Callorhinchus milii (elephant shark): 103178778
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Entry
103178778 CDS
T03088
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103178778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103178778
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103178778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
103178778
NCBI-ProteinID:
XP_007891897
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MAAQNGGGEDEHGDEDDSDSDSDDDDVKVTIGNIKTQYMGTPMNLNLKTGRPYGSSVTAK
LHHRGIDLDTSGNINGLPVIEVDMELFEDKPWRKPGADQSDYFNYGFNEETWKSYCEKQR
RLQLGLDPILPSGSESKISVQQGRTGNAEKDTENIVVKPDFKSEFTSPPGVRMKAGPPPN
RKLAGTIDVIGGHTGPIRRVEGRRRDKHGGDESAIQVLGDHGNKRPPFGPPTGPPPPPMP
GPPPHFLNPPPPTSAGPPPMHPPGMPPPGPLPGLFPPPMPPPPSLMLPSMDGGPPTNYDN
RPPPPFAFATPDSGLIGYPPISTSHAPWVTTADKGVNNPMGHWDYPPGPRREREQREREH
ERDRTPTTNDYPNEDERYRIYSRERNYERDYHRSRERSREREERHRERRHRDKDETKHKS
SRRKQHENEEGESHRRHKHKKNKRSKEDKEATEESVAETEETEPKE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacaaaatggcgggggtgaagatgaacatggtgacgaagatgacagcgatagc
gacagtgatgatgatgatgtgaaggtcaccatcggcaacattaaaacacagtatatggga
actccaatgaacctgaatctgaagactggccgtccgtatggatcttccgtgacggcaaag
ctgcaccacagaggcattgacctggacacctctgggaatatcaatgggctcccagtgatt
gaggtggatatggaattatttgaggacaagccttggagaaagcctggagccgatcaatcc
gactattttaactatggcttcaatgaagagacttggaaatcttattgtgagaaacagcga
agacttcagctaggattggatcccatacttccatctggttcagagagcaaaatatcggta
cagcagggcaggacgggcaatgcagagaaagacacagaaaacattgtggtgaaaccagac
ttcaagagtgaatttacatctccacccggggtccggatgaaggccggtccacctccgaat
aggaaacttgctgggacaattgatgtaattggcgggcacacgggccctatcaggagggta
gaaggaaggcgtcgagacaaacatggaggcgatgagagtgcaattcaggttcttggagac
catggaaataaaagaccgccatttgggcccccgactggcccccctccccctccaatgcca
ggacctccccctcacttcctgaaccctccccctcccacctcggctggcccaccccccatg
cacccgccaggaatgcctccacccggacctctgccagggctgtttccgcctcccatgcca
cctcctccatcgttaatgctgccatcgatggatgggggcccacctaccaactatgacaac
agacccccacctccattcgcattcgccaccccagactccggcctgatcggctaccctcct
atctccacgtcacatgctccctgggtcaccaccgctgacaagggcgtgaacaaccctatg
ggtcactgggattaccccccgggtccccggcgagagagagaacaacgcgagagggagcac
gaacgagatcgcacgcccacaacgaatgactaccccaatgaagatgagcgctatcgtatc
tacagcagagagcggaactatgagcgggattatcaccggagcagagaacgcagcagggag
cgggaggaacgtcaccgagagcggaggcacagggacaaggacgagaccaagcacaagtca
tctcgacgcaaacagcacgagaacgaggagggggagagtcaccggcggcataaacacaag
aagaataagcgaagcaaggaggataaagaagcaaccgaggaaagtgtggcggagacagag
gaaactgagcctaaagaatga
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