Callorhinchus milii (elephant shark): 103179784
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Entry
103179784 CDS
T03088
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103179784 (tmf1)
Membrane trafficking [BR:
cmk04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
103179784 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
103179784
NCBI-ProteinID:
XP_007893394
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MSWFNASHLSSFAKQALSQAQKSIDRVLDIQEDEGDSWAHSITPGYEEALLVKSSSISGG
WVSTQWGTPIENSPNPCSEDSLKAITTPVTRTVVDESENFFSAFLLSADIQTLQNTPVVS
KPPAKSQLPKEVKGTLTAKPSESIELSVPEKPYSEDESSEALEIDDIELKESNDLIVSQL
PSVTSESSESCTSKKEVRNKEDEKLGEATENESDSLASGTLADSTGEKMTDNTEKNEHSE
SLPDSPSKPSTPPVVLEGKEPKSEDRQSNTPSPPISTFSSGTSTTSDIEVLDHESVLSES
SASSRQEAADSKASLHLMQTSFQLLSTSACNDYQRLDEYQKLTESSSSSDAFERIDAFSV
QSLDSRSVSEINSDDDMPGRGCNLASGSGGQSASNSEPTEQPVGDVEESTNEMLKEIVFD
ETETEMEESGRSATPVNSEQPEVLLVPVLTVNENQNTEAEIIDEPPSAIAEVECQTNGQF
EKLQLQKIIDELTEKLEKREIQLLAVSKDKAGLEETIDNLKDEMIGLKEETNGISPIKEE
FTNRIAESEKKAQVACKERDNVKKELKILRAELATRLNSNETAELMREKDDQINALMEEG
EKLSKQQLQNSNNIKKMRAKEKDNESLITKQSKKIKELEEEVQHLQQVLDGKEDIEKQHR
ENIKKLNAVVERQEKENSNLEINFDELKEKNRSLQSALDSSYKELAELHRANAAKDSEAQ
EAALSHEMKTKEALSLGLERAQEEARQQQEALAVQVADLRLALQRAEQQQGRKEDYLRQE
IGELQQRLQEADNRNQELSQSVTSASKPLLRQIENLQATFVAQSLSWEKLEKNLSDRLAD
SQTQLASAMEKERSVTEELLLIRTQISSLESQNSLIRQDKSRLQAHLEAERVRLEKTEDE
SNRHYVEFENLKAEYTKALEDAKREKTLLTNQLEMEKLKAEHERKKATLAQETLKEKERK
LFSNQVMEPALNTPTLSRSSSVSGAEMASLQASIHSQEDLFEHSFGSMTTSANGTNLYEA
LRMGAGSSVFENLQSQLKQREGEIAQLQLEISSLEKTRAIMAEELVKLTTQNDELQEKVN
EIPILREQLKDIDQRYNTILQMYGEKAEEAEELRLDLEDVKNMYKAQIDELLKQRPH
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcctcgcacctgtcgagcttcgccaaacaggcgctgtcacaggcc
cagaaatccatcgaccgggtcctggacatccaggaggacgagggggactcgtgggcccac
agcataacgccggggtatgaggaagcattactagtcaagagttcctccatcagcggagga
tgggtttccacccagtggggaacccctatagagaacagccccaatccctgttctgaagat
tcactaaaagccatcaccacaccagttacacgaactgtggtggatgaatcagagaacttc
ttcagtgcctttctattatctgctgacatccaaactcttcagaatactccagtggtctct
aaacctccagccaagtcacagctgcccaaagaggtaaaaggcacattgactgcaaagccc
agtgaatccattgaattaagtgtaccagaaaagccatactcagaagatgagagctcagag
gcacttgaaatagatgacattgagttaaaagagtccaatgacctcattgttagccagttg
ccaagcgtaacctcagaaagctcagaatcttgtacaagtaaaaaggaggtgaggaacaag
gaggatgaaaaactaggtgaagcaacagaaaatgagtctgacagtttggcttctggtaca
ttagctgattctacgggagaaaaaatgactgataacactgaaaaaaatgaacattcagag
agcttgcctgacagcccatcaaaacccagcacccctcctgtagttttggagggaaaagag
cccaaatcagaggacaggcaaagtaacactccctctccccccatcagtacattttcctct
ggaacctcaacaaccagtgacattgaggtgctggatcacgagagtgtgcttagtgaaagc
tcagcaagttctagacaggaggctgcggattcgaaagccagcctgcaccttatgcagaca
