Callorhinchus milii (elephant shark): 103179743 Help Entry 103179743         CDS       T03088                                  Name (RefSeq) LOW QUALITY PROTEIN: mucin-5AC   KO K03129   transcription initiation factor TFIID subunit 4 Organism cmk  Callorhinchus milii (elephant shark) Pathway cmk03022   Basal transcription factors Brite KEGG Orthology (KO) [BR:cmk00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     103179743  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cmk03021]     103179743    03036 Chromosome and associated proteins [BR:cmk03036]     103179743 Transcription machinery [BR:cmk03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIID      103179743    Coactivators     SAGA/TFTC/STAGA complex      103179743 Chromosome and associated proteins [BR:cmk03036]  Eukaryotic type   Histone modification proteins    HAT complexes     TFTC complex      103179743 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TAF4 TAFH Motif Other DBs NCBI-GeneID:  103179743 NCBI-ProteinID:  XP_042187629 LinkDB All DBs Position Unknown AA seq 1585 aa AA seqDB search MGTWEECELRLRGRGRERECGPRAGVRPASRSAAREPECGPRAGVRPASRRLQREPGLPR PAPRRCLLSAPGTRWAARHCAARHCAAGAPDWQHPALDWQHPAPDWQHPAPDWQHQHPCT PRLATPSTGPRPTGNTQHPTGNTQHPLTGNTQHPTGNTQHPTGNTQHLTGNTQHPTGNTQ HPTGNTQHPTGNTQHPTGNTQHPLTGNTEQPLTGNCSSRNPDNCNPGNRDTQTGNSEYPQ TGDCNPGNRHPQTGNSKQPQTGNCPSRNPETDKGPPQTGTSHPGKSHPQICKNYLQTSSN AGNRDSQPGNGHLQTGISNLEGRNPETGKGGPQTVNCNPGNGDQQPGNRDAQTDDSNPGS KDPDTGNGNPGSRVLQTGNTEPRAGNTDSWARNTDPPTGNTDPRAGNTDDRAGNTDDRAG NTDDRAGNTGDRAGNTDPQAGNTDPQAGNTDPRAGNTDLRAGNTDHPTGNNAPWVGNTDP PTGCTDPQTDNNDPQTGRADPQTGNSNPGIRAPWNGNNNAGNGAPRTGNNNLGNRDPQSG NRDLESGISNPGNRDLESGISNPGNRDLESGSSNPGNRDPQPGNRDLESGISNQGNRDVK SGISNPGNRDIKSGISNPGNRNLESGIGNPGNRDPQPGNRNLQSAISNAGNRDFQSGSSK PGNRDLQSGNRNLESGSSNPGTRDLESGISNPGNRVPQTCNRDAQTGNSNPGHGAVQPGS GSHGCEAGVAGVVSTGRHSLQPAAALLASPGLSGRAGAGQPPPPPPPPGMVQSVPGTLRG AQAAQGLGGTAVLPTTCPLPNSGNSNSNGNSNKSPGSNTNTAATAGQRTLTAISSPLVNQ TPTPTVITTSSSSSSISLVHNLQIPPGMVLARSDSGQLVLVPQKAIAQAQARARAQAQAS GTAFPTATSSMTSVRISTVQATGAQIIAKQVNPPMGQQVKSVTVQQVADATCSHQTAGAA HRITLVQAPSTGGGTPVAVVRAGIPARAVSTLPQKPTVTPPERPSTATATQSNTSLETLE NVKKCKNFLATLIKLASGGNNSPEMASNVKGLVQKLLDGKMEAEEFTSQLYKELKSLPQP YLVPFLKRSLPALRIQTPSSQLFVQQCLQQPAAPDLVRKPGALSAAKPLGVVRTTLPITV TSPSQQPNHSPFQKMQQPKLTQTISPTPVVREMYNSVTKLLCLTQGDPTFRLLKAGCPYL RNGRANKYFGVSLPGKRNLTFYGLWRERVGGGTKSAKKLDRPDSPAVWSCGREATSECTA KDSPGDFTETSNPHHCARVLPNPTQQVQGVSTPSVLNVPAFSGARHSLQASPAQRNKMKE VGGSVAFRDEDDINDVASMAGVNICEENARILATNSETVGTMIHSCKDEAFLSVATLQKR VLEIGQTHGVMEVSSEVLNTISHATQERLSNLVKKLNTIAQHRMVSYKDDVQYSVSSDAR