Callorhinchus milii (elephant shark): 103179998
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Entry
103179998 CDS
T03088
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103179998 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103179998 (tprb)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103179998 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
103179998
NCBI-ProteinID:
XP_007893774
LinkDB
All DBs
Position
Unknown
AA seq
2395 aa
AA seq
DB search
MAAALQQLLERSELAKLPKATVSKLEKLLSDKEAEADGLKVKYERFKVDSEQQYFEVEKR
LTQSQEKLVLESQECQNLREELTKLNDQLTETKEKNKELDSSQENLKNSQNQLSRAKDEL
DNEKRELVRTLERRSQELEHLNEDFKRLNTKLAETNSAKIDLQLKLDELQVSEISIKYRE
KRLEQEKELLQNQTNWLNAELKKKTDELLGLRREKSNEILELRCNLENKKDEVSSIEEQI
STLKGANENFKKQIDDLMSKLKESKEHSASMEEKFRNELNAHIKLSNLYKSAADDSEAKA
AELTGAVEELHSLLKQANEAHKQSEERVAETVASNAKLITDLNEKVGKLEKELENANDLL
VATKRKGIATLSEEELAAMSPTAAAVAKVIKPGMKLTELYNAYVEAQDQLLLAKQENKRV
NKYLDEIVKEVEMKAPILKRQREEYERGQKAVANLSAKLEEAMKEMRRLQKDTDEANKSS
TLLGRENQRLKMQMTDLSQQTRILLMELEDSRGNHVLREDEVSSADISSSSEVISQHLVT
YRSIEELQQQNQQLLLTLRELAEKHEKEEEEKASSRIKGLESDLSKSLVELEGLREARNH
QMQMVESIVRQRDMYRILLAHTTGVSIPIQDKAPGEMSLISSLPKHSPGLSKEMPQMAST
PSQIPALETTELVQAKAALKQLQLHFETYKKEKAENDKMLNEQNDKLQDGLTQLRTQNTK
LSTQLEFASKRYEMLQNNIDAFRREISSLRDRGQKLTTTVQKQEHIICSLTQELRGSNEK
LAIEEARGENLRKEKDMLKMVEARLTQERDSKLAEHRGQSLLLTNLQSIQLSLERAETET
RQRLNNQIERQEREITQLKKKLENEVEQRHFLGRNQDVQLVEIKKQYETELGLHVKTKDL
LKNAEKEASTLKQQLSNAETQLVSHTQGGGSKGDSNGEEDVDNLRSRLRQAEEQTNDLRE
RLKTTTSNLEQYRGMVLSLEDSISKEKQVTEEVRAAVESRLTESAEYQAQLEKRLMEAEK
EKQDLTDEKRKTIENLEQQMSDLRKNLSSLQAELQEALQRATGAANNEQQARADCQEQAR
IASEAQNKYERELILHAADVEALQTAKEQVAKTSQLRQQLEDTAQKAEAQLLEMKTAKEE
LEQMLKAEIVKQTAHCEDLQKQNKLLLEQVEGLSNKMVTTVQDASQSCMNISFSEEGKSQ
EQLLEILRFVRREREIADTKFEVAQVECLRYRQRMENLEREMKEVQNNLNSEREKVQVTA
KTLAQHDELMKKTETMNVLIETNKMLRDERERLEQELQQSHSKIRKLESDILPLQESNTE
LSEKSGMLQAEKKLLEEDLKRWKARAQQLISQQKETDPDEYKKLLSEKDVNAKRIQQLTE
ETGKLKTDIARLNASSTTSQRDVQTLRIEVTRVTTERDNLKQEMVTKVAENLEKIKTITQ
VKKIGRRYKTQYEELKVQYDKMVVEKSSQRTAEQQAEQSSAQATQELQEILSQSESRTKA
LESQTEALQKSINEKESEVKTLQVEVSQQQGELSRLRQELQEKSTLEDQLRQQITEKEEK
MKKAIVGAKQKISQLVGVKDQMGKENEELKQRNEEFKQRIATMDQQREELEVRMSALKSQ
YDGHIARLKRELKEHQDRQHEQREEPQELASKASEPQRQLDQQRQITLKQTPASTDRGSS
SASEPPTANIKPTPLVATPSKVPAGTVPGSKSTPRASIRPMVTPATVTAPATTPTATVMP
TTQVESQEATIQPEGPVEHVTVFGSASGTVRSTSPNIPNLSQPILTVQQQQTQATAFVQP
TQQTLQQVEPANQEPSATIVELVQTSQIERPSTSTAVFGTVSATTSISKRQRDEEEETSV
ENTDHAQEESVDQPQSKKLRIVQRVGPEEEHVQDIEGNAEVVTEMQLQTDHLGSQDSITQ
VVIEEDYPPSQLMEDSQEASQTLPLELVPQPPEHQQSTQSSQDSQPPDVIIIDSDEEDEA
ENEEDQEQEYDEEEEDDEDEDDDTGIEDGDGEDSNEGSPGAEDNYDGDDAEGAEGTDPST
