
All DBs
Position
Unknown
AA seq
1546 aa
AA seq
DB search
MTIVDKVSETSNIASCKNRTCSSVAPFSGLVKEKIMESGSAGWVATSPVTEVTKNKMSLG
SIPGAALYSSAVCVQEKPKQPVQKDQSVMGIGDGIAPPQKILFPAEKISLKWQQMHKIGA
GLQNLGNTCFLNSALQCLTYTPPLANYMLSREHSRTCNEQGFCMMCTMQTHITQVFSSSG
NVIKPMAVINDLRRIAKHFRFGNQEDAHEFLRYTVDALQKACLNGSNKLDRQTQATTLIY
QIFGGYLRSRVKCLNCKGVSDTYDPYLDIALEIKTAPNITKALEQFVKPEQLDGENAYKC
TKCKKMVPASKRFTIHRPSNVLTLSLKRFANFTGGKITKDVRYSEFLDVRPYMSQSSGEP
VVYVLYAVLVHSGFSCHAGHYYCYIKASNGQWYQMNDSIVSSSDIRSVLNQQAYVLFYIR
SHDSKNGAEHSHPHLGQSSPRPPVSQRLTANQTGFIGPQLPPHVTKNSNHLTNGNCSVKE
VPSSAVPSTSSTSGIRNISTPSGSPQSRSLPRPSVIPEPSKRQKLSFSIQTPKQGTRQGQ
NQTSLHTSPLENLYKPSVSHTNVSQSTSGTLPTSTPAKSAPATSIPPSSAASTSTASAST
SSVAEASTSSAASTSSAAEAATASTSPAASTSATASTSTAAEASTSAIVSTSTTATASRS
ATASTSAVAASTSAAAPKPVTSNSSHLMVNGQSKGSSGSASSLVPYNEESSEESDEEPKG
LVKENGYVKTVNGTVNGTGSSVHLKPISTYIDAKDENFHSETVGAKNNAVRRMGDHGKNR
QMCESIVSPVQSMNCSANGLSTITGSHTNEACPVSLRANTKKILQNCSAGCAKQESCTKQ
EIRANVNENHLLMHAKAPSAVNHCGGGGDADTVRVHTVEKQANLPVCPLKEVTDALSVPS
TPGPIQKKNCESKSRNNEESHLVSSNPSRQSLVTNVKIKLENNDIEKPKEERLNPSQVRE
LVPIVDHETNGHNGQKIERFDQEKSALSVIEDVSSAHQTNADKVETLERESQPSVQQSPA
KEKTRQASENKSSEKDELCIEKLESGIRERNNQNKSRKADENGRLLDRDQYPGREGISQV
RQRMSEQQTTDLAKLPVEESSNQDQNKISENYGTGRDLILPANRGKAGQEENRFQEESSP
IVQKKLESKEKTNAVNSRILQNDKSDSNYRHRSREHKDSRWSQTEREPEKPANHNYSSRA
YKQEYYQEKRIDKYKARDNGHPVEDGKGYRRSKLDSQSFNHSHRREDKISREKQHTLDFS
GRTLNKEINHSCQERKWERKRKHSSSENGESDVDKKRKKLLCDPSLEERRIKKHKKSKKK
KASKDKRRERDHKHQSLDSSEVNSEADERKRRKKKKKKKKRHHNDKDVHYHSRKHQEIPS
ANKKSDILSDSERIHKSTRSLCSEDRIMHSHKQQAYEENKVSPKAKFGHLDTKQNSCYVD
YVHSKEETLNVHNGNSNRHLVNCVGSGSLTVHQSDWSRLRLENGSDQHKPISKQDKEHFR
ERHYSHNYNKEYSEKDSRRDLTSGSSFRDSTRWKTGEKRHEEQKAH
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgataaagtttcagagacctcaaacattgcatcttgcaagaatcggacc
tgcagctctgtggcacctttctctggactagtcaaagagaaaatcatggagtctgggtca
gcaggttgggttgccacatctcctgttacagaagtaacaaagaataaaatgtctttagga
tccatacctggagcagcattgtattccagtgcagtgtgtgtgcaagagaaacccaagcag
ccagtacagaaagatcaaagtgtgatgggcattggcgatggaattgcacccccacagaaa
atactatttccagcagagaaaatatccttgaagtggcagcaaatgcataaaataggagct
ggcctccaaaacctaggcaacacctgcttcctaaactccgcactacagtgtttgacctac
acgccacctcttgcaaactacatgctgtctcgcgaacactcaagaacatgtaatgagcaa
ggattctgtatgatgtgtacgatgcagactcatattactcaagtcttttccagctctgga
aatgtcatcaaacctatggctgtcattaatgacctccgacgaatagcaaaacattttcga
tttggaaaccaggaagatgcccatgaatttctgcgctacactgttgatgctctccagaaa
gcatgcttaaatggaagcaacaaattagatcgacaaactcaagctactacgctgatttat
cagatttttggaggttacctgaggtcaagagtaaaatgtttgaactgcaagggagtttct
gacacatatgacccatatctggatattgccctggaaataaagaccgcaccaaacatcaca
aaagccctagaacagtttgtaaagcctgaacagctggatggtgaaaatgcttacaaatgc
accaagtgcaagaaaatggtaccagcttctaagcgattcacgattcaccgaccatcaaat
gtgttgacactctctctaaaacgctttgctaactttactggtggaaagattacaaaggat
gtgaggtactctgaatttctggatgttcgaccctatatgtctcagtcaagtggagagcca
gtagtgtatgtactatatgcagtacttgtacattcagggttcagctgccatgctgggcat
tactactgctacataaaggccagtaacgggcagtggtaccagatgaacgattcgattgta
tcctcaagtgacatcagatcggtgttaaaccaacaggcctatgtactgttttatatcaga
tctcatgactcaaaaaatggagcagaacattctcaccctcatttaggccagtcatctcca
agaccacctgttagtcagcgattaactgctaaccaaactggttttattggaccacagctt
ccaccacacgtgaccaagaactcaaaccacttaacgaatggaaactgctcagtgaaggag
gttcccagcagcgcagtcccgagcacgagcagcacaagtggtatcaggaacatttctact
