Callorhinchus milii (elephant shark): 103179807
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Entry
103179807 CDS
T03088
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103179807
Enzymes [BR:
cmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103179807
Ubiquitin system [BR:
cmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
103179807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Dscam_C
Motif
Other DBs
NCBI-GeneID:
103179807
NCBI-ProteinID:
XP_042195618
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MALAKMRSPTPPIAILDQYLLPEEHPSVHDYYDPNDYLEGMHPEVDREELEYEEVDLFRT
SSQDKLGLTVCYRTDDEDDLGIYVSEIDPNSIAAKDGRIREGDRIVQINGIEVQNREEAV
ALLTSEENKNVSLLLARPEIQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTAGILQQ
KKHEEDEVTTDTATILSNQHEKDSGLGRTDESTRNDESSEQENPGEEHGLGPGGSCETGV
GRRRPRPVPSCGHNHHHHHHHQYLHHHHHQQQQQQSQDPLLLDSFDAAFLGLPADDECER
FRQLLELKCRARARGGCGLWSGSDREDEGIELECLSVARAHGRARHVSEAEAQGQSQARG
PSPGPAAPAWMLHDGGGFRNYNTSAEALGLTLGLGLGLGPRRRGRRRTRPRGGGEAAVAA
VDDVDCNLQEEPVVEEEEEEGEEEVVVVVGGEEEEEEAGDEGLRPAATQLHGSPGTGLVG
LGPTPGSGNGGGRRRQQQQQRRHHHHHQQQHHHHSPSRRHAHIPAHAQHYRSYMQLVQQR
SAVEEYAQSQASLESGERDELRPGSGSGPTTTATATASASAAAAIKAAEWKVKVRSDGTR
YITKRPARDRLLRERAMRIREERRGLTTDDDAASELKTGRYWSKEERKRQLVRAREQRRR
RELMVRSGLGCVREQQQQQQPPPPPPPPSQDKREVTILELSHRKMMRKRNKKVFDNWMTI
QELLTHGTKSPDGSRVYNSLLSVTTV
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcattggctaaaatgaggtcacctactccacccattgcaatactggaccaatacctt
ttgcccgaagagcatccatcagtacatgattattatgatcccaatgactacttggaagga
atgcatcctgaagttgatagagaagaattagaatacgaggaagtggacttgttcagaaca
agcagtcaagacaagctgggcctcacagtatgttacaggacagatgatgaagatgatctg
ggaatatacgtgagtgagattgatccgaacagcattgcagcaaaagatggtcggataaga
gaaggcgatcgaatagttcagataaatgggatcgaggtccagaaccgtgaagaagccgtg
gctctccttaccagcgaggagaacaaaaatgtctcgctgcttcttgcccgaccagagatc
cagttggacgaaggctggatggatgacgaccgaaatgatttcctggatgatttacacatg
gatatgttggaagagcagcaccaccaggcgatgcaatttacagctggcatccttcagcag
aaaaagcacgaggaagacgaggtgaccacagacacggccaccatcctgagcaaccaacac
gagaaggacagcgggttgggccgcacggacgagagcaccaggaacgacgagagctcggag
caggagaacccgggcgaggagcacggcctggggcccgggggctcgtgcgagaccggggtc
gggaggaggaggccgaggcctgtgccgtcgtgtggccacaaccaccaccaccaccaccac
caccagtaccttcaccaccatcaccatcagcagcagcagcagcagagtcaggacccgctg
ctcctcgactccttcgacgccgccttcctgggccttccggccgacgatgagtgcgagcgt
ttccgccaactgctggagctcaagtgccgggccagggcgaggggcggctgcggcctgtgg
agcgggagcgaccgggaggatgagggcatcgagctggagtgcctgagcgtggcgagggcc
cacggccgggcccggcacgtgagcgaggccgaggctcaaggccaaagccaggcccgaggc
ccgagcccgggccccgccgccccggcctggatgctccacgacggcggcggcttccggaac
tacaacaccagcgccgaggcgctgggcctgacgctcggcttgggcctggggctcggaccg
cggcggagggggaggcggcggactaggcctcggggagggggggaagccgccgtcgccgct
gtcgacgacgttgactgcaacctacaagaggagccggtggtcgaggaggaggaggaggag
ggagaggaggaggtggtggtggtggtggggggtgaagaggaggaggaggaagcgggagat
gaaggcctgagaccggcagctacacagctacacggctccccgggcacaggcctagtaggc
ctaggcccgaccccgggctctggtaacggcggcggccgacgtcgccagcagcagcagcag
cgccgccaccaccaccaccaccagcagcagcaccaccaccactccccgtcccgccgccac
gctcacatcccggcccacgcccagcattaccgcagctacatgcagctggtgcagcagcgg
tcggcggtggaggagtacgcccagagccaggccagcctggagagcggggagagggacgaa
ctgaggccggggtccgggtcggggcctaccaccacggccacggccacggcctcggcctcg
gccgccgccgccatcaaggccgccgagtggaaggtgaaggtgaggagcgacgggacccgc
tacatcaccaagcggccggcccgggaccggctgctgcgggagcgggccatgcggatccgg
gaggagcgccggggcctcaccaccgacgacgacgcggccagcgagctcaagacgggccgc
tactggagcaaagaggagcgcaagcggcagctggtcagggcccgcgagcagaggcggcgc
cgggagctgatggtcaggagcggcctgggctgcgtcagggagcagcagcagcagcagcag
cccccacccccaccaccacccccctcccaggacaagagggaggtgaccatcctggagctg
agccacaggaagatgatgaggaagaggaacaagaaggtcttcgacaactggatgaccatc
caggagctgctgactcacggcaccaagtcgcccgacggctccagggtctacaactccctg
ctgtcggtcaccaccgtgtga
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integrated database retrieval system
