KEGG   Callorhinchus milii (elephant shark): 103179506
Entry
103179506         CDS       T03088                                 
Name
(RefSeq) syndecan-3
  KO
K16337  syndecan 3
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk04514  Cell adhesion molecule (CAM) interaction
cmk04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    103179506
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103179506
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cmk00535]
    103179506
Proteoglycans [BR:cmk00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   103179506
SSDB
Motif
Pfam: Syndecan SDH8
Other DBs
NCBI-GeneID: 103179506
NCBI-ProteinID: XP_007893024
LinkDB
Position
Unknown
AA seq 369 aa
MSGLSLSLPLLLLLLTSSLLIILCDTVSGYRVSRQTRDITTFEDQEGSGLDDDDETVYSG
SGSGYPDSETELRSTTDVGWMVTSLPSVSVYNSAQPFTFALSRAAKEREGEQSTAIPGTS
APTGFATALITTTRPATAPAASTGGPQELTTNAGTDDFFASVVPVTTGVTAITTKRSPPD
ARGTARPSATAAPQTTPATEETSTATSISSNSSKSLLVVPSTTQETESWDVIADTTVTNE
VEAPAGGAPSGDFAFSDNSEGSNEVIAVVSQPTDKVAGKNSLPGAIDNTIDTDISSSAAQ
LPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLIYRMKKKDEGSYTLEEPKQASIAYQK
PDKQEEFYA
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgtccggactgtctctgtctctccctctcctgttgttgctgctgacgagttctttgctg
atcattctctgcgacactgtgtcgggttaccgcgtgtcccgacagacgcgggacattacg
accttcgaggatcaggagggctcggggttggatgacgacgatgaaaccgtctactccggc
tcgggatcaggataccccgacagcgagactgaattgaggtcgaccacggacgttgggtgg
atggtgacctccttgccatcagtctcggtctataactcggcccagccgtttacctttgcc
cttagccgggcagcgaaggagagggagggggagcagagcacggccatcccagggacatcg
gcccccaccggcttcgccaccgcgctcatcaccaccacaagaccggctacagcaccggcc
gcctccacgggggggcctcaggaactgaccaccaacgccggcaccgacgacttttttgcc
tccgtggtgccggtaacgaccggggtgacggcgatcaccaccaaacgcagcccgccggac
gccagagggacggcgagaccctccgccacggcggctccgcagaccaccccggcgaccgag
gagacctccaccgccactagcatcagcagcaacagcagtaaaagcctcctggtcgtcccc
agcaccacccaggagacggaatcgtgggacgtgattgcggacacgacggtcactaatgag
gtggaggctccagcgggaggggctccgagcggagattttgccttcagtgacaactcggag
gggagcaacgaagtgatcgctgtcgtgtcccagcccacggacaaggtggctggcaagaac
tccctcccgggggcgatagacaataccatagacaccgacatctcgtcgtcagccgcacag
ttgcctcagaagaacatcctggagaggaaagaggttttaatagctgtgatcgtcggcggg
gtggtgggggccctgtttgcggccttcctggtcatgctgctcatctaccgaatgaagaaa
aaggacgaaggaagctacacgctcgaagagccaaagcaggcgagcatagcgtaccaaaaa
cctgacaagcaggaagagttctatgcataa

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