ccttccgggtcccctcagagtcggtcgctgcccagaccatcagtgattcctgaaccttcc
aaacggcagaagctgtccttcagtatacagactcctaagcaggggacaaggcaaggccag
aatcagaccagccttcatactagtccactggagaatttgtacaaacctagtgtatcccat
actaatgtgtctcagtctacctcaggaactctaccaacatcaactccagcaaaatcagct
ccagcaacttcaattccaccatcatctgctgcgtccacatctactgcttctgcctccaca
tcttctgttgctgaagcctccacatcttctgcagcctccacatcttctgctgctgaagcc
gccacagcttccacatctcctgcagcttccacatctgccacagcttccacatctactgct
gctgaagcctccacatctgccatagtctccacatctactaccgccacagcctccaggtct
gccactgcctctacatctgctgttgctgcctccacatctgctgcagcgcctaagccagta
acatccaactcttctcacttaatggtgaatggtcagtcaaaaggatcttctggatccgct
agttctttagtcccttataatgaggaatcttcagaagaatccgacgaggaacctaaaggc
ttggttaaggaaaatggttatgtgaagactgtgaacggaacggttaatggaactggatcc
agtgtacatctcaaaccaatctctacatatatagatgctaaagatgaaaatttccattct
gagacagtcggagcaaaaaataatgcagttaggagaatgggagatcatggaaagaatcgt
cagatgtgtgaatccattgtttctccagtccagtctatgaattgttctgcaaatggtttg
tctactataacaggatcacatactaatgaagcttgtcctgtttcactgcgtgcaaacact
aaaaagatactgcagaattgttcagcaggctgcgcaaaacaagagagctgcactaaacaa
gaaatccgggcaaatgtgaatgaaaaccacttgctgatgcatgcaaaggcaccttctgca
gtgaatcattgtggtggtggtggtgatgcggatacagtccgtgtacatacagttgagaaa
caagcaaacctgccagtctgtccactaaaagaagtcactgatgctctatctgtaccatcc
acacctggtcccattcaaaaaaagaattgtgaaagtaaaagcagaaataatgaagagtcc
catcttgttagcagcaatcctagcaggcaaagtcttgttactaatgtaaagataaaatta
gaaaataatgatattgagaagccaaaagaagaaagattaaatcctagtcaggttagggag
ttggtaccgattgttgaccatgagactaatggacacaatggtcagaaaatagagagattt
gatcaggaaaaaagtgcattatcagtaattgaagatgtcagcagtgctcatcaaactaat
gctgacaaggtggaaactttggaaagagaaagccaacctagtgtgcagcagtctcctgct
aaggaaaagaccagacaagccagtgaaaacaagtcatcagaaaaggatgagctttgcatt
gaaaaacttgaatctggcattagagaaaggaacaatcaaaacaaaagtaggaaggctgat
gaaaatggtcgacttcttgaccgtgatcaatatccaggaagggagggaatcagtcaagtt
agacagaggatgtcagagcagcagaccactgacctagccaaattgcccgttgaggaaagt
tctaatcaagatcaaaacaaaatttcagaaaattacggcacgggcagagatttaattctg
cctgcaaataggggtaaggctggtcaagaagaaaaccgatttcaagaggagagctctcct
attgtccaaaaaaaattggaaagtaaggaaaagactaatgcggtcaatagtagaatttta
caaaatgataaaagtgattccaattataggcacagatctagagaacacaaggatagccga
tggtctcaaactgaaagggagcctgaaaaaccagcaaaccataactacagcagtcgagcc
tataaacaagaatattatcaggagaaacgaattgacaaatataaagctagagataatgga
catccagtcgaggatggaaagggctaccggcgctcaaagcttgactcacagtcatttaat
cattctcatcgtcgtgaagacaagatctccagagaaaagcaacatactttggactttagt
ggaaggactttgaataaggagattaaccacagttgtcaagaaagaaaatgggagcggaag
aggaaacatagcagcagtgagaatggtgaaagtgacgtcgacaagaaacgcaaaaaactc
ttgtgtgatccatctttggaggagcgaaggataaaaaagcataagaaatcaaagaagaag
aaggcatcaaaagacaaacgcagagaaagggaccacaagcatcagtctttggactcatcc
gaagtaaactctgaagctgatgaaaggaaacgtaggaaaaagaagaaaaagaagaagaaa
aggcatcacaatgacaaagacgtccattaccattccagaaagcaccaggagattccatca
gctaacaagaagagtgatatcctaagcgattctgaaaggattcacaagtccactcgaagc
ctttgttctgaagatcggataatgcacagtcacaaacaacaagcatatgaagagaacaag
gtgtcaccgaaagcaaaatttgggcatttggacaccaagcaaaacagttgctacgtagac
tatgtccacagcaaagaagaaacgttgaatgtgcataatggaaattcaaatcggcatctt
gtgaactgtgttggatcgggctctctcactgtacaccagagtgactggtccaggctgagg
ctagaaaatggcagtgaccaacataaaccgatttcaaagcaggataaagaacacttccga
gaaaggcattattcgcacaattacaacaaggaatacagtgaaaaggacagcagacgagac
ttgacgagtggtagttctttcagagattcgacaagatggaagactggtgaaaagagacat
gaagaacagaaggcccactaa
DBGET
integrated database retrieval system
