Callorhinchus milii (elephant shark): 103179395
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Entry
103179395 CDS
T03088
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103179395 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103179395 (nup50)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103179395 (nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
103179395
NCBI-ProteinID:
XP_007892853
UniProt:
V9KSX3
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MAKRTADKELTDRNWDQEEESEEASDVCSTKALFTAAGTFSVASEDVLKNRAIKKAKRRN
ILSESEGSGVFKGFPGLAPSTGIPGFGAFGSGSSFKPLQGLSNGSGASSSASFATFTYAS
DITNRVDSLKSNGPPQNQLAKDEMGTKTNGINLISSQSKMGSTEYNKQLAALNCSVRDWI
TKHVNENPLCDLTPIFKDYEKHLTSIEQKYGSSSDSGSESGTSNKRPEMQSVSTFGASKI
PRGASPSLSLFSADKSKDTAPFTSEKKADITSGNSGNAGFLFGKKVENSPMAGFSFSSGV
SGSLFGKDGNQGKTAAPTFSFTVSAGNSEEVKDSENKDEKGDQENEEPPEPVVNEIKEED
AFFSKKCKLFYKKDGDFKDKGIGTIHLKPVADQKIQLLVRADTNLGNILLNIMLHPSLPC
TRTGKNNILIVCVPNPPIDDQNPDAAIPILIRVKTSEDADELHTIITEKKAALQV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagaactgcggataaggagctgactgaccggaactgggatcaggaggaagaa
tctgaagaggcttcagatgtgtgcagtaccaaagcactcttcacagctgcgggaaccttc
tcagttgcaagcgaggatgtgttgaaaaaccgagctatcaaaaaagctaaacgaagaaac
atcctctctgagtctgaaggtagtggagtattcaaagggttccctgggcttgccccatca
actggaattcctgggtttggagcatttggaagcggttcaagtttcaaacctctgcaggga
ttgtccaacggaagtggagcgtcatcctctgcctcatttgctacgttcacttatgctagt
gatataaccaatagagtggattcgcttaagtctaatggtcctccacaaaatcagttagca
aaggacgaaatgggtacaaaaacaaatggcattaatctgatcagctctcaaagtaaaatg
ggcagcactgagtacaacaaacagctagcagcgctgaattgctcagtccgagactggatc
acgaaacatgtcaatgaaaatccactctgtgacttgaccccaatcttcaaggactatgag
aagcatttgacaagcattgagcagaaatatggcagcagctctgacagtggctcagaaagt
ggtaccagcaacaagaggccagaaatgcaatctgtttccacgtttggtgcttccaaaata
ccacgaggtgcttccccatctttatctttattctcagctgacaagagcaaggatacagca
ccattcacctccgagaaaaaggcagacatcacttcaggaaatagtgggaatgctggcttc
ctctttgggaaaaaggtggaaaactctcccatggccggcttctctttcagcagtggtgtc
tcaggctcattatttggaaaagatggtaaccaaggcaagactgctgctcctaccttctcc
ttcacagtgtctgccggcaactcagaagaagtaaaagacagtgaaaataaagatgaaaaa
ggagatcaagagaatgaagagccgcctgaaccagttgtgaatgaaatcaaagaggaggat
gccttcttttccaaaaaatgtaaactgttctacaagaaagatggagacttcaaggataaa
ggaataggaacaatccatttgaaacctgtggcagatcaaaagattcaattgttagtgcga
gcagataccaacctaggaaatattttgctgaatattatgctccacccatcgctaccttgt
acgaggactggaaagaacaacatcctcattgtctgtgttcctaacccgcccattgatgac
cagaatcctgatgctgctatcccaattttgatccgggtgaaaacctctgaagatgcagat
gagctccacacaattataactgagaaaaaggctgcgcttcaagtgtaa
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