Callorhinchus milii (elephant shark): 103179567
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Entry
103179567 CDS
T03088
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103179567 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103179567 (arid1ab)
03021 Transcription machinery [BR:
cmk03021
]
103179567 (arid1ab)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103179567 (arid1ab)
Transcription factors [BR:
cmk03000
]
Eukaryotic type
Helix-turn-helix
ARID
103179567 (arid1ab)
Transcription machinery [BR:
cmk03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103179567 (arid1ab)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103179567 (arid1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
103179567
NCBI-ProteinID:
XP_007893116
LinkDB
All DBs
Position
Unknown
AA seq
1938 aa
AA seq
DB search
MGAALQPGGLDTFQPNSHEAFSGQYNNYSAAAYPAARSGYPNPGYGLSSPRAAAAGPKAM
AAATFQRYVGQQQQQQQQTPGPGLQQQPPPPASTTPTLNQLLTSPSGARAFSGYSQAQAQ
QQQQDYSSGQELAKGAELGSQYPVQAWPGQQKSHHPPMSPGNTGQTLTRTQPTSPMDHMG
MKRPQPYGGNNNPYAQQPQQAPPQQSGPYPGQPYGPPMSQRYPVGAQGRTQGTMSGGMQY
PQQMAPYSQQGAGSYCQQGQTPYYNQQQPSYPQQQRFPLQQQDMSQEAFGTQPPQALTSN
KPSQEELTLMQQGRPSSLPGSHFRHLEQCITEIEISTLLEVRDRLKYTGDLSGSIDDLPT
GAEGPLSPGASTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVTQSRS
GPLSPAAVPGNQMPPRPPSGQSDGILHPSMNQASMGQDRGYMPRNPQLPQYGSPQTGSSL
SPRQSPGGQMHTGMSPYQQNNSINYGPQGGQYGPQGGYPRQPNYNTMSNASYGMGGTMNT
MTSVNQMHGQGPAPPYGGMPPGRMGPTTMGNRPYGGNMTPNAPTLQAQMTSGMCPPPTMN
RKAQDAAVAAMHAAANSVQSRQPSYPPMNQGGMMGAGSPYSQGMNSMAGMMNPQGPLYSM
ASNMANSSAGMTPSPEMMALGEGKLPPTQKANNKADGMLKAETKSKKSSSSTTTNEKITK
LYELGSEPERKMWIDRYFAFMEEKGMMMTNLPAVGRKPLDLYRLYMSVKDIGGLTQVNKN
KKWRELATNLSVGTSSSAASSLKKQYIQCLFAFECKIERGEDPPPDVFAASDSKKQQPKI
QPPSPAGSGSLQGPQTPQSTSSSMTEGDLKPPTPVSTPHSHMQPMQGSRSNSVSVQDPFA
ETSDPAFHKRTSVTPNPVYQPGINASDIMGRMPYEPNKDPFSGMRKAAPGTDPFMSAGPV
PNAGMGDLYNRPTTTGMSAVGMGQRQQYAYGPGFERRPEHGMGPDGSLGAASAQPSMVPV
SADPGMYSPGRYPGQQRHDPYGNQYPGQVAATGQPYSNQQPGMFPQQQQNFKRQMDGTYG
PPAKRQEGEMYGIPYTGPGQQPQQDVYNQYANAYPGTERRPVQNQFPFQYGRERMQVAQG
SATQQAMPPQMMQSPPEGPQGNVWQGRNDMPYNYPNRQVPGAPAQAPGYHTMNRSEEMMG
PDQRMNHEGQWGSHVIQRQPPFTSSASIAPNTRPPQSNYQTPPAVPNHLSQVSSPAPMQR
PPENRTSPSKSPFLHSGMKMQKVGAPMPAAHMAGAPSQSPMLRRDITFPPGSVEASQPIL
KSRRRLTTKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSSVSTFTLSQLPGFL
ELLVEYFRRCLIEIFGILKEYEIGNPGQRTLLDPEQFGKVPIDPEPVGEQSAHSEEEMAA
GAAEIPASESPEENIKHVSKFDRLPVKVVTKSDMFVVDRSHQLGRVQEFDSGLLHWQIGG
GDTTEHIQTHFESKVEVAPRKRVTTRGGSTKRHPAESRKGMTEGGNETPVKEQPEKNISA
TVDDVLSAWPSSLMEEPVNNSTETSNLENSKFPFVIHQGHSHKNITILEDEPRSRDELPL
CLVADWQDSLTKRCICISNIVRSLAFVPGNDVEMSKHPGLLLLLGKLILQHHEHPERKLA
PLTYEKEDEEDEGVSCDSDEWWWDCLEVLRENTLVTLANISGQLDLSVYPESICMPILDG
LLHWAVCPSAEAQDPFPMLGPNAVLSPQRLVLETLCKLSIQDNNVDLVLATPPFSRLEKL
YGTLIRVIGDRKSQVCREMCVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQ
LQHSQSGLMHLQTAPIEPASMDMMRRAAKALLAMAKVEENHSEFTLHESRLLDISVSPLL
NSLVTNVICDVLFMIGQS
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgctgcagcccggcggcctcgacaccttccagcccaactcgcacgaggcc
