Callorhinchus milii (elephant shark): 103179307
Help
Entry
103179307 CDS
T03088
Symbol
dhx57
Name
(RefSeq) LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cmk03012
]
103179307 (dhx57)
Enzymes [BR:
cmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103179307 (dhx57)
Translation factors [BR:
cmk03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
103179307 (dhx57)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
RWD
HA2_C
DEAD
HA2_N
zf-CCCH_4
zf_CCCH_4
zf-CCCH_2
AAA_22
zf-CCCH
nSTAND3
Torus
AAA_19
Viral_helicase1
Rad17
zf-rbx1
PhoH
Motif
Other DBs
NCBI-GeneID:
103179307
NCBI-ProteinID:
XP_042188636
LinkDB
All DBs
Position
Unknown
AA seq
1439 aa
AA seq
DB search
MNSGRRRGRPNQGGGKFKKHGGASHSGKASSKLWDEDDFCFDTTPLVLKRSRGAGRGGSR
GGSRGGSRGGSRGGSRGGSRGGSGGSRGGTRGRGATTSRADPPSRQFLPKEFKEPGEFNL
FANATMPQRSSLDGQSGSKFKSRSESRVPLQTLHMTTENQKKVRALLRELQNQETDSTTE
DEASEDECEIPEENDELDYRDEDQYWSTKDEGVAEAEKICPVYPPVEHFVQPSISVLAVR
KLTRYGFHADHCMPALETFDGDIGSSLEQLLGQCFVEKFGEGIKASRTATRASVAECAEQ
RLEEALVLSSIYADRFCERIPNRVWSVELALQFLTKKLCKSARCETEDLPEKNLKGICQY
YLLGNCRYGSKCRFRHERPGARERKADDHLRQDSNALLYTLEIRFPNDNKYPYQAPIVAF
SSINDNLPQACCLHITEHLYGEALAAAETNEPVVHTLITCLEDEEKMSELLLKDSHKYSL
PPILSLVPSKRTNNADTQETSYSSLLDRRSDRPSEVVTVKAETAVGNGELQVEEEEEEPE
VVVVETESYAHLKKTQSRRYVPRLENMQAENQKLRKQFQAKQSSRRYQSMLQERKKLPAF
QKQAEILDLLNKHQVLVVSGMTGCGKTTQIPQFLLDDSLNNPPGMLANIICTQPRRISAI
SVAERVAKERTERLGGIVGYQIRLECVKSSSTRLLYCTAGVLLRRLSGDPNLHGVSHIIV
DEVHERTEESDFLLLVLRDLMLSRSDLRIVLMSATLNAQLFSDYFNLCPVIQIQGYTFPV
DQYFLEDAVTMTKYVIEDGSPYARTTKPNDPWKAKGKTNRNTVDQVEEELMSLNVHDQTV
VRDSVPDQQLTVKQLVARYKGISKSVIKTMATMDXEKINLDLIEVLLEWIVDGDHDYPPG
AVLIFMPGLAEIKMLYEQLQSNPLFNNRRSKRCTINPLHSSLSNEEQQAVFNRPPEGVTK
IIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPCKGMESLEDSCVSRANAQQRKGRAGRV
ASGVCFHLFTSHCYQHHLQDQQLPEIKRVPLEQLCLKIKILDMFEGCDLESVLSQLIEPP
AEEGLKAAKSRLQDLGALTTDEKLTPLGYHLALLPVDVRIGKLMLFGAIFRCLDPVLTIA
ASLAFKSPFVSPWDKREEANNKKLEFAVAHSDHLALCKAYKCWTAALKENCHSGYSYCKE
NFLSGRVLQEIASMKRQFAELLSDIGFVKEGLKARYIDKMSSQGGDGIVEATGQEANSNA
ENMKLVSAILCAALYPNVVQVTVPQGKYQHTSSGAIKMPPKAEELRFVTKNDGNVHIHPS
SVNYQVRHFESPYLVYHEKVKTSRVFLRDCSMVSVYPLVLFGGGQVNVQLERGQFIISLD
EGWIRFAAASHQVAELVKELRWELDQLLEDKIKNPTMDLCSCPRGSLIINMIVKLITTQ
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgaattccggcagaaggagaggaagaccaaatcaaggaggaggaaagttcaaaaagcat
ggtggagcgagccatagtgggaaagcttcgagcaaattgtgggatgaagatgatttctgt
ttcgacacgacaccacttgtccttaaacgctctcggggtgcgggtagaggaggatcgaga
ggaggatcaagaggaggatcgagaggaggatcgagaggaggttctagaggaggatctaga
ggaggatctggaggatctagaggtggaaccagaggcagaggtgcaactacaagtagagct
gatcctccaagtaggcaattcctaccaaaagaattcaaggagccaggagaattcaatctg
ttcgctaatgcaactatgccacaaagatcaagtttggatggtcaaagcggaagcaagttc
aaatccagatctgaaagccgagtgcctttgcagactctacacatgaccactgagaaccag
aagaaggtccgggcactcctccgagagcttcaaaaccaggagacagacagcacgactgaa
gatgaagcttctgaagacgaatgcgaaataccggaagaaaatgatgaactggattacaga
gatgaagatcagtactggtctaccaaagatgaaggtgttgcagaggctgaaaagatttgt
cctgtgtacccacctgtggagcattttgtacaacccagcatatccgtacttgctgttcgg
aagctgaccaggtatggttttcatgcagaccattgcatgccagcacttgaaacatttgat
ggggacataggatcatctctggaacaattgctggggcagtgctttgtggaaaagtttggt
gagggcatcaaggcctctcgaacagcaactcgtgccagcgtggcggagtgcgcggagcaa
aggctggaggaagccctcgttcttagttctatttatgcagacaggttctgcgaaaggatt
ccaaatcgcgtctggagcgtggaactggcactccaattcttgaccaagaaactttgcaag
tcagcacgatgtgaaacagaagacttgccagaaaaaaacttgaaaggcatttgccagtat
