Callorhinchus milii (elephant shark): 103179506
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Entry
103179506 CDS
T03088
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04514
Cell adhesion molecule (CAM) interaction
cmk04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
103179506
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103179506
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cmk00535
]
103179506
Proteoglycans [BR:
cmk00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
103179506
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
SDH8
Motif
Other DBs
NCBI-GeneID:
103179506
NCBI-ProteinID:
XP_007893024
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MSGLSLSLPLLLLLLTSSLLIILCDTVSGYRVSRQTRDITTFEDQEGSGLDDDDETVYSG
SGSGYPDSETELRSTTDVGWMVTSLPSVSVYNSAQPFTFALSRAAKEREGEQSTAIPGTS
APTGFATALITTTRPATAPAASTGGPQELTTNAGTDDFFASVVPVTTGVTAITTKRSPPD
ARGTARPSATAAPQTTPATEETSTATSISSNSSKSLLVVPSTTQETESWDVIADTTVTNE
VEAPAGGAPSGDFAFSDNSEGSNEVIAVVSQPTDKVAGKNSLPGAIDNTIDTDISSSAAQ
LPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLIYRMKKKDEGSYTLEEPKQASIAYQK
PDKQEEFYA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtccggactgtctctgtctctccctctcctgttgttgctgctgacgagttctttgctg
atcattctctgcgacactgtgtcgggttaccgcgtgtcccgacagacgcgggacattacg
accttcgaggatcaggagggctcggggttggatgacgacgatgaaaccgtctactccggc
tcgggatcaggataccccgacagcgagactgaattgaggtcgaccacggacgttgggtgg
atggtgacctccttgccatcagtctcggtctataactcggcccagccgtttacctttgcc
cttagccgggcagcgaaggagagggagggggagcagagcacggccatcccagggacatcg
gcccccaccggcttcgccaccgcgctcatcaccaccacaagaccggctacagcaccggcc
gcctccacgggggggcctcaggaactgaccaccaacgccggcaccgacgacttttttgcc
tccgtggtgccggtaacgaccggggtgacggcgatcaccaccaaacgcagcccgccggac
gccagagggacggcgagaccctccgccacggcggctccgcagaccaccccggcgaccgag
gagacctccaccgccactagcatcagcagcaacagcagtaaaagcctcctggtcgtcccc
agcaccacccaggagacggaatcgtgggacgtgattgcggacacgacggtcactaatgag
gtggaggctccagcgggaggggctccgagcggagattttgccttcagtgacaactcggag
gggagcaacgaagtgatcgctgtcgtgtcccagcccacggacaaggtggctggcaagaac
tccctcccgggggcgatagacaataccatagacaccgacatctcgtcgtcagccgcacag
ttgcctcagaagaacatcctggagaggaaagaggttttaatagctgtgatcgtcggcggg
gtggtgggggccctgtttgcggccttcctggtcatgctgctcatctaccgaatgaagaaa
aaggacgaaggaagctacacgctcgaagagccaaagcaggcgagcatagcgtaccaaaaa
cctgacaagcaggaagagttctatgcataa
DBGET
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