tcttttcagttattatcaacctctgcctgcaatgactatcagcgccttgacgagtatcag
aaacttactgaaagctccagctcttcggatgcttttgagagaatcgatgccttcagcgtg
cagtctttggacagccggagtgtgagtgaaattaattcggacgatgacatgcccggccgg
ggctgtaacctggcatcagggtctggaggacagtctgcttctaattcagaaccaactgag
cagccagtgggcgatgtggaagagagcacaaatgagatgctgaaagagatcgtatttgat
gaaacagaaacggaaatggaggagagtggacgaagcgcaactccagttaacagtgagcag
cccgaggtcttgcttgtacctgttctaacagtgaatgaaaaccaaaatacggaagctgaa
ataatcgacgagccgccatcagcaattgcggaagttgaatgccagacaaatggccaattt
gagaagcttcaattgcaaaagataattgatgaactgacagaaaagctggaaaagcgagag
attcaacttttggctgttagcaaggataaagctggattggaggagacgattgataatctg
aaagacgagatgattggattgaaggaagaaaccaacggcatctcccccataaaagaggaa
ttcaccaatcgtattgcagaatcggaaaagaaggcccaggttgcttgcaaggagagggac
aatgttaaaaaggaattaaagattttgagggcagagctggctactcggctgaactccaat
gaaacagcagagcttatgcgagagaaagatgaccagatcaatgcattaatggaagaaggc
gagaaactttcgaaacagcagctgcagaattcaaacaatataaagaaaatgagggctaag
gagaaagacaacgagagtctgatcacaaaacaaagtaaaaagatcaaggagctggaggaa
gaagttcagcatttgcaacaggtgcttgacgggaaagaggatatagagaaacagcatcgg
gagaacatcaagaagctgaatgcggtggttgaaagacaggagaaagagaatagcaactta
gaaataaactttgatgaactaaaggaaaagaatcgcagccttcagtctgcacttgacagt
tcctacaaagagctagctgagctgcacagggctaatgcagctaaagacagtgaagcccag
gaggcagctttaagtcatgagatgaaaaccaaggaagcactttctctgggattggagcga
gcccaggaggaggctaggcagcaacaagaagcacttgcagttcaggtggcagatcttaga
ttggctcttcaacgggctgaacaacagcaaggaaggaaagaggattatttacgtcaggaa
attggtgaattacagcagaggcttcaggaagcagataatcggaaccaggagctgagccaa
agcgtcacctctgcaagcaagcctctgctccggcagatagaaaatcttcaagccaccttt
gtggcacagtcattgtcctgggaaaaactagaaaagaatctgtctgacagactagcggac
agtcaaacccagctggcttctgctatggagaaagagcgatcggtcacagaagagctgctt
cttatcagaactcaaatctcctccttggagtcacagaacagcttaatacgccaggataag
agcaggttgcaggctcacttggaggcagagagagtccgtcttgaaaaaactgaagatgaa
agcaacaggcactatgtagagtttgaaaatctcaaagctgaatacactaaggcacttgaa
gacgcaaagagagaaaagacactgttgacaaatcagttggaaatggagaagttgaaagct
gaacatgaaagaaaaaaagcaactcttgcacaagagacattaaaagagaaggagcggaaa
ttgttcagcaaccaggtgatggaaccagcattaaacactccaacgctctctcgatccagc
tctgtcagtggggctgagatggcttccttgcaggcttccattcattcgcaggaggatttg
tttgagcattcgtttggatcgatgaccacttcagctaatgggaccaacctgtatgaggca
ctgagaatgggggcaggatccagtgtctttgagaatctgcagtcacaactgaagcaaagg
gaaggagaaattgcacagttgcagcttgaaatctctagcctagaaaagacccgagctatc
atggctgaggaactcgtcaagttaacaacacagaatgatgaactacaggagaaagtaaat
gaaatccctatactacgtgaacagcttaaggatatcgatcagcgatacaacacaatcctg
cagatgtatggtgagaaagctgaggaagccgaggaactccgactggacctcgaagatgtt
aaaaacatgtacaaggctcaaatcgacgaactgttaaagcaacgaccacactga
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