DNEQSMSSAKEGESIQRPEDIQDNSGGGEGGMSTVEPFGSDAPREHQSVAERQTPRPPRS
PRRPPHHLPPRLTIQPPAQELGPPAQRFPPARRPSSSRGGIQLTPGIAGVQQHFFDEDDR
MVPSTPTLFVPHRSDGFAEVIHSPQVTAVPSFGFGLSEDLSQTSSSQSDLGQLASQGGLG
MYETPICLAAVHEDESGGRSVPTTPLQVHAPVTVFNEGIQSDGTEHASQSVPMVTTTLTS
LSNTVESGGGGDDGDEVFVEGGEQEGLGSDALLEIEGQQEEEAVQPSEEADLPSTSQDPP
SSSADASSTQPKPLRRVRLHPQMGRTVGRGRQFQNRRGMSHAMGGRGGLNRGNLG
NT seq
7188 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgctgcagcagttgctggagcgctccgagttggccaaactccccaaggcc
acggtcagcaagctggagaagctgctgtccgacaaggaggccgaagcggacggcctgaag
gtcaagtacgagcgctttaaagtggacagtgagcaacaatactttgaagtagagaaacgg
ctcacccagagccaggaaaagttggtattagaatcacaggagtgtcaaaatctgcgtgaa
gaacttaccaaactcaatgatcaattaacagagactaaagagaaaaataaggaactagac
tcttctcaagaaaatttaaaaaattctcagaaccaactttcacgagcaaaggatgagttg
gataatgaaaaacgagaactggtgaggactcttgaacgaagatcgcaagaactggaacat
ttgaatgaggattttaaacgattaaatactaagcttgcagaaacaaattcagcaaaaata
gatcttcagctgaagctcgatgaactccaggtttctgaaatctcaatcaagtaccgtgaa
aaacgacttgaacaagaaaaggaactattgcagaaccagaccaattggttgaatgcagaa
ttaaaaaagaagactgatgagctgttgggacttcgtcgagaaaagagcaatgaaattctt
gaactgagatgtaatctcgagaacaaaaaggatgaggtctccagtattgaagaacagatt
agcactttaaaaggagctaatgaaaatttcaagaaacagattgatgacttaatgagtaaa
ctgaaagagtcaaaggagcattcggcgagcatggaggaaaaattccgcaatgagctgaat
gctcacataaagttatcaaacttatacaagagtgctgcagatgattctgaagctaaggct
gcagagcttaccggagcagttgaagagcttcatagccttctgaaacaggctaacgaggcc
cataagcaaagcgaggagcgagtggctgagaccgtggcctccaatgccaaactaattact
gacctgaatgagaaggtcggtaagcttgagaaggaattggaaaatgctaatgatctcctt
gtagccaccaaacgtaaaggtatagccaccctctcagaggaagaacttgctgccatgtcc
ccaactgcagcagctgttgctaaagttataaaacctggaatgaagcttactgagttatac
aatgcatatgttgaagcccaggatcagctgttgctggcaaaacaggaaaacaagcgggta
aataagtacttggatgagattgtgaaagaagtggagatgaaggctccgattttgaaacgc
cagcgggaggaatatgaacgtgggcaaaaagccgtagcaaatctctcagcaaaactggaa
gaagccatgaaggaaatgcgtcgattacaaaaagataccgatgaggctaataagagttct
acgttgctcggcagggagaatcaaagattaaaaatgcaaatgactgacctctctcagcag
actagaattcttttgatggaactggaagattcacgagggaaccacgttttgcgagaagat
gaagttagctcggctgatattagcagttcatctgaagtaatttcacaacatttagtcact
tatcgtagcattgaagaactccagcagcagaaccagcagctgctactgacccttcgtgaa
cttgctgagaaacatgagaaagaagaagaggaaaaggcctcatcacgaattaaaggactt
gagtctgatctttcgaaatccttagtcgaactggagggtctccgtgaagcacgaaatcat
cagatgcaaatggttgaatcgattgtacggcagcgtgatatgtaccgcatactactcgca
catacgactggagtttcaattccaatccaagataaggcaccaggagaaatgtctttaata
tcgtctcttccaaaacactccccaggattgagtaaggaaatgcctcagatggcatcaaca
cccagtcagattcctgcattggagaccacagagcttgtacaagccaaggcagcactaaag
cagttacagttacattttgaaacctacaagaaggaaaaagcggagaacgacaagatgcta
aatgagcagaatgataagcttcaggatggcttaacacagctgcgaacccagaatacaaaa
