Callorhinchus milii (elephant shark): 103178931
Help
Entry
103178931 CDS
T03088
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103178931 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmk03021
]
103178931 (polr1b)
Enzymes [BR:
cmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103178931 (polr1b)
Transcription machinery [BR:
cmk03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103178931 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
103178931
NCBI-ProteinID:
XP_042189305
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MEDGKWRSVSEEQRWPSLRGLTQAGGGRPGPRQHQALQELVRAHVDSFDQATGDGLVRAA
QAIPPLEFNFKNERISLAFVDAVISPPMVPKGCICSDLKIYPAECRGRRSTYKGKLTADV
SWSVNGLPKGIIKQSLGMIPIMVKSKLCNLHGLSPRGLIKHHEEAEEMGGYFIINGIEKI
IRMLIMPRRNFPIAMVRPKWKNRGPGYTQYGVSMRCVRDEHTAINMNLHYLDNGSVMVNF
IYQKELFFLPLCFALKGLVDFTDYQIYQELIKGREDNSFFKSAVTQMLRLVVMEGCNTKK
QALNYLGERFSVKLRLPDWYTNEQAAEFLFDQCLCIHLKANVEKFYLLCLMTRKLFTFAK
DECQEENPDSLINHEVLTPGQLILMFLKEKMTWWLQSIKFAMDKKNQKGAFPMNSENLMK
ALSMVGDLTRPFEYLLATGNLHSKTGLGMLQDSGLCVVADKLNFVRYLSHFRCVHRGAAF
AKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHLTAICEIVTQSWSTVSLPALLCALG
VTPVDGTPNSPYSECYSVLLDGSVVGWVEREMGPHVADTLRTFKVLKEKKVPLWIEIVLI
PMTGKPSIYPGLYLFTTPCRMIRPVRNLALGKEELIGTLEQLYMNIAITEQDIVPGGTTH
QELFPHSMLSVVANLIPYSDHNQSPRNMYQCQMGKQTMGFPLHSYLYRSDNKLYRLLTPQ
SPLVRPYMYDYFNMDNYPIGTNAVVAVISYTGYDMEDAMIVNKASWERGFAYGSVYKTEL
INLDQKVTAGDSNLVFGVKPGDTRVGQKLDEDGLPAIGAVLEYGDPFYSYLNLNTGDSFV
MYYKSKESCVVDNIKVCSNDNGTATFKRVCITLRIPRNPTIGDKFASRHGQKGILSRLWP
AEDMPFTESGMMPDILFNPHGFPSRMTIGMLIESMAGKSAAMHGLCHDATPFTFSEENSA
LEYFGKMLQASGYNFYGTERMYSGISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGAR
DRLTNQPVGGRNVQGGIRFGEMERDALLAHGTSFLLQDRLFNCSDRSVAHVCIKCGSLLS
PILEKPPPSWSATRHRKHHCTLCKQSDTVEIISVPYVFRYFVAELAAMNIKIRLDVS
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggaggacggcaagtggcgcagtgtgagtgaggagcagcggtggccgagcctgcggggc
ctgacccaggccggggggggccgcccggggccgcggcagcaccaggcgctgcaggagctg
gtcagggcccacgtggactccttcgaccaggcgaccggcgacgggctggtgcgggcggcg
caggcgattcccccactggagttcaacttcaaaaatgaacgtatctctctggcgtttgtg
gatgctgtcatctcccctcctatggtgcctaaaggctgcatctgcagtgacctgaaaatc
tacccagcagagtgcagaggacggcggagtacttacaaggggaagctaactgcagacgtt
agttggtcagtgaatggcttacccaaagggattattaaacagagccttggtatgatccct
atcatggttaaatccaaactatgtaacctgcacggcttgtctcctcgaggtctcattaaa
caccacgaagaagcagaggaaatggggggatacttcataataaatggcatagaaaagatc
atcagaatgctcatcatgccaagacgcaatttcccaattgctatggtgaggcccaagtgg
aagaatagaggccctggctacacccagtacggtgtcagcatgcgctgtgtgagagatgaa
cacactgccattaacatgaaccttcactatctggacaatggcagtgtaatggtcaacttc
atctaccagaaagaactcttcttcctccctctatgctttgcactcaaggggttggttgat
ttcacggattaccagatttaccaggagttaattaaaggaagagaggacaactccttcttc
