Callorhinchus milii (elephant shark): 103179892
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Entry
103179892 CDS
T03088
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03030
DNA replication
cmk03410
Base excision repair
cmk03420
Nucleotide excision repair
cmk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103179892 (rfc4)
03410 Base excision repair
103179892 (rfc4)
03420 Nucleotide excision repair
103179892 (rfc4)
03430 Mismatch repair
103179892 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmk03032
]
103179892 (rfc4)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103179892 (rfc4)
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103179892 (rfc4)
DNA replication proteins [BR:
cmk03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103179892 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
103179892 (rfc4)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103179892 (rfc4)
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103179892 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
103179892 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_16
Mg_chelatase
AAA_11
AAA_22
AAA_30
AAA_24
SLFN-g3_helicase
AAA_28
AAA_14
RuvB_N
DUF815
AAA_19
AAA_5
ResIII
Gp44_lid
DNAX_ATPase_lid
Kinesin
AAA_7
Motif
Other DBs
NCBI-GeneID:
103179892
NCBI-ProteinID:
XP_042195031
UniProt:
A0A4W3HPC8
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MQAFLKGAGATSIKPAKEKAAGSSGESKKQKSMPWVEKYRPKCMDDVAFQEEVVSVLKKS
LQGADLPNLLFYGPPGTGKTSTILAAARELFGPELYRQRILELNASDERGIQVVREKVKN
FAQLTVAGTRSDGKTAPPFKIIILDEADSMTNAAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLADSVQERRLLDICEKENVTYTDEAISTLVNVSEGDLRKAITYL
QCSVRLMGGNSITGKVITEIAGVISAEMIDGLIAACYSSSFEKLETVVKNMINEGHAATQ
LINQLHDIIIDKEDLNDKQKSAITEKLAEVDKCLADGADEFLQVIGLCAVIMQQFTQN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcttttctgaagggagcaggagccaccagcatcaaaccggcaaaagaaaaggca
gctgggagcagcggagaaagcaagaaacaaaagtcaatgccatgggtggagaaatatcgg
ccgaaatgtatggatgatgttgcgtttcaagaggaagttgtgtctgtgctgaaaaaatcg
ctgcaaggagctgatcttcccaacttgctgttttatggtcctcccggaacaggaaagacc
tccacaatattggctgcagcacgggagctttttgggcctgagttgtaccggcagcgaatt
ctggagctgaacgcctctgatgaacgcggcatccaggttgtaagagaaaaggtgaagaac
tttgcccagctgactgtggctgggactcgatcagatggaaaaactgctccaccatttaaa
ataatcatcctggacgaagcggactccatgacaaatgctgctcaggctgccctccggcgc
accatggagaaagagtccagaaccactcgcttctgcctcatctgcaactatatcagtagg
ataattgaaccgctgacctctcgatgttctaaattccgttttaaacctttggcggatagt
gtacaagaacgcaggttgctggacatctgtgagaaggagaatgtaacatacactgatgag
gcaatctctactcttgtgaatgtttcggaaggagacctgaggaaggcaataacgtacctg
cagtgttcagtgcgacttatgggaggaaacagcatcacagggaaagtcattactgaaatt
gctggggtgatttcagctgagatgattgatggcctcatagctgcatgctacagtagctca
tttgaaaaactggaaaccgttgtaaagaacatgatcaatgaaggtcatgcagcgacacag
ctaatcaaccagcttcacgatatcatcattgataaggaggacttgaatgacaagcagaag
tcggcaatcacagaaaagctcgcagaagttgacaagtgtttggcagatggggctgacgag
ttcctacaggtgattggtctttgtgctgttatcatgcaacagttcacacagaactga
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integrated database retrieval system