KEGG   Callorhinchus milii (elephant shark): 103180174
Entry
103180174         CDS       T03088                                 
Symbol
wdr3
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103180174 (wdr3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cmk03009]
    103180174 (wdr3)
Ribosome biogenesis [BR:cmk03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    103180174 (wdr3)
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Utp12 Beta-prop_CAF1B_HIR1 DSE1_N ANAPC4_WD40 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_NOL10_N Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_WDR41 ASA1 CFAP251_N Beta-prop_Aladin WDR54 Beta-prop_ACSF4 PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_LRRK2 B-prop_COPA_B_2nd Beta-prop_NUP159_NUP214 WD40_like Beta-prop_IP5PC_F PAC11 Beta-prop_RIG_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 103180174
NCBI-ProteinID: XP_007894057
UniProt: A0A4W3GL07 V9KCS5
LinkDB
Position
Unknown
AA seq 938 aa
MGLTKQYLRYAATAVFGVIASPKANVVYVQLRGEKGRYVAVAACEHVFIWDIRKGEKILI
LQGIKHEVTYLCSSPDGRHLAVGYEDGSIRIFNIMTGESNVTFNGHKSSVSILNYDSLGA
RLVSGSKDTEIIVWDIVNESGLYRLKGHKDVITQAMFLKDKNLLVSSSKDTFVKWWDLDT
QHCFKTMVGHRSEVWGFVLLSEEKRIVTGSSDSELRAWDICYLDEKKELGEPDMKKTKGH
LVHTEETERELNENPEELILTCQKAGSMLRDGRNRVVSFRADQSSKIVACHGTDNVLEVF
MALSEEEVKKRIEKKQKKVKKRAKKRAESGEADTDLEIAVQQSLEDELERITNIKASAKI
RSFDSLLASNGELKVVMLLQNNTVEAYTLNHTVKLPECTKTARITLAGHRTDSRTLAFSS
DNIAILSASAETIKIWNRSTLQCIRTMECEYALCSLFVPGDRQIIIGTKSGKLQLFDLAS
GRLLETIDAHKGAVWSISLAPDQRGFVTGSADKVVKFWEFELVKDEESSQKRLSLNHIRS
LQLDDDILCVSYSPNQRMLAVSLLDCTVKIFYTDTLKFFLSLYGHKLPVLCMDISYDSTL
IATGSADRNVKIWGLEFGDCHKSLFAHDDSVMCLRFVAKTHLFFTAGKDRKVKQWDADKF
EHIQTLEGHHGEVWCLAISPNGDHVVSSAHDKSLRLWERTRETIILEEEREMQREAEYEE
SVAKESGPVVPGEQEGEAGLAGKKTIETVKATERIMEAIELYREETTKLEEHREACKRAG
KELPPPTNPILTAYGNISPSRYVLDVIRKVKSSELEESLLVLPFSYTPDLLTLFNEYIQH
SLEVELICRCLFFLLRIHFGQITGNQMLLTVMDSLRQNTIGKINAMRDVMGFNLAGLQFL
QREIEAKEDVTFFADATEQFNEKKRKRKKRERVILTVV
NT seq 2817 nt   +upstreamnt  +downstreamnt
atgggcctgacaaagcagtacctgcggtacgccgccacggcggtttttggagtgatcgca
agccccaaagccaacgtggtttacgtgcagctgcgaggagagaagggtcggtacgtggcg
gttgctgcgtgtgagcatgtgttcatctgggatataaggaaaggagaaaagatattaatt
cttcagggtattaaacatgaagtgacgtacttgtgctcctctcccgatggccgtcacctg
gcggttgggtatgaagatggctcaatacgaatattcaacataatgactggagagagcaat
gtcactttcaatgggcacaaatcatcagtatccattcttaattatgatagtcttggagca
cggctagtatctggatcaaaggacacagaaatcattgtatgggatattgtcaacgagagt
ggtttatacagactgaaagggcacaaagatgttattacacaagcaatgtttctcaaagac