ttgtctacacagctagagtttgcttccaaaaggtatgagatgctgcagaacaatatagat
gcattccggcgtgaaatatcatcactgcgtgataggggtcagaaactcaccacaactgta
cagaaacaggagcacattatctgcagtttgacacaggaactgcgaggatcaaacgaaaag
ttggctatagaagaggctcgaggggaaaatttgaggaaagagaaagatatgttgaagatg
gtggaagcgcgtttgacccaagagcgtgactctaagttagcagaacacaggggacaaagt
ttgctgctgacaaatctacagtccattcagttgagtctggagcgcgcagagactgagacc
agacaacgcctgaataaccagattgaaagacaagaacgagaaataacacagttaaaaaag
aagttggaaaatgaagtggaacagcgacattttcttggaaggaaccaagatgtgcaactt
gtggaaatcaaaaagcagtatgaaactgaattaggtctccatgtcaagacaaaggaccta
ttgaaaaatgcagaaaaagaagccagcactttgaaacagcaactttccaatgctgaaact
caactggtatcgcatactcaaggaggaggatccaaaggggattcaaatggagaagaggac
gtggacaatctaagatcacggcttcgccaggcggaggaacagacaaacgacctcagggag
cgcctcaagacaaccacaagcaatttggagcagtacagaggcatggtgcttagtctggaa
gactctatcagcaaagagaagcaggtgactgaggaggttcgagcagctgtggagtctcgg
ctcactgagtctgcagaatatcaggcacagttagaaaagcgtttaatggaagctgagaaa
gaaaaacaagatttgactgatgaaaagcgcaaaactatagaaaatctggaacagcagatg
tctgacctaaggaagaatctgagcagcctccaggcagaacttcaggaagctcttcaacga
gcaactggtgctgcaaacaatgaacagcaagcaagggcggattgtcaggaacaggcaagg
atagcctctgaagcacagaataagtatgagcgggaactgatacttcatgctgctgatgtg
gaagcactgcagactgctaaggagcaggtagccaagacctcccagttgcggcaacagcta
gaggatactgctcagaaggctgaagctcagctgttggagatgaagacagccaaggaagaa
cttgaacagatgttaaaggctgaaattgtgaaacaaacagcacattgcgaggatctgcag
aaacagaacaagctgttgcttgagcaggtcgagggcctcagcaataaaatggtgaccact
gtacaagatgcaagccagagttgcatgaacatttctttcagtgaggaggggaaatcccag
gaacaattgcttgaaattcttcggtttgtgcggcgagaaagagaaattgcagacacaaag
tttgaagttgcccaggtcgaatgccttcgttatcgccagagaatggagaatttagagagg
gaaatgaaggaagtgcaaaataatctcaactctgaaagggaaaaagtgcaggtaactgca
aaaaccttggcacaacacgatgagctgatgaagaaaactgaaactatgaatgttttaatc
gaaaccaataagatgctcagagatgagcgggaaagactcgagcaagaactccagcaatct
cattcaaagattcgcaagctggaatctgacatcctgcctcttcaggagtccaacacggaa
ctgagcgagaaaagtggaatgttacaagctgagaagaaacttctggaagaggatctgaaa
cgctggaaagcacgtgctcagcaacttatcagtcagcagaaagagactgacccagatgaa
tacaaaaagttactgtctgagaaagatgtaaatgcaaagcgtattcaacaactgactgaa
gaaaccgggaaactgaagactgatattgcaaggttgaatgcatcgtccactacgtcacag
cgtgatgtgcagactttgaggattgaagtaactcgagtgaccactgaacgagataacctg
aagcaagaaatggtgacaaaggttgcagaaaacctggagaagatcaaaaccatcacccag
gttaaaaagatcggtcgccgttacaagactcaatatgaggagctaaaagttcagtatgac
aagatggttgtcgagaaatcctctcaacgtacagcagagcagcaagcagaacagtcctct
gcccaagccactcaggaattgcaggaaattctatcccagtctgagtccagaaccaaggct
ctggagtctcagactgaagccttgcagaagtctattaatgagaaagaatctgaagtgaaa
acattgcaagttgaagtatcacagcaacaaggagagctttctcgcttacgccaggaactg
caggaaaaatcaacgctcgaggatcaacttcgacagcagattacagagaaggaagagaag
