Callorhinchus milii (elephant shark): 103179987
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Entry
103179987 CDS
T03088
Symbol
smg7
Name
(RefSeq) LOW QUALITY PROTEIN: protein SMG7
KO
K14409
protein SMG7
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103179987 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103179987 (smg7)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
103179987 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
103179987 (smg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
zf-AD
Motif
Other DBs
NCBI-GeneID:
103179987
NCBI-ProteinID:
XP_042190995
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MNPLCAQYLRQAEALKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSELGIISNKQCSTSGIVKPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDDV
KTKWNVSDFIKAFIKFHGHVYLAKSLEKLCGLRERLEEQFKKLLPQKAFSSQQLVHLTVI
NXFELHHLRDFSTEADDQSYSEEELLCWTQLLGLFMTFLGVMCKCALQDENLKEILGECP
LPAVKVSLDWLKLRPNVFQESALEERQHIWPWVVSLLNSFHPQEDELCSFNATPLPEEFE
LQGFLALRPSLRNLDFTRGHQGIVVDKEGQQLRTRHQRLLIFGKWIAENHSRLIQSKNEE
GKLLFLTNIAELVEDSESTDGLILLDSSFSEPTTEIGQGLKSVLSSGKTQGNSSESGEKL
VTFKENIKPREQNRNHHQKEGVKDRRDFSKGSDSANKMEIKRDSNKRKTEPKKNNNQEKN
MEHVRKQNVAVQVKAQTDLRKTPVSEARKTPVSQSQTQTSNSQFIPIHHPGAFPPLPSRP
GFPPPPYLVSPPVTFQMNPGYTFPPGVSIPGPYLQAAGHPQSGNQVPGGKQSHVPYSQQR
PSGQGPLNQGPQQQQGQQQQVPQSQLQVQTVNQQQSPTKPAQQMGKNQHHLGPQQYLQAD
QTNQLWNHHHPVPSQLQKTSIQMALKQPYYIHQDPLKLFEQSLQQNQVQMEKNMKVFPME
SFTQSPSDVHKMQEFAWDYSMSDMRHMMGGQHMNNDRLVKRQQGVFRSDQDSMPRMQSFE
DAKSSPLLPPDLLKSIADFEEEEELAFSKPHDFYQALAGSLGSASGRGFFMPNRSRLDRS
SELISSSSLLPLPPFPLNQENCQNNSIFSEVYGKHLAPSGKSENMPPHAFHEASCYSLFD
GNPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNQNCFSGFGPIGTPDNSERRLTD
RWNMKRTDKPAMSGFGLDYLPAASSSSDNSWHQGSTPSNTWAAPDTTLDDSSTLLLDSFK
SIWSSSMMHPGPSALEQLLMQQKQKQQRGIGTLNPPH
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgctctgcgcgcagtatttacggcaggcagaggccctaaaggctgacatgaca
gattcaaagctgggtccagctgaggtctggacatccagacaagctctgcaggacctttac
cagaaaatgttggtcacagacttggagtatgcactggataagaaggtggagcaagacctt
tggaatcatgccttcaaaaatcaaattactacactacagggtcaagccaagaatcgagcc
aatccgaatcgtagcgaggtacaggccaacctttcactcttcttagaggcagctagtggc
ttctacacacagttgttgcaggagctgtgcacggttttcaacgtggaccttccctgtcgt
gttaaatcctcagagctaggaattatcagcaataaacagtgcagcaccagtggcattgtg
aagccccaacctagttcttgctcttatatctgccagcactgccttgttcacctcggagac
atagctcgatacagaaatcaaaccagccaggctgagtcttactacaggcatgcagctcaa
cttgttccatccaatggtcagccgtataatcagctggcaatcctggcttcctctaaaggt
gatcaccttacaacaatcttctactattgcagaagtattgctgtcaaatttcctttccca
gctgcttccactaatctgcagaaagcgctttctaaggctttggagagccgtgacgatgtg
aagacaaagtggaatgtttctgacttcataaaggcttttattaagttccatggacatgtc
tatctggctaaaagtttagagaagttgtgtggactgagagagaggctggaggaacaattc
aagaaacttcttccgcagaaggctttcagttctcagcagcttgtacatctcacagttatc
