Callorhinchus milii (elephant shark): 103179930
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Entry
103179930 CDS
T03088
Symbol
drosha
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103179930 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103179930 (drosha)
03009 Ribosome biogenesis [BR:
cmk03009
]
103179930 (drosha)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103179930 (drosha)
Enzymes [BR:
cmk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
103179930 (drosha)
Messenger RNA biogenesis [BR:
cmk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
103179930 (drosha)
Ribosome biogenesis [BR:
cmk03009
]
Eukaryotic type
90S particles
RNase
103179930 (drosha)
Prokaryotic type
rRNA processing factors
103179930 (drosha)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
103179930 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
103179930
NCBI-ProteinID:
XP_007893655
LinkDB
All DBs
Position
Unknown
AA seq
1427 aa
AA seq
DB search
MSFHSGRGGSAPTGHGTFPKAGGPRGRGASGNRMPQQTFQPPSYRPSHPQQPPPLLLCDQ
QVTPPPRFTSPQNTGYAPPRADFMTYPPSVPQPGEVDIRQNPMHQCPVRARAPFPSPPVR
QGFPGLPCYPQAPPVPSPTPAVSGTPDRQDSFHHLMPSAPTQPPPLLAPPQQINYQAPYT
MSYSQHFQLQHFGNSYQQSSATSSYQQTNPYQQSCGPSIYQQSSATGVYQQSPGTSPYQQ
SSAPSVYQQSCGTSAYQHRSATSTYQQSSTSNSCHPSSGSYQSDHFRHKQHYPAVKSQSE
RRSPDRGRHHEHHHKGQGYRSHSERHRSDSHGDRRNRARSPERRRSESSRRRSSRDRGRS
PTRHRNRDHSRDRQKHRDSYRSPSYDRQHRRERKRTRSRSSSRERKRPRWEDEKERRREG
HSSSKEKSQPATRPKEIEENSLPEKVEEEKEDEDALSTKPVWIRCTHSENYYSSDPMDQV
GDSTVVGTSKLRNLYEKFEEELGQRQAKAKAARPPWDPPKTKLDEEIDVSSSESDCESDE
ESDDSSTCSSDSELIDVIEEIKRRKAHPDRLHEELWYNDPGQMNDGPLCKCSAKAKRTGI
RHSIYPGEEVHVACRPITNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYIFEGFSLF
SHTSLNNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSSFLFRDLLELYDWNILGP
RFEDGTPSCPRFHFMPRFVRSLPDSGKEVLSMHQVLHYLLRSSKALVPEEEIADMLQWEE
LEWQKYAEECKGMIVSYPGMKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQLSYAGD
PQYQKLWKSYVKLRHLLANSPKVKQADKQKLAQREEALQKIRQKNTMRREVTVELSSQGF
WKTGVRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYKFKQRCLLQLGMTHPSHHLNFG
MNPDHARNSLSNCGIRQPKYGDRKVHHMYMRKKGINTLINIMSRLGQDDPTPSRINHNER
LEFLGDAVVEFLTSVHLYFLFPNLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHG
PDLCRESDLRHAMANCFEALIGAVYLEGGLEEAKHLFGRLLFDGMDLREVWLNYPLHPLQ
LQESHSDRPLINTSPVLKKLTEFEEIIGVDFTHIRLLARAFTLRTVGYNHLTLGHNQRME
FLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQDFAITNDKTK
RPVALRTKTLADLLESFIAALYIDQELEFVRTFMNVCFFPRLKEFILNQDWNDPKSQLQQ
CCLTLRTEGKEPDIPLYKILQTVGPSHARTYTVAVYFKGERIGCGTGPSIQQAEMGAAMD
ALEKYNFPQMAHQKRFIERKYRQELREMRRERERQEKDPDETEESRK
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttcattcgggaagagggggatctgcacccactggccacgggacgttccctaaa
gctggagggcctcggggtagaggtgcgtcagggaatagaatgcctcaacaaacctttcag
cctccaagttatcggccgtcccatcctcagcagcccccaccgctacttctgtgtgaccag
caggttactccccctcccaggttcacaagcccacaaaacacaggctacgctcctcccaga
gcagacttcatgacctatccacccagcgttccccagccaggtgaggtggatattagacag
aatcctatgcatcaatgccctgtaagggcgagggcaccattccctagccctccggtccgc
caagggtttcctggcttgccttgctatcctcaggcccctcctgtgcccagtcccacgccc
gcagtgtcgggcacccctgacaggcaggatagtttccaccacttgatgccgtcagccccc
actcagccacctcccttgcttgccccaccccagcaaatcaactatcaggctccgtatacc
atgagctactcgcagcattttcagctgcagcattttgggaacagctaccagcagagttct
gcaaccagctcttaccagcagaccaatccctaccagcagagctgtgggcctagcatttac
cagcagagctctgcgactggtgtctaccagcaaagtcccgggaccagtccctaccagcaa
agctcggcccccagtgtgtaccagcagagctgtgggaccagtgcctaccaacacagatct
gcgacgagcacctaccagcagagctccacatccaacagctgccaccccagctcaggatcc
taccagtctgaccacttcagacacaagcagcactacccggcggtgaagtcgcaaagcgaa