atgaagaaagcaatagtgggagccaaacaaaagatctcgcaactagttggtgtaaaggac
caaatggggaaggaaaatgaagagctgaagcagcgcaatgaagaatttaaacaacgtatc
gcgactatggaccagcagagagaggagctggaggtgcgcatgagtgcactcaaatcacag
tacgatggtcatattgctcgtctgaaacgagagctgaaagagcaccaggatcgacaacat
gagcaacgtgaggaaccccaggaactagccagcaaggcttctgaaccacagagacaactg
gatcaacagaggcagattacactgaaacaaactccagcatctactgatagaggaagttcc
agtgcttccgagcctccaacagctaacatcaagcccactcccctggtggcaacgcccagt
aaagtgccagctggcaccgtacctggtagtaagtcaacaccaagagccagtatccgtcca
atggtcactccagcaacggtgactgcaccagctacaacacccacagccaccgtaatgccc
accacacaagtggagagccaagaagctaccatacagccagagggaccagttgaacacgtt
acagtttttggaagtgcaagtggaacagttcgctcaacgagtcccaatatcccaaacttg
tcacagcccattttaacggtccaacagcagcaaacccaggccactgcttttgtgcaacct
acccaacagactcttcagcaggtagaaccagcaaatcaggagccgtcagccaccattgta
gagcttgtacagacctcacagatagaaagaccttccacttctactgctgtgtttggaaca
gtttcagcaactacttctatatccaagcgtcagcgcgatgaagaggaagagaccagtgtg
gaaaacacagatcatgctcaggaagaatctgtggaccagccacagtctaagaaattgaga
attgtccaacgagttggccctgaggaagagcatgtgcaggacattgaaggaaatgcagaa
gtggtaactgaaatgcagcttcagacagatcacctgggttcacaagactccatcacacag
gtagtcattgaagaggactatcctccttctcaactaatggaggacagccaagaggcttct
cagactttaccattagaattggtgcctcaaccccctgaacatcagcagagcacccagtca
tcccaagattcacagccacccgatgtcatcattatagacagtgatgaagaggacgaggca
gaaaatgaagaggaccaagagcaggagtacgacgaagaggaagaggatgatgaggatgaa
gatgatgatactggaatcgaggatggtgatggagaggacagcaatgagggcagtcctggt
gcagaagataattatgatggtgatgatgcagagggtgcagagggtacagaccccagtaca
gataatgagcaaagtatgagcagtgctaaggaaggtgaaagcatccaaagaccagaagac
attcaagataattctggaggaggtgaaggtggtatgtccactgtggaaccttttggttca
gatgcaccaagagagcaccaatctgtagctgaaaggcagactccccgaccaccacgatcg
ccacggagacctccgcatcatcttcctccaagactaaccattcaacctccagcacaggaa
ttggggccccctgcccagcggttcccaccagccaggcgtccgtcatcaagccgaggagga
atccagctgactccaggcatcgcaggagtgcaacaacacttctttgatgaagatgacagg
atggtgccaagcacaccaactctttttgtgccccaccgatcagatggatttgcagaagtc
attcattcacctcaggtcactgctgtaccaagcttcgggtttggtctctctgaggatctt
tcgcaaaccagttcaagccaatcggatcttggacaactagcatcacaaggaggcctggga
atgtatgaaactcccatttgtcttgcggccgttcatgaagatgagtctggaggtcgcagt
gtgcccactacaccactccaggttcatgcaccagtgactgttttcaatgagggcatacaa
tcagatggaacagagcatgcctcccaatccgttcctatggttacaacaactctgaccagt
ctgtcaaatactgttgagtctggaggtggtggggatgatggagatgaagtgttcgtggaa
ggaggcgaacaagagggccttggctcagatgctctgctggaaattgagggacaacaggag
gaggaagctgttcagccatccgaagaggcagacctgccatccactagccaggatccaccg
tccagttcagcagatgccagcagcactcagccgaaacccttgcgaagggtccgacttcac
ccacagatggggagaactgttggtcgagggcgacaattccaaaatcgaagaggtatgagc
catgcaatgggaggaagaggaggtctaaatcgtggaaatttgggttga
DBGET
integrated database retrieval system