aagagcgctgtgacgcagatgttgagactggtagtgatggagggttgcaacaccaagaag
caagcattaaattacctgggagagaggttcagtgtgaagctccgcctgccagactggtac
acaaatgagcaagctgcagagttcctgtttgaccagtgcttgtgcatacacctgaaggcc
aacgtggagaaattttatttgctttgtctgatgacgcggaagctgtttacgttcgccaag
gatgaatgtcaggaagaaaatcccgacagcttgataaatcatgaagtgctgacgcctggg
cagctcattttaatgtttttaaaggagaaaatgacttggtggttacaatctataaaattt
gcaatggacaagaagaatcaaaaaggagcctttcctatgaattcagaaaacttgatgaaa
gccttaagtatggtgggagatctaacccggccatttgagtatcttttggctactggaaac
ttgcactcaaaaacaggtctgggtatgttgcaggattctggtttgtgtgttgtggcagac
aagctgaatttcgtccgttacctctctcatttccgatgcgtgcatagaggggctgctttt
gctaagatgagaaccacctctgtgcgtaagttactccccgagtcctggggcttcctgtgc
cctgtgcacactccagatggagagccttgtgggctgatgaaccatttgactgccatttgc
gagattgtgacccagtcatggagcaccgtctctctgccagctctgctttgtgccctgggt
gttacaccagtggatggcacgcccaacagtccgtattctgagtgctactcagttcttctg
gacggctccgttgttgggtgggtggagagagagatgggaccacacgtcgcggatactctg
cgcaccttcaaggttttaaaagagaagaaagtccctctatggattgaaattgttctgatt
ccaatgacgggtaaacccagtatttacccaggattgtatctcttcaccactccttgtcgg
atgatacgacctgtcagaaacttggccttgggaaaggaagagctcattggcacccttgaa
cagctgtacatgaatattgccatcacagaacaggatattgtgcctggaggaaccactcat
caggagctatttcctcacagtatgctgagcgtagtggcgaacttaattccttactctgat
cataaccagagtcctaggaacatgtaccagtgtcagatgggaaagcaaacaatgggattc
ccattgcacagctacctgtatagatccgacaacaaactctaccgtcttctcactccccag
agccctcttgtccgaccttacatgtatgactactttaacatggataactatcccataggc
actaatgctgttgtagctgtcatctcgtacacaggatatgacatggaagatgctatgatc
gtcaacaaagcatcttgggagagaggatttgcctatggaagcgtttataagactgaattg
atcaatctcgatcaaaaagtgacagctggagactctaatttggtcttcggtgtcaaaccc
ggcgacacacgagtgggacagaaactcgacgaggacggattgccagcgataggagccgtg
ctggagtacggtgatcccttctatagttacttgaatctcaacacaggggatagctttgtg
atgtactacaagagcaaagaaagttgtgttgtggataacatcaaagtttgcagcaatgat
aatgggacagcaacttttaaacgtgtgtgcatcaccttgagaatcccccgtaaccccacc
attggagacaagtttgctagtcgccacgggcaaaagggcatcttgagccgactgtggcca
gcagaggacatgccgttcacagagagtggtatgatgccagatatcctgtttaatccccac
ggattcccttcccgtatgaccataggaatgctgatagaaagcatggcaggtaaatctgct
gccatgcatggcctgtgtcacgatgccacaccattcacgttctctgaggaaaattcagcc
ttggagtactttgggaagatgctgcaggcttccggctataacttctatgggactgaaaga
atgtacagtgggatcagtggtgtggagctggaggcagacatcttcattggagtggtttac
taccagcgcctacgtcacatggtctctgacaagttccaggttagaactactggagcgaga
gataggctgacaaaccagcccgttggagggagaaacgtccaaggtggcatccgatttgga
gagatggagcgcgatgctctactagctcatggaacgtccttcttacttcaagaccgcctc
ttcaattgctcggatcgctccgtagcacacgtctgtattaagtgtggcagcctcctgtcg
ccaatactggaaaagcccccaccatcgtggtctgccacacgtcacaggaaacatcactgc
actctctgtaaacagtctgacactgttgagattatttctgtgccttatgttttccgatat
tttgtggcggaacttgcagcgatgaacattaaaattcgactggatgtgagctaa
DBGET
integrated database retrieval system