cggcgctcaccagaccgcggccggcaccacgagcatcaccacaaggggcagggctacagg
agccacagcgagcgacacaggtcagactcccacggggatcgcaggaaccgggccaggagc
cccgaacgcaggaggtcagaaagcagccgccgcaggtccagccgtgatcggggaagatct
ccgacccgacacagaaatcgcgatcacagcagggatcgacagaagcaccgggacagctac
aggtccccatcttatgacaggcaacatagaagggagcgaaaaaggacacgcagccgttca
agcagcagagagaggaagaggcctcgctgggaggatgagaaagaacgaaggcgagaaggt
cactcctcaagcaaggagaaatctcagcccgccacccgacccaaagagatcgaggagaac
tccctccctgagaaagttgaagaagagaaagaggatgaagatgcactgagtacaaagcca
gtgtggattcgctgtactcactctgaaaattactattctagtgatcctatggatcaggtg
ggagactccactgtcgttggcacaagcaagcttcgaaatctttacgagaagtttgaagag
gaacttggccagagacaagctaaagccaaagcagctagaccaccgtgggaccctccgaag
accaaattggatgaagaaatcgatgtcagctccagtgagtcggactgtgaatcagatgag
gagagtgatgacagtagcacgtgcagctcagactctgaacttatcgacgtcattgaggaa
atcaagcgtagaaaggctcacccggatcggctgcatgaggaactgtggtacaatgatccc
ggccagatgaacgatggaccactgtgtaagtgcagcgcaaaggccaaacgaactggaata
agacatagcatctaccctggcgaagaggtccatgtagcttgtcgcccaataaccaacaat
gcaggtcgactgttccactacagaattactgtatctccacctactaactttttgactgac
agaccaactgtgatagagtatgatgaccatgaatacatcttcgaagggttttctctgttt
tcccacacgtctcttaataacattcctttatgcaaagtgatacgcttcaacattgactac
accattcatttcatagaggaaatgatgccagagaacttctgtgttaagggactggagctg
ttctcttcattcttgttcagggacttgttggagctgtatgattggaacattcttggtcct
cgctttgaagatggcactccatcctgcccacgatttcacttcatgccccgctttgttagg
tctctgcctgacagtgggaaggaggtgctttcgatgcaccaggtgctgcattatctcctg
cgcagcagcaaggctctcgttcccgaggaggagattgctgacatgttacaatgggaggag
ttggagtggcagaaatacgctgaggaatgcaaaggaatgatcgttagctaccctggcatg
aaacccagctctgttcgcattgaccagttggaccgggaacagtttaaccccgatgtcata
acttttccgattattgttcatttcgggatccgacctgcacagctgagctatgctggcgac
cctcagtaccagaaactatggaagagctatgtcaaactacgccatctgctggcaaatagc
ccaaaagttaaacaagcagacaagcaaaagttagctcaacgcgaggaagctttgcagaag
atacgacagaagaatactatgaggcgtgaggtaactgtagagctgagcagtcaagggttc
tggaagactggggtccgctctgatgtttgccagcatgccatgatgttgccagtgctgact
caccacatccgttaccaccagtgcctcatgcacctggataagttgataggttacaagttt
aagcaacgttgtctgctgcagcttggaatgactcacccgagccatcacctgaatttcggg
atgaatccagaccatgcaagaaactccctgtccaactgtggtatccggcaacccaagtat
ggagaccgaaaggtccaccacatgtacatgaggaagaaaggcataaataccttaataaac
atcatgtcacggctcggtcaggacgatccaactccatcgaggatcaaccacaatgaaaga
ctggagttcctgggagacgcagtggttgaatttttaacaagtgtgcacttgtactttctg
tttccaaacctggaggaaggaggcttagctacgtaccgcactgctattgttcagaaccaa
caccttgctatgctggccaagaaacttgaactggacagattcatgctttatgctcacgga
ccagacctctgtcgggaatcagacttacgtcacgctatggcaaactgctttgaagctcta
ataggtgcggtctatctagaaggtggtctggaagaagcaaaacacttgtttggtcgacta
ctgtttgatggcatggacctgcgggaagtttggcttaattatcctctgcaccctctgcaa
ctgcaggagtcacattctgacagacccctgatcaacacgtctcctgttctaaagaaacta
actgagtttgaagaaataattggagttgattttacccacatacggcttctggctcgagcc
tttaccctacgcactgttggatacaaccatttaactctaggtcacaatcagaggatggaa
ttcctcggtgactcgataatgcaattggtagccactgagtacttattcatacatttcccg
gaccaccacgaggggcacttaacgctgctacgaagttctctggtgaataaccgtactcaa
gccaaagtggcagaagaactaggcatgcaggactttgccatcactaatgataaaaccaaa
aggccagtagcactacgaaccaagactttggctgacctgctggaatcattcatagcagca
ctttacatcgaccaggagctggaatttgtccgtactttcatgaatgtatgtttcttccca
cgattgaaggagtttatcctaaaccaggattggaatgatcccaagtctcaacttcaacag
tgttgcctgacccttcgaacagagggtaaagagccagacatccctctgtacaaaattctt
cagacagtggggccatctcatgccaggacatacactgttgctgtgtactttaaaggggag
agaattggctgtggcactggtccaagcattcagcaagcagagatgggagcagcaatggat
gcattggaaaaatataactttccccagatggctcatcagaagcgcttcattgaacggaaa
tacagacaggagttgagagaaatgaggcgggaaagagaacgacaggagaaggatcccgat
gagactgaggagagcagaaaataa
DBGET
integrated database retrieval system
