Callorhinchus milii (elephant shark): 103180174
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Entry
103180174 CDS
T03088
Symbol
wdr3
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103180174 (wdr3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmk03009
]
103180174 (wdr3)
Ribosome biogenesis [BR:
cmk03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103180174 (wdr3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Utp12
Beta-prop_CAF1B_HIR1
DSE1_N
ANAPC4_WD40
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_NOL10_N
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_WDR41
ASA1
CFAP251_N
Beta-prop_Aladin
WDR54
Beta-prop_ACSF4
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_LRRK2
B-prop_COPA_B_2nd
Beta-prop_NUP159_NUP214
WD40_like
Beta-prop_IP5PC_F
PAC11
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
103180174
NCBI-ProteinID:
XP_007894057
UniProt:
A0A4W3GL07
V9KCS5
LinkDB
All DBs
Position
Unknown
AA seq
938 aa
AA seq
DB search
MGLTKQYLRYAATAVFGVIASPKANVVYVQLRGEKGRYVAVAACEHVFIWDIRKGEKILI
LQGIKHEVTYLCSSPDGRHLAVGYEDGSIRIFNIMTGESNVTFNGHKSSVSILNYDSLGA
RLVSGSKDTEIIVWDIVNESGLYRLKGHKDVITQAMFLKDKNLLVSSSKDTFVKWWDLDT
QHCFKTMVGHRSEVWGFVLLSEEKRIVTGSSDSELRAWDICYLDEKKELGEPDMKKTKGH
LVHTEETERELNENPEELILTCQKAGSMLRDGRNRVVSFRADQSSKIVACHGTDNVLEVF
MALSEEEVKKRIEKKQKKVKKRAKKRAESGEADTDLEIAVQQSLEDELERITNIKASAKI
RSFDSLLASNGELKVVMLLQNNTVEAYTLNHTVKLPECTKTARITLAGHRTDSRTLAFSS
DNIAILSASAETIKIWNRSTLQCIRTMECEYALCSLFVPGDRQIIIGTKSGKLQLFDLAS
GRLLETIDAHKGAVWSISLAPDQRGFVTGSADKVVKFWEFELVKDEESSQKRLSLNHIRS
LQLDDDILCVSYSPNQRMLAVSLLDCTVKIFYTDTLKFFLSLYGHKLPVLCMDISYDSTL
IATGSADRNVKIWGLEFGDCHKSLFAHDDSVMCLRFVAKTHLFFTAGKDRKVKQWDADKF
EHIQTLEGHHGEVWCLAISPNGDHVVSSAHDKSLRLWERTRETIILEEEREMQREAEYEE
SVAKESGPVVPGEQEGEAGLAGKKTIETVKATERIMEAIELYREETTKLEEHREACKRAG
KELPPPTNPILTAYGNISPSRYVLDVIRKVKSSELEESLLVLPFSYTPDLLTLFNEYIQH
SLEVELICRCLFFLLRIHFGQITGNQMLLTVMDSLRQNTIGKINAMRDVMGFNLAGLQFL
QREIEAKEDVTFFADATEQFNEKKRKRKKRERVILTVV
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgacaaagcagtacctgcggtacgccgccacggcggtttttggagtgatcgca
agccccaaagccaacgtggtttacgtgcagctgcgaggagagaagggtcggtacgtggcg
gttgctgcgtgtgagcatgtgttcatctgggatataaggaaaggagaaaagatattaatt
cttcagggtattaaacatgaagtgacgtacttgtgctcctctcccgatggccgtcacctg
gcggttgggtatgaagatggctcaatacgaatattcaacataatgactggagagagcaat
gtcactttcaatgggcacaaatcatcagtatccattcttaattatgatagtcttggagca
cggctagtatctggatcaaaggacacagaaatcattgtatgggatattgtcaacgagagt
ggtttatacagactgaaagggcacaaagatgttattacacaagcaatgtttctcaaagac
aagaaccttctggtctccagttccaaggacacatttgtgaaatggtgggacttggataca
caacattgcttcaaaaccatggtcggacatcgtagtgaggtgtggggatttgtattgctt
tcagaggagaagcgaatagtgactggatcatctgacagtgaactccgagcatgggacatc
tgctatctggatgaaaagaaggaacttggagaaccagatatgaaaaagacaaagggtcac
ctggtacacactgaagaaactgaaagggagctgaatgaaaacccagaggagcttatactg
acctgtcagaaagctggatccatgcttcgggatggcagaaatcgtgttgtttccttcaga
gcagatcaaagcagcaaaattgