Callorhinchus milii (elephant shark): 103178858
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Entry
103178858 CDS
T03088
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103178858 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103178858 (atrx)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103178858 (atrx)
Transcription factors [BR:
cmk03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
103178858 (atrx)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
103178858 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
103178858
NCBI-ProteinID:
XP_042196672
LinkDB
All DBs
Position
Unknown
AA seq
2621 aa
AA seq
DB search
MTAEPTSENKLNTLVQKLHEYLAHSTEQGEEAPASPKQRQNKFLDKETVISVADMEHKKE
ASSQKSKSLGSSRSRRKPSVVTKHVSEDEISNENTSDCENSKTKDTEDDLDVTSLPKGTV
VVQPEPVWNEDKDNFRGPEFRSRSSKNKMETSKKRGGRESALQDENLHGIVSCTACGQQV
NHFQKDSVQRHHALKVLICKNCHKYYLSDDISQDSDGMDEQCRWCAEGGNLICCDFCHNA
FCKSCILRNLGRKELSNIMDENKKWYCYVCNPEPLLDLVTACDSVFECLDQLWQQNKKKK
DLDKLKPDGDKCKSPGPHDSDKSADLEYKNSRKGDSTSNCNGQKKNLGSLKNTLSGSGAI
TYSYKALKVPKEILKKARKLIDTSANLNVSFVNFLKQQELNETETSTKMRQLKAFKSVLG
DLKKVHLALEEAVDVEIQDFELQQNKKPEQSLRESIKKTEIENSNNSSDESPEDGVPENS
MEPASDQMDAVSANEGQQKVLSEQVDKLLDSKMLEEADAEDLQEISAEHESDQMDVSTVS
ETPGKTEDQQKRSPKQFDKLKLDSKLIAANSDSPLDQLLDNREETDAVCEISPLGLDSEM
TEAVLLNTLDVAMDMGSVSSLTEGLFEASDSLLPDLDAADNSASNSTVPDATSAKVPVES
PNHSGRSSEIDSDSSLRTHPKINHKLFIKLTPISPKTCKKVLGKKTSATKSKWSGAKRDT
RIGDDKNGKTGVGDGNVSDNAKVGGARDVDGSNASDEGVGDGSDAEVGDSSVAGGGSISD
VELGDGSVGGVGEDGIGGGGVNIGEDSVAGEASGEGSYAGEGEGSVEGEGSAAAEGSAEG
EGSVAGDGSVAGLGSVAGDGSVAGDGSVAGDGSVAGDGSVAGDGSVAGDGSVAGDGSEVG
EGSVEGEGSAIAEGKGSVQGEGSVVGDGSVVGSLVSDGEVADASTDGDTGVGDGEAEDGS
TDRDAAVGDVSNGSDAGVGSDGDKEDGDAASNCDGSGEADNVEDGLTKETRKGRTQKGKV
KISKKKKKSSKERVTGEEDPENDAGNDASVLSEKADVRRSPRIKTTPLRRQGGAGIVSSR
YEEDTDHSNHAGVGKKSRKVTRQSKDKEKVDTSGKARTKRTRESSKNAKSEMEGSDSDKT
GKMYKPAEETTTDSDEVPEVLKKAGVKSESSSDDEDSAQKTIRKTSLFGLRKRLQQASSN
ETQKRKRKTSSSSSDISGKERKRTSKRISVASKKRQRCSDSSNYDSELEKEIKNLSKVSA
AKKSSSKKGKKRVAEEDADSSSKDEEKVKKKKSHKEKMAISKRKKIAAKKEQSSSSPPSS
SGGDEEADEDNQDLAGDESNDEQKIQPITENVMIASGSKFCQSSGDEVEGQSQNVTHCAS
DEYDDDPENRIAKKMLLAEISANLSSGQDGSSDEESEEEKKKSDRKKEDNENDEEDEEAE
ADSDSDSDFEMTKKPRYRHRLLRHKLTMSDGESGNEKKGTKAKEGNKEGTRKTRRKDSSN
EDTTDQESDSDFKETGSSEEEEEEEEESESDGKRKRPRTRASKKEAEENQRSYLQKKKRR
RIKVQDSSSDKSKSNESGDGGDDEDDNDDSKSPGKGRKKIRKILKNDKLRTETKNALKEE
EDRRKRIADREKERETLREVVVVGDTSPVKCPITTKLVLEEDKETKECVVQVHRNLVRKL
KPHQVDGVQFMWDCCCESVEKSLKEEGSGCILAHCMGLGKTLQVVTFLHTMLLSEKLDFT
NALIVCPLNTVLNWVNEFSKWQEGLDDDESLEVNELATVKRPQERSYMLERWAEDGGIMI
LGYEMYRNLVLGRNVKSKKIKEIFQRTLANPGPDFVICDEGHILKNEASAISKAMNSINT
RRRIILTGTPLQNNLVEYHCMVNFIKENLLGSIKEFRNRFMNPIQNGQCADSTLVDVRVM
KKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLSVRMMPIQCKLYQFYLDHFTGVGAN
SEGRGKTGTRLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDESSMS
LTSEEDKRKKKKGKRGKKDDSSSRESGSDNNVEVIKVWNSRSRGGGGEASREAPPVVETP
PIKPEEVKPPNTSNPGSPAADWYKGFITDADAEILGHSGKMQLLFEILRMAEEIGEKVLV
FSQSLISLDLIEDFLELSNRARTEKSGDDKDSWKWYRNIDYYRMDGSTSAQTRKKWAEEF
NDESNPRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQIKPVFV
YRFLAQGTMEEKIYDRQVTKQSLSFRVVDQQQIERHFTMNELTELYTFEPDQLDDPNSEK
KKKXDTPVLPKDHILAELLQQQKDYLVGYHEHDSLLDHKEEEELSEEDRKAAWSEYEAEK
KGLSMRTNVAPGINFAAANFGMLPAHFPFNIATLSTLSNQQLEDLINQGREKVVEASTSI
ATVRSEPLEDLIAQLWKENPNFNEAQVQAVALSKQASQELEIKRREAMYNDILSKQQLLI
RSVQQILMSRRQQFNQLAAQQQQQYSLQRSTLLNQYMSQRNASPMLSYPHMGMRGFPHGY
PQAAAGMQPPPLQRAPPTSMQMKGKSPGPPQLKQGMKNSKN
NT seq
7866 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagagccgacgagtgaaaacaagcttaatacattggtgcagaaacttcatgag
tatctggctcattcaacagaacaaggcgaagaagctccggcctctccaaagcagcgtcag
aacaagtttttagataaagaaactgttatcagtgttgccgatatggagcataaaaaagag
gcctccagtcaaaaatcgaagtctttgggatcatcccgctcaagaaggaaaccctcagtt
gtcacgaaacacgtgtcggaggatgagatctcgaatgagaatacttcagattgtgaaaat
tcaaagactaaagatacagaagatgatttagatgtgactagtttgccaaaaggcacagta
gttgtacagccagaaccggtatggaatgaagacaaagataactttcgaggacctgaattt
agaagcagaagttcaaagaacaaaatggagacctcgaagaagcgtggaggtagggaaagt
gcactgcaagatgaaaacctgcatggaatagtcagctgtacagcttgcgggcagcaggtg
aaccattttcaaaaggattcagttcagagacatcatgcactcaaagttctcatctgtaag
aactgccataaatattacctgagtgacgacataagccaagattcagatggtatggatgaa
caatgcaggtggtgtgctgaaggtggaaatttgatttgttgtgatttttgccacaatgca
ttctgcaaaagctgcatcttgcggaacctaggcaggaaggagctgtccaatataatggat
gaaaacaaaaagtggtactgctatgtgtgcaatccagagcctttattggatttggttaca
gcttgtgatagtgtgtttgagtgtcttgatcaattgtggcagcaaaacaaaaagaagaaa
gatcttgataaactgaaaccagacggtgataaatgtaaatctccgggaccgcatgatagt
gacaagtctgcagatcttgaatataaaaattctcggaaaggagattccacatcaaattgc
aatggacagaaaaaaaatttgggttcattaaaaaacaccttgtcgggatctggagcaatt
acatactcgtacaaggcgctgaaagtgccgaaagaaattctgaagaaggcccgtaagctg