TQLKFFEQLERLEKQRKDEVERETLLRLAKSRVRQEDPEQMRLKQKAKEMQQMELAQMQQ REANLTALAAIGPRKRKLPNSPALAAGNEGASGGAIALGGLGSSVMGRLHARPRLTRVNL RDLLFCLDQEREMKHSLLLYRSYLK NT seq 4758 nt NT seq  +upstreamnt  +downstreamnt atgggcacttgggaagaatgtgagctgcggctgagagggagggggagggagcgcgagtgc ggcccgcgagccggagtgcggcccgcgagccggagcgcggcccgcgagccggagtgcggc ccgcgagccggagtgcggcccgcgagccggcggttgcagagggagcccggcctcccgcgc cccgcgccccgccgctgcctcctctcggcgcccggcacccgctgggcggcgcggcactgc gctgcgcggcactgcgcggcaggagcacccgactggcaacacccagcacttgactggcaa cacccagcacccgactggcaacacccagcacccgactggcaacaccagcacccctgcacc ccccgactggcaacacccagcaccgggccccgcccgactggcaacacccagcacccgact ggcaacacccagcaccccctgactggcaacacccagcacccgactggcaacacccagcac ccgactggcaacacccagcacttgactggcaacacccagcacccgactggcaacacccag cacccgactggcaacacccagcacccgactggcaacacccagcacccgactggcaacacc cagcaccccctgactggcaacaccgagcagccgctgactggcaactgttccagtaggaac cctgacaactgcaatccgggcaacagagacacgcagactggcaacagtgagtacccccag actggcgattgcaatccgggcaacagacacccccagacaggcaacagcaaacaaccacag actggcaactgtcccagtaggaaccctgagactgacaaaggcccaccccagactggcacc agccacccgggcaaaagccacccccagatttgcaagaattacctccagactagcagcaat gcaggcaacagagactcccagcctggcaacggacacctccagactggcatcagcaatctg gaaggcaggaaccctgagactggcaaaggggggccccaaactgtcaactgcaatccgggc aacggagatcagcaacctggcaacagagacgcccagactgacgatagcaatcctggcagc aaagaccctgacactggcaacggcaatccaggcagcagggttctccagactggcaatact gaaccccgggctggcaacacagattcctgggctcgcaatacagaccccccgactggcaac acagaccctcgggctggcaacacagacgacagggctggcaacacagacgacagggctggc aacacagacgacagggctggcaacacaggcgacagagctggcaacacagacccccaggct ggcaacacagacccccaggctggcaacacagacccccgggctggcaacacagacctccgg gctggcaacacagaccatccgactggcaacaatgccccctgggttggcaacacagacccc ccgactggctgcacagacccccagactgacaacaatgacccccagactggccgcgcagac ccccagactggcaatagcaatccgggcatcagagccccttggaatggcaacaacaatgcg ggcaatggagccccccggactggcaacaacaatctgggtaacagagacccgcagtctggc aacagagacctcgagagtggcattagcaacccgggcaacagagacctcgagagtggcatt agcaacccgggcaacagagacctcgagagtggcagtagcaacccgggcaatagagacccg cagcctggcaacagagacctcgagagtggcattagcaaccagggcaacagagacgtcaag agtggcattagcaacccgggcaacagagacatcaagagtggcattagcaacccgggcaat agaaacctcgagagtggcattggcaacccgggcaatagagacccgcagcctggcaacaga aacctccagagtgccattagcaacgcgggcaacagagacttccagagtggcagtagcaag ccgggcaatcgagacctgcagtctggcaacagaaacctcgagagtggcagtagcaaccca ggcactcgagacctcgagagtggcattagcaacccgggcaatagagtcccgcagacatgc aacagagacgcccagactggcaatagcaatccgggccacggagccgtgcagcctggcagc gggagccatgggtgtgaggcgggggttgccggtgtggtcagcactggccggcacagcctg cagcccgcggcagctctcctcgcctccccagggctaagcggcagggctggggcgggccag