Callorhinchus milii (elephant shark): 103179581
Help
Entry
103179581 CDS
T03088
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103179581
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
103179581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
103179581
NCBI-ProteinID:
XP_007893141
UniProt:
A0A4W3K303
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MKVDFFRKLGYAPDQIQKVDLSADTNTILGELVKAEGTVEKESVPEELWGPTLIPRGGSS
TKTPSNVPITEEIQEQENNLRTIVIDGSNVAMSHGNKEVFSCHGIQLAVNWFLERGHTDI
TVFVPSWRKEQSRPDVPIRDQHVLLELEKRKILVFTPSRRIGGKRIVCYDDRFIVKLAHE
SDGIIVSNDTYRDLQNEKAEWKKFIEERLLMYSFVSDKFMPPDDPLGRHGPSLDNFLRKK
PVVPENKRQHCPYGKKCTYGIKCKFYHPERINHPQRSVADELRANARSSPTKNLMSTGPH
KEEKRCSPHRRPYHSDVGMSGLLPSERPRVDRQYSLQNGSCLESKAALSKSMAHRSRAPG
MPGNEQFTHPAVNDSICSNSPKSYDEGFASLDKDLSGIWLSGHTEAYSNNGQYYPPLSRQ
CSYNSHESMPSLGLGGYPHQHLLSSCQGCIHMDRILQTQYSLPNDFPSLGGQSRHNCWVD
PHHSHSSEGTRSLPDPRRWTGKGQGREQQHQQEPYWKGNQWHMPEPYREERETVRMKLQA
IFHPSLVDTVMNQYPQILDPQQLAAEILAYKSRNPNA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggatttcttccgtaaattgggttacgcaccagatcagatccagaaggtggac
ctcagtgccgacaccaacaccattctaggagagttagtgaaggcggaaggcacggtggag
aaagaaagtgttcctgaggagctctggggtcccaccctaatacctcgagggggatcctca
accaaaactccatccaacgtccccatcaccgaagaaatccaagagcaggagaacaacctg
aggacgattgtcatcgatggtagcaacgtggcaatgagtcatgggaataaagaggtgttt
tcatgccatgggattcagctggctgtgaattggttcctggagcgaggtcacacagatatc
actgtgtttgtgccgtcttggaggaaagaacagtcaagacctgacgtgccaatcagagat
cagcacgttcttctggagttggaaaagagaaagattcttgtcttcaccccttcacggcgg
attggtggcaagaggattgtctgctacgacgaccgctttattgtgaaactggcgcacgaa
tctgacggcataattgtctccaacgacacgtaccgggacctgcagaatgaaaaggccgaa
tggaaaaagttcatcgaagaacgtctcctgatgtattccttcgtgagcgacaagttcatg
ccacccgatgatccccttggacgtcacggaccgagtcttgacaacttcttacggaaaaag
cctgtggttccagaaaacaaacggcagcactgcccttacggtaaaaagtgcacatacgga
attaagtgtaaattctatcatcccgagcggatcaaccacccccagcgctcggtggcggat
gagctccgtgccaatgcgaggtcctcgcccaccaagaacctgatgtccacaggacctcac
aaggaggagaaacgctgcagtccccacaggaggccgtatcactccgatgtgggcatgagc
gggctcttgccgtccgagaggccccgggtggacaggcagtactcactgcagaacgggagc
tgtctggagagcaaggctgcgctgagcaagtccatggcccaccgcagcagagcccctggg
atgcccggcaacgagcagttcactcacccagcggtcaatgattcaatatgctccaactca
cccaaaagttacgatgaagggttcgcctcgcttgataaagatttgtcaggaatttggctg
agtggccacactgaagcctactctaacaatggacagtattatccacctctatccagacag
tgcagctataattcccatgaatcaatgccatctctagggcttggtgggtaccctcaccaa
catctactgagctcatgccagggctgcattcacatggacagaatactccagacccaatac
agccttcccaatgacttcccttcgcttggtggccagagcaggcataactgctgggttgat
ccccaccattcacacagcagcgaagggaccaggagtctcccagaccctcggagatggaca
gggaagggacagggacgtgagcagcagcaccagcaggaaccctactggaaaggtaaccag
tggcacatgcctgagccctacagggaagagcgagagactgtccgcatgaagctccaggct
atcttccaccccagtctggtggatacagttatgaaccaatacccacaaatccttgatccc
cagcagctcgcagcggagattctggcttacaaatcccgaaaccccaacgcttaa
DBGET
integrated database retrieval system