ttctcgggccagtacaacaactacagcgcggccgcctacccggccgctcgcagcggctac
cccaacccgggctacggcctgagctcgccccgggccgccgccgccggccccaaggccatg
gcggccgccactttccagcgctacgtggggcagcagcagcagcagcagcagcagactccc
gggcccgggctccagcagcaaccgccgccgcccgcctccaccaccccgaccctcaaccag
ctcctgacctcgccgagcggcgccagggccttcagcggctacagccaggcccaggcccag
cagcagcagcaggactacagcagcggccaggagttggccaagggagccgagctgggcagt
cagtacccggtccaggcctggcctgggcaacaaaagagccaccacccgcccatgagcccg
ggcaacaccgggcagaccctgaccaggacacagccgactagtcctatggaccacatgggg
atgaaaagacctcagccgtatggtggcaataataatccatatgcacagcagcctcagcag
gcaccaccgcagcagagcggaccttacccaggacaaccgtatggacctccaatgtctcag
cgctatcctgtgggtgcgcagggcaggacccaaggcaccatgagtggcgggatgcagtac
ccacaacagatggctccttacagccaacagggtgcaggcagttactgtcagcagggccag
acgccttactacaaccagcagcagccttcctaccctcaacagcagcgattcccactacag
cagcaggacatgtctcaggaagcattcggaactcagcctccacaggctttgacttccaac
aaacccagccaggaggagctgaccctgatgcagcagggacgtccatccagtttgccgggc
agccattttaggcatctggagcaatgcattacagagatcgaaataagcaccctcctggaa
gtccgagacaggctaaaatacactggggatctgtcaggttctattgatgatttacctacg
ggggcagaaggaccgctgagcccgggagccagtacttcaggaatctccagcagtcagggg
gagcaaagcaaccccgcgcaatcgcccttctctcctcatacctctccacatctgcctggg
atccgcggtccctcgccttctcctgtaggatcaccagccagtgtcacacagtcgcgctca
ggaccactgtccccagcagctgtaccaggaaaccagatgcctccccgacctccaagtggt
cagtctgatggaatccttcacccctccatgaaccaggcgtcaatgggacaggatcgaggc
tacatgccgcgaaacccccagctgcctcagtatggctctccacagaccggctcctcctta
tctccacgccagtctcctggaggccaaatgcacaccggaatgagcccttaccagcagaat
aattctataaattacgggccccagggtggccagtacggacctcaaggtggctatcccaga
caacccaattacaataccatgtccaacgcaagctatgggatgggaggcaccatgaacaca
atgaccagcgtcaaccaaatgcacggacaaggtcctgcaccaccttatggagggatgccc
cctggaaggatgggccccacgacaatgggcaaccggccttacggaggcaacatgacaccg
aatgcaccaaccctccaggcacagatgacctcaggaatgtgcccaccaccaacaatgaac
cgcaaggctcaggacgctgcagtggctgcaatgcatgcagcagcaaactctgtgcagagc
aggcagcctagttacccacccatgaatcaaggtggtatgatgggtgctggctccccctac
agccagggaatgaacagtatggctgggatgatgaacccacaaggtcctctatattctatg
gccagcaacatggcaaacagctctgcagggatgactcccagcccagagatgatggccctc
ggagaagggaaattgccaccaacacagaaagcaaacaacaaggcggatgggatgctgaag
gctgagacaaagtctaagaagagcagctcctccaccaccacaaatgaaaagatcaccaag
ctatacgagttgggttcagaaccagagcgtaagatgtggatcgaccggtactttgccttt
atggaggagaagggcatgatgatgactaatctacctgcagtcggcagaaaaccgctggac
ctttaccggctctacatgtccgtcaaagatatcgggggcctgacacaggtaaacaagaac
aagaagtggcgggagctggccaccaacctgagtgtgggcacatccagcagtgcagccagc
tcgctgaagaagcagtatatccagtgtctgtttgccttcgagtgtaagattgaacgaggt
gaggatcctccaccagacgtcttcgctgcctcagattccaaaaagcaacaaccaaagata
cagcctccttctccggctggctcagggtctcttcagggccctcagacacctcagtccacc
agcagctcgatgacagagggagatttaaagccaccaacaccagtctcaacaccccacagc
catatgcagccgatgcagggttcaaggagcaactctgtgagtgtccaggacccgtttgca
gagacgagcgacccggcattccataagaggacttcggtgacaccaaaccctgtgtaccag
cctggcatcaatgcttccgatatcatgggccgtatgccctacgagcccaataaagatcca
ttcagtggcatgcgcaaagcagctcctggaactgaccccttcatgtctgctggacctgtt
cccaatgcggggatgggagacctttacaaccgccccacgaccacgggtatgagtgctgtg
ggcatggggcagcgccagcagtatgcgtatggacctggattcgagaggaggccagaacac