aagaaccttctggtctccagttccaaggacacatttgtgaaatggtgggacttggataca
caacattgcttcaaaaccatggtcggacatcgtagtgaggtgtggggatttgtattgctt
tcagaggagaagcgaatagtgactggatcatctgacagtgaactccgagcatgggacatc
tgctatctggatgaaaagaaggaacttggagaaccagatatgaaaaagacaaagggtcac
ctggtacacactgaagaaactgaaagggagctgaatgaaaacccagaggagcttatactg
acctgtcagaaagctggatccatgcttcgggatggcagaaatcgtgttgtttccttcaga
gcagatcaaagcagcaaaattgtagcctgccatggtacagataatgtgcttgaggttttc
atggccctcagcgaagaggaagtcaaaaaaaggattgaaaaaaagcaaaagaaagtgaag
aaaagggcaaaaaaaagggccgagtcaggcgaagctgatacagacttggagattgctgtg
caacaaagcctagaggatgagcttgagcgaatcaccaatattaaagcctcggcaaaaatc
agatcgtttgactctctgttggcatcaaatggggagctgaaggttgtgatgctgctacag
aacaacacagttgaggcctacacgctgaatcatacagtgaagttaccagagtgcacaaag
acagccaggataactcttgcaggtcaccggaccgacagtagaacccttgctttcagttcg
gacaacattgcgatactctctgcatcagctgagacaataaagatatggaacaggtccact
ctacagtgtattaggaccatggaatgtgaatacgctctctgctctctctttgttcctgga
gacaggcaaataattataggaactaagtctgggaaactgcagctctttgatttggcttca
gggcgtttgttggaaaccattgatgcccacaaaggagcagtgtggtccatatcactggca
ccagaccagcgtggatttgttactggaagtgctgataaggtggtgaaattttgggagttt
gagttggtgaaggatgaagagtcttcccagaaaaggctctctttgaaccacatccgaagc
ctgcagctggatgacgatatcttgtgtgtgagctacagccccaatcagagaatgctggca
gtatcactgctcgattgtacagttaaaatattctacacggacacactcaagtttttcctg
tctctgtatggacataagttgcccgttctctgtatggatatatcgtatgacagcacactg
atagcaactggttcagctgacaggaacgtgaagatctggggattagaattcggtgattgt
cacaagtctctcttcgctcatgatgacagtgtaatgtgtttgcggtttgtagcaaaaacc
cacctcttcttcactgctgggaaagatcggaaagtcaaacagtgggatgctgacaagttt
gaacacatccagacactggaaggacatcatggagaagtctggtgtctggccatcagtccc
aatggagatcatgtggtttcttccgcacatgataaatctctacgattgtgggagcgaact
agagagacaatcatcctggaggaagagcgagaaatgcaaagagaagcagaatatgaagag
agtgtggcaaaggagagtggacctgtggtgcccggagagcaagagggggaggcaggcttg
gccggaaagaagacaatcgaaactgttaaagctacggagcgcatcatggaagcgattgag
ctgtatcgggaagagacaacaaaattggaggagcacagagaagcttgcaaacgtgctgga
aaagagctgcctcctcctactaaccccatactgactgcatacggaaacatatcaccatct
cgatatgtcttggatgtcattcgaaaagtcaaatcaagtgagctagaagaatcactgctt
gtccttccattttcctacactcctgatctgctcactctgttcaatgagtacatccagcat
tctctagaagttgaactcatttgccgatgtctttttttcctgctcaggattcattttgga
cagatcactggtaatcagatgctcctaacagtaatggacagcttgagacaaaatacaatc
ggaaagatcaatgctatgagggatgtaatgggcttcaatttggcaggacttcagtttcta
cagagggagatagaagccaaagaagatgtgactttctttgctgatgcaaccgagcaattc
aatgagaagaagaggaaaagaaagaaacgggagagggttattctcactgttgtgtaa

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