attgatacttctgccaacttgaatgtcagttttgttaactttttaaagcaacaggagtta
aatgagactgagactagcacgaagatgagacagctaaaggctttcaagtctgtgcttggt
gatttaaagaaagtccatctggcgctagaggaagctgtggatgttgagattcaggacttt
gaattgcaacagaataagaaaccggagcagtcgttgcgagagagtattaaaaaaactgaa
atcgagaattctaataacagtagtgatgaatctcctgaagacggagttccagagaactca
atggaacctgcatctgatcagatggatgctgtttcagctaatgaagggcaacagaaagtg
ttgtccgagcaggttgataagttattggactcaaaaatgctggaagaggcagatgcagag
gatttgcaggaaatttcagcagagcatgaatctgatcagatggatgtgtccactgtttct
gaaacaccagggaaaactgaagaccaacagaaaagatcgcctaagcagtttgataaatta
aagctggattcaaaactgattgctgcaaattcggacagtccattagatcagctgttggac
aacagggaagaaactgatgctgtttgtgaaatttcacctctgggactagattctgaaatg
acagaagcagtattacttaatactttagatgtagccatggacatgggttcagtttcttcg
ttgactgaaggcttgtttgaagcaagtgactctttgctaccagatctcgatgcagccgat
aattctgcaagcaacagcactgtacccgatgctacatcagctaaggtacctgttgaaagt
ccaaatcattctggaagatcttcagaaattgattctgattccagtttaagaacccatcct
aagataaaccataagctttttataaaattaactccgatttcccctaaaacctgcaagaaa
gtgttagggaagaaaacctctgccaccaagagtaaatggagtggtgctaaaagagataca
agaattggagatgacaaaaatggtaagacaggggttggagatggcaacgttagtgataat
gcaaaagttggaggtgcaagggatgtggatggcagcaatgccagtgatgaaggagtgggt
gatggcagtgatgcagaagtcggagatagcagtgtggctgggggtggcagtattagtgat
gtggagcttggagacggcagtgttggtggtgttggagaggacggtataggcggtggtggc
gttaacattggagaggacagtgttgcgggcgaggccagtggtgagggcagctatgctggc
gagggtgagggcagtgttgagggtgagggcagtgcagctgccgagggcagtgctgagggt
gagggcagtgtcgctggagatggcagtgtcgctggacttggcagtgtcgctggagatggc
agtgtcgctggagatggcagtgtcgctggagatggcagtgtcgctggagatggcagtgtc
gctggagatggcagtgtcgctggagatggcagtgtcgctggagatggcagtgaggttggc
gagggcagtgttgagggcgagggcagtgccattgccgagggtaaaggcagtgttcagggt
gaaggcagcgtggttggtgatggcagtgttgtcggtagtctggtcagtgacggagaggtt
gctgatgccagtactgatggtgatacaggagttggagatggagaagctgaagatggcagt
actgatagggatgcagcagttggtgacgttagtaacgggagtgatgcaggagttggcagt
gatggggacaaggaggatggtgatgcagctagcaattgtgacgggagcggagaggctgat
aatgttgaggatggcttgacgaaagaaacacgaaaaggtagaactcaaaagggcaaagtg
aaaatctccaaaaagaaaaaaaaatcgagcaaagaacgagtaactggagaagaagatcct
gaaaatgacgctggaaatgatgcttcagttctatccgagaaggctgatgttagaaggtca
cctcgaataaaaactacacctctaaggcgtcaaggtggtgcaggaattgtaagttctaga
tatgaagaagacactgaccacagtaaccatgctggtgttggtaaaaagtctaggaaagtg
acaaggcaatctaaggacaaagaaaaagtggacacttcagggaaagcgaggaccaaacga
accagggaatccagtaaaaatgcaaaatctgaaatggaaggatctgattctgataaaacg