tatctcctgggcaactgccggtacgggtccaagtgcagattcagacacgagcgtcctgga
gctagagaacggaaagcagatgatcacttgcgccaggacagcaatgcgttgctatatact
ttggaaatccgtttcccaaatgataataagtatccctaccaagccccaattgtagctttt
tcttccatcaatgacaatctgcctcaagcttgctgtttgcatataactgaacacctctat
ggggaggccttggctgcagcagagacaaatgaaccagtggtccacactttgatcacgtgt
ttggaagatgaagagaaaatgagtgaattgcttctcaaagactcccataaatacagcttg
cctccaatcctgagtctggtcccttctaaaagaactaataatgccgacactcaggaaact
tcctacagcagtttgttggatcggaggtcagatcggccgtcagaagtggttacagtgaaa
gctgagactgcagtgggcaatggtgaattacaggtggaggaggaggaagaggagcccgag
gtagtggttgtggaaactgaaagctacgcacatctgaagaaaactcaatccaggagatat
gtacccagactggaaaatatgcaagcggaaaaccaaaaacttcgtaagcagtttcaagcc
aaacagtcttctaggcgttaccaatccatgttgcaagagaggaagaaactcccagctttt
cagaaacaagcagaaattttggatttgttgaacaaacaccaggtgttggtagtgagtgga
atgactggatgtggaaagacaacacagattcctcagtttctcctggatgattctttgaac
aaccctccgggaatgcttgcaaacattatttgcactcagcctcgcagaatctctgccatc
tctgtcgcagaacgtgtggctaaggaacgaactgagagacttggaggaattgtgggatac
cagatcagacttgaatgtgtgaagtcctcctctaccaggttgctttactgcactgcagga
gtattgctcagacgactatcaggagatccaaatttgcatggtgtgtcccacattattgtt
gacgaagttcatgaacgaaccgaagaaagtgacttcttgctgctggtgctaagggatctg
atgctctctcggtctgatctacgcattgttttaatgagtgcaacactgaatgcacagttg
ttttcggactacttcaacttgtgtcctgtcattcagatccaaggatatacatttccagtg
gatcaatatttccttgaagatgcagttacaatgactaaatacgttatagaagatggaagt
ccctatgcacgcaccacaaagcctaatgacccttggaaagccaaaggtaaaaccaatcga
aatacagtggatcaggttgaggaagagctaatgtctctgaatgtgcacgatcaaacagtc
gtccgagacagcgttcctgaccagcaactcacggttaaacagttggtggcccgatataaa
ggcatcagtaagtctgtaataaagacaatggctactatggacnctgaaaagattaacttg
gacttaatagaagttttactggaatggatagtggatggcgatcacgactatcctccaggt
gcagttttgatttttatgcctggtctggcagaaatcaagatgttgtatgaacagctacag
tctaatcctttattcaacaaccggcgcagtaagagatgtactattaatccgctccattcc
tcgctgtccaatgaggagcaacaagctgtttttaatcgccccccagaaggggttaccaag
atcataatctccactaacattgctgaaacatcagttacaattgacgatgttgtctatgtt
atcgattctggcaagatgaaagagaaaaggtacgacccatgcaaaggaatggagagtctg
gaggactcctgtgtttcgcgagcgaatgctcagcagaggaagggtcgagctggccgtgta
gcgtcaggggtctgctttcacctgttcaccagtcactgctaccagcaccatctccaggat
cagcagttgccagagatcaagagggtgccgctggaacagctctgtctgaagatcaaaatt
ttggacatgtttgaaggctgtgatttagaatctgttctgtcacagttgattgagccacca
gcggaagaaggtttaaaagcggccaaaagccggttgcaggacctgggagctcttacaaca
gatgagaagctcactcccttgggttatcatttagccttattgcctgtggatgtccggatt
ggaaaactaatgctttttggtgctatcttccgttgccttgatccagttctaaccattgca
gctagtttggcctttaaatctccttttgtttctccctgggataaaagagaagaagccaac
aataaaaagctagagtttgctgtggcacacagcgaccatcttgccctttgtaaggcttat
aagtgctggacagctgcactaaaagagaattgtcattcagggtacagctactgtaaggaa
aacttcctatctggaagagtcctacaagagattgccagcatgaagagacagtttgcagag
ctattgtctgacattggatttgtaaaagaaggactgaaagccagatatattgataagatg
tcctcacagggaggagatggaatcgtggaagccactggacaagaggccaattccaatgca
gaaaatatgaaactggtctcagcgattctgtgtgctgcgctctaccctaatgtagtccaa
gtgactgttccacagggcaagtatcagcacaccagtagtggggcaataaaaatgccacca
aaagcagaagaattgcgctttgtcacaaagaatgatggaaatgtccatatccacccctct
tctgtgaactatcaggtgcgacacttcgaaagcccatacttggtgtaccacgaaaaggtg
aaaaccagcagagtgtttctgcgagactgcagcatggtatccgtgtacccgttagtctta
tttggaggtggccaggtcaatgtacaactggagcgggggcagttcataatttctctggat
gaagggtggattcggtttgctgctgcttcccaccaggtcgctgagctggtgaaagagctg
cgctgggaactggaccagcttttggaggataaaatcaagaaccccactatggacctgtgc
agttgtccacgaggatcactcattatcaacatgattgtgaaacttataacaactcagtga
DBGET
integrated database retrieval system