ggaatgggcccagacgggagtttgggagctgcctcagcacaacccagcatggtcccagtg
agtgcagatcctggcatgtactccccaggtcgctacccggggcagcagcggcacgatcct
tatggcaatcagtatcctggtcaggtagctgcgactgggcagccctattccaaccagcag
cctgggatgttcccacagcagcaacagaacttcaaacgacagatggatgggacgtacggg
cctccagccaagcgccaggagggtgagatgtatgggattccttacacagggccggggcag
cagccacagcaagatgtatacaaccagtatgccaatgcctatcctggtacggagcgccgg
ccagtgcagaatcagttcccgtttcagtacggcagagagagaatgcaggttgcccagggt
tcagccacacaacaggccatgcctccacagatgatgcagtctcctcctgagggcccgcag
ggcaatgtctggcaaggacgtaatgacatgccgtacaactacccaaaccggcaagtacct
ggggccccagcacaggctccgggttaccacaccatgaatcgctctgaggagatgatggga
cccgatcagagaatgaaccatgaaggacagtggggttctcatgtcatccaacgccagcca
ccattcacatcatccgcatccattgctccaaatacgcggcccccgcagtccaactaccaa
acacctccagcagtgccaaaccacctgtcccaggtctccagccccgcccctatgcaacgc
ccacccgagaatcgcacgtcccccagcaagtccccgtttctccattcggggatgaagatg
cagaaagttggggcaccgatgcctgctgcgcacatggctggagctccctcacagtcaccc
atgctgagacgggatatcaccttccctcctggttcagttgaggcatctcaaccaatcctg
aaatctcgccggaggctaaccacaaaggacattggcaccccagaggcctggcgggtgatg
atgtctctcaagtcgggtctcttggctgaaagtacctgggctttggacaccatcaatatc
ttactgtacgatgacagcagtgtatccaccttcacgctctctcagttgccggggttcctg
gagctactggtagaatatttccggcggtgcttgattgaaatatttggaattctgaaagaa
tacgaaattggaaatcctggccaaaggactctgttagatccagaacagtttgggaaagta
ccgattgatcccgagcccgtgggtgagcagtccgcacacagtgaggaggagatggcagca
ggcgcagctgagatcccagcctctgagagcccagaggagaatatcaagcacgtcagcaaa
ttcgacaggctccctgtgaaagtggtaacaaagagtgacatgtttgtggtggatcgctct
catcagctgggcagggtgcaggagtttgacagcggcttgctgcactggcagattggtgga
ggagacactacagaacacatccagacacacttcgagagcaaggtggaagtagcgccacgg
aaacgggtcacaacccgcggaggatcgactaaaaggcatccggcagaaagcaggaaaggg
atgacggaaggagggaacgaaactccggtcaaggaacagcccgagaagaacataagtgca
acggttgatgacgtgctgtcggcatggccaagctcactcatggaggagccagtgaataat
tcaacagagaccagcaacttggaaaacagcaaatttccgtttgtaattcaccaggggcat
agtcataaaaacatcaccattctggaggacgagccacgtagcagagacgagctgccactg
tgcctggtggcagactggcaggactcattaacaaagcgttgcatctgtatatccaatatt
gtgcgcagcctggcctttgtgcctgggaacgacgtggagatgtcgaagcacccgggccta
ctccttctcctgggcaagctgatccttcagcaccatgaacaccccgagcgcaaactggcg
cccttaacatacgagaaggaggacgaggaagatgagggcgtaagctgcgacagtgacgag
tggtggtgggactgcttagaagtattgcgtgagaacaccctcgtcacattggccaatatt
tctgggcagctggatttgtctgtgtatccggagagtatctgcatgccaattctggatggg
ctgctacactgggctgtctgtccctcagccgaggcccaggatccattcccaatgctcggc
cccaacgcagtgctctcccctcagagactcgtgctggagacgttgtgtaagcttagtatc
caggacaacaacgtggacctagtcctggccacgcctcccttcagccgcttggagaaactt
tatgggacgttgatcagggtcatcggtgaccggaaaagccaggtgtgccgtgaaatgtgc
gtagtgctgttagcaaacctggcccagggagacagcctggctgccagagccattgcggtt
cagaagggaagcatcggcaatctgctgggctttctggaggatagtctcgctgccacccaa
ctccaacacagccagtctggcctgatgcacttgcagactgcgcccattgagccagcaagc
atggacatgatgcgccgagccgcaaaggccctcctggcaatggctaaagtagaagaaaac
cactctgagttcacgttgcatgagtcgcgactgctcgatatctctgtgtcgcctctgctg
aactctctggttacaaatgtaatttgtgatgtactcttcatgataggccagtcatga
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integrated database retrieval system