ggcaagatgtataaacccgctgaggaaactaccaccgactctgatgaggtcccggaagta
ttgaaaaaggccggagtgaagagcgaaagttcatccgatgatgaagattcggcccagaaa
acaattagaaaaaccagcctgtttggcctgagaaaacgactgcaacaggcaagtagcaac
gagacgcagaaacgcaagcggaagacctcatcttcgagctcggatattagtgggaaggag
aggaaaagaaccagcaaaaggatcagtgtcgcgagcaaaaaaaggcagcgttgctcggac
tcttccaattacgactctgagctggagaaagagatcaagaacttgagcaaagtcagtgca
gcgaagaaatcctcctcaaagaaaggcaaaaaacgggtggcggaagaggatgcagatagt
tcatccaaggatgaagagaaagtgaaaaagaaaaagtctcacaaagaaaagatggccata
tcgaagcgcaagaaaatagctgcgaaaaaggaacagagctcttcatcgccgccatcttcg
tcaggcggagacgaggaagctgatgaggacaatcaagatttggctggagatgaaagcaat
gatgaacaaaagatccagcccatcacagagaacgtcatgattgcctcaggatcaaagttt
tgccagtcttcaggggatgaagtggagggccaatctcaaaatgtcactcattgtgccagt
gatgaatatgatgatgatcctgagaatagaattgccaaaaagatgttgttagcagaaata
agtgcaaatctatcatccggtcaagatggttcctccgacgaggaatctgaagaagaaaag
aagaagtcggacagaaaaaaagaggacaatgaaaatgatgaagaagacgaggaagctgag
gctgattctgattctgattcggactttgaaatgaccaagaaaccacgctacaggcatcga
ttactgaggcacaagctcacaatgagcgacggtgaatctggaaatgaaaagaagggaacc
aaagccaaagaaggaaacaaagaaggcacccgaaagaccaggcgaaaagatagtagcaat
gaagatactactgatcaggagagtgattctgatttcaaggaaactggatcaagtgaggag
gaggaggaggaggaggaggaaagtgagtctgatggtaaacgaaagcggccaagaaccaga
gcttcgaagaaagaggcggaggaaaatcagcgtagctatcttcagaaaaagaaaaggagg
cgaattaaagtccaggactcctcaagtgacaagagcaaatctaatgaaagtggtgatgga
ggtgatgatgaagatgacaatgatgactccaaatctcccggaaaaggtcggaagaagatt
cggaagattctgaagaatgacaagttgagaaccgaaactaagaatgccttgaaagaagag
gaagacagaaggaaacgtattgctgatagagaaaaagaaagagaaacgttgagagaggtt
gttgtggtaggagatacttccccagtgaaatgtccaatcaccactaaactggttctggaa
gaagataaggagaccaaagaatgtgtggtccaggtccatagaaatttggtgagaaaactg
aagccccatcaagttgatggtgtccaattcatgtgggattgctgctgtgaatcggtggaa
aaatcgttaaaagaagaaggatctgggtgcattttggcacattgcatgggtcttggcaaa
acactgcaggtggtgaccttcttgcacaccatgttgttatctgagaagctagacttcacc
aatgctttaatagtttgtccactgaacacagttctgaattgggtgaatgaattttcaaaa
tggcaggaaggattggacgacgatgaatctctggaggtgaatgaattggcaacagttaag
cgtccacaggagcgctcctacatgcttgagagatgggcagaagatgggggcatcatgatt
ctcggttacgaaatgtaccgtaatcttgtgctgggcaggaatgtgaaaagcaagaaaata
aaagaaatattccagcggactttagcaaatcctggtccagactttgttatatgtgatgaa
ggacatatacttaaaaatgaagcctcggccatatccaaggcaatgaattcaattaataca
aggcggaggattatcctaacaggaacacctttacagaacaacttggtagaatatcactgc
atggtgaatttcattaaggagaaccttcttggttcaatcaaagaattcaggaaccggttt
atgaatcccattcagaatggtcagtgcgcagactccactttggtagatgtgagagtgatg
aagaaacgtgcccatatcctgtatgaaatgttagctggctgtgtgcagcgaagagattac
actgcgctcacaaaattcttgccaccaaagcatgagtatgttctttctgtgagaatgatg
ccaatccagtgtaagctttaccagttctaccttgaccattttacgggtgttggggccaat
agtgaaggaagaggaaaaacgggaacaagactcttccaggacttccagatgctcagtagg
atatggacccatccttggtgtctgcaattggactacatcagtaaagaaaacaagggttac
tttgatgaggacagcatggatgaattcatagcatctgattcggacgaatcttcaatgagt
cttacttctgaggaagataaaaggaaaaagaaaaaaggcaagcgggggaagaaagacgat
agcagctcgagggagagcggcagcgacaataatgtggaagtgatcaaagtgtggaattca
cgttcccgtggtggtgggggggaagcaagcagagaggcaccgccggttgtggaaacacct
ccgattaaaccagaagaagtgaagccccccaatacgtctaatccaggcagtcctgctgca
gactggtacaagggattcatcactgatgctgatgcggaaatattgggacattctggaaaa
atgcaacttttatttgaaattctacgcatggctgaggaaattggcgaaaaagtgcttgtt
ttcagccagtctctgatatcattggatttgatagaagactttctggaactttcaaaccgg
gcgaggacagagaaatccggtgatgataaagatagctggaagtggtacagaaacattgat
tactatcgtatggatggttccacaagtgcacagactagaaaaaagtgggctgaagaattc
aatgatgaaagcaatccgaggggtcgtttgttcatcatttccaccaaagcaggatctctg
gggataaacctggtcgctgccaaccgtgtcataatttttgatgcctcctggaatccttcc
tatgatattcagagtatctttcgtgtttaccgttttggacagataaagccagtctttgtt
tacagattcttggctcagggaaccatggaggaaaagatatatgatcggcaagtaaccaag
cagtccctctcgttccgagttgttgaccaacagcagattgagcgtcactttaccatgaat
gagctaactgagctctacacatttgagccagaccagctcgatgacccaaattctgagaaa
aagaaaaaangggatacccccgtgctaccaaaggaccacattttagcggagttacttcaa
cagcagaaagattaccttgtgggataccatgagcatgattcactcttggaccacaaggag
gaagaagagctgagcgaagaggaccggaaagcagcatggtccgaatacgaagcggaaaag
aagggactttcaatgcgaaccaatgttgcgcccgggatcaattttgctgctgccaatttt
gggatgctcccagcgcattttcctttcaatatcgcaacattgtccacactgagcaaccaa
cagttggaggatcttattaaccaaggtagagagaaggtggtggaggcaagcacaagtata
gcaactgtgagatccgagcctcttgaggaccttatcgcacaattgtggaaagagaatccc
aactttaatgaagctcaggttcaagcagtggcgctcagcaagcaggcaagccaggagctg
gaaataaaacgcagagaagccatgtataatgatatcctttcaaagcagcagctgttgatc
cgatctgtgcagcagattctcatgagccgaaggcaacagttcaaccaattggcagctcag
caacagcagcaatattcgctgcagcgatccacacttctgaaccaatacatgtctcaaagg
aatgctagcccaatgctcagttatccgcacatgggcatgagagggtttccacacgggtat
ccacaagcagcagccggtatgcaacccccacctttgcagcgggcaccgccaacgtccatg
cagatgaaggggaagtctccaggcccaccacagctcaagcaaggaatgaaaaattccaaa
aattag
DBGET
integrated database retrieval system