cctccccctccgcctccgccgcctggcatggtgcaatctgtgccgggcaccctgcggggg gcgcaggcggctcagggtttggggggcacggcagtgctgcccaccacctgcccgctcccc aacagcggcaatagcaacagcaacggtaacagtaacaagtctcccggctccaacaccaac accgcagccactgctgggcagaggacactcactgccatctcctcaccactggtcaaccag accccaacccccaccgtcatcactacatcatcatcatcgtcgtcaatatcgctagtacac aacctccagatccctccaggtatggtgcttgcccgaagtgacagtgggcaactagtgctg gtcccacagaaagccattgcccaagctcaggctagggctcgggctcaggctcaggcatcc gggactgcctttcccacagcgacctctagcatgacatcagtccgaatctctactgtgcag gccaccggagctcagatcatcgcaaagcaggtgaatccgcccatgggtcagcaggtgaag tcagtcactgttcagcaggtggcagatgcaacctgcagtcatcagacggcaggtgctgcc catcgcattacactggtccaggctcccagtacaggaggaggaacgcctgtagcagtggtg agagcgggtatcccggcgagggctgtatcgacgctgccccagaaaccaaccgtgacacca ccagagaggcccagcaccgccaccgccactcagagcaacacgtctctggaaacgttggaa aatgtgaagaaatgcaaaaacttcctggctacgttaattaaactagcctcaggcggaaat aactccccggaaatggccagtaacgtcaagggcttagtgcagaaactgctggatgggaag atggaagccgaggaattcacgagccagttatacaaagagctcaaatctttgccacagcct taccttgtgccttttctgaagcgaagtctccccgccttaaggattcagacaccgagctct cagctctttgtccagcaatgtctccagcaaccggcagctccggatctcgtcaggaaacca ggagccctgtctgcggctaaaccgctaggcgtagtgcggactacactgcccatcactgta actagcccatcgcagcagccaaatcacagtcccttccagaaaatgcagcagccaaaactc acgcagactatttcgccaactccggtggtaagagaaatgtacaacagtgtcacaaagctg ctttgcctaacgcagggtgatccaacctttcggctgctgaaggccggatgcccctatttg agaaacggccgcgccaataaatattttggggtttcccttccggggaaacggaacctaaca ttttacgggttatggagggagagggtggggggaggaacaaaatcggcaaaaaagttggac cgccctgacagtccagcagtctggagttgtggtcgtgaagccactagcgagtgcactgcc aaagactcacctggtgactttacagagacctccaacccacatcactgtgcccgtgtcctc ccaaatccaactcagcaagttcaaggagtttctacaccttcagttctaaatgtgccagcg ttctcaggagccaggcattcgctgcaagcttcccctgctcagaggaacaaaatgaaagag gtcggaggcagcgttgctttcagggatgaggacgatattaacgacgtggcctctatggct ggggtgaacatctgtgaagagaacgcacgaatcctggccaccaactcggagacggtgggc accatgatccactcctgcaaggacgaagctttcctttccgtggcaacgctgcagaaacga gtgttggaaatagggcagacgcacggagtgatggaggtgagctccgaggttctgaacacc atctcacacgcaacccaggagcgcttgtcaaacctcgtgaagaaactcaacacaattgca cagcatcggatggtgtcttataaggatgatgtccagtacagcgtttcgagcgatgccagg acgcaactgaagtttttcgagcagttggagcggttggagaaacagcgaaaggacgaagtg gaaagagaaaccctgctgcgattggcaaagagccgtgtcaggcaagaggacccggaacag atgaggttgaaacaaaaagccaaagagatgcagcaaatggaacttgcacagatgcagcaa cgagaggcgaaccttacagccctggctgccatcggacccagaaaaaggaagttacccaat tccccggcacttgcagctggcaatgagggagcaagcgggggtgcgattgcacttggcggc ttaggatcctcggtgatgggccgccttcacgcccgtccgaggttaacacgggtcaatctc agggatcttctcttctgcctggaccaggagagggaaatgaagcactcgctgctgttatac cgctcctatctcaaataa

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