aacntgtttgaattgcaccatttgcgggattttagcacggaggctgatgaccagagctat
agtgaggaggaactactttgctggacgcaactccttggcctcttcatgacgttccttggc
gtcatgtgcaagtgtgcattacaggatgagaatcttaaagaaatcttgggtgaatgcccg
ctaccagctgttaaagtttcattggattggctgaaactcagacccaatgtctttcaggag
agtgcattagaggaaaggcaacacatttggccctgggttgtatcgttgctgaacagtttt
catccacaagaagatgagctgtgtagctttaatgccactcctcttcctgaagaatttgag
ctgcagggattccttgctctcaggccttccctaaggaatctcgatttcacaagggggcac
caaggaattgtagtggacaaagagggccagcagctaaggacccggcaccagcgattgctt
atttttggaaaatggatagcagaaaatcattccagacttatccagagcaaaaatgaggaa
ggcaaactactgttcctaactaacatcgcagaactggttgaggattctgagtccacagat
ggactgatcctcctggattcttccttttcagaacccaccacagagattggtcaggggtta
aaatcagtcttgtcttcaggcaagactcagggcaacagctcggaaagtggggagaaactc
gttactttcaaagagaatattaaaccacgggaacagaatcggaatcaccaccagaaagaa
ggtgtgaaggataggcgggactttagcaaaggaagtgacagtgcaaacaaaatggagata
aaaagagacagcaataagagaaagactgaaccaaagaaaaacaacaatcaagagaagaat
atggaacatgtgcgaaagcagaatgtggctgttcaggtaaaagctcaaacggatctgaga
aaaacaccagtgtcggaggctaggaaaactccagtgagtcagtcacagacccagaccagc
aactcgcagtttatccccattcaccatccaggagcatttcctcctcttccgagccgacca
gggtttcctccacctccctatctggtgtctccacctgttactttccagatgaatcctggt
tatacatttccacctggggtctccataccaggaccctacctccaagccgctggccaccct
cagtcaggaaaccaggtgccaggtgggaaacagtcccatgtcccttacagccagcagcgg
ccatcggggcaagggccactaaaccaaggtccccaacagcaacaaggtcagcaacaacag
gtgccccagtcccagctccaggtgcagactgtgaaccagcagcaatcacccaccaagcca
gcacaacagatgggaaagaatcagcaccaccttggacctcagcagtatctgcaggctgac
cagaccaaccagctgtggaaccaccatcacccggtcccctctcaacttcagaagacttct
atccagatggctttaaagcagccctattacatccatcaggacccattaaagctgtttgaa
cagtcacttcagcaaaatcaagtgcaaatggaaaagaacatgaaggttttcccaatggaa
tcgtttactcagagtccttcagatgtgcataaaatgcaggagtttgcctgggactatagc
atgtcagatatgcggcacatgatgggggggcagcatatgaataacgatcgtctggtgaag
cgacagcaaggcgtcttccgatctgaccaggacagtatgcctagaatgcaatcatttgag
gatgccaagagctcacctctgttgcctcctgacctgttaaaaagtattgctgactttgag
gaggaggaggagctggctttttccaaaccccatgatttctaccaggctttggctggctct
ctgggcagtgcttctgggagaggtttctttatgcctaacagatctcggctggacaggtcc
tcggagttgatttcttcctcctctttattgcccttgcctccttttccactcaatcaggaa
aactgtcagaataacagcattttcagtgaggtttatggcaagcacctagcacctagtggc
aaatctgagaatatgccaccacacgcattccacgaggcctcctgttattcgctgtttgat
ggaaatccttggtctccatcccttcctgccagttcagatcactcaacaccagcaagccag
tctcctcactcctccaatcctagcagcctacccagctctcctccaactcacaaccagaac
tgtttctctggttttggaccgattggaactcctgacaacagtgagaggagactgactgac
cgctggaacatgaagcgtacagacaagccagcaatgagtggatttggcttggactatctg
cctgctgcatcttcgtcttcggacaacagctggcatcagggcagcactcccagcaacaca
tgggccgccccagacaccacactggacgactcgtccacgctgctcttggacagtttcaag
tcgatctggtccagttcgatgatgcatcctggaccctccgcactggagcagctgctaatg
cagcagaaacagaagcagcagcgaggaatcggcacactgaacccaccacactga
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integrated database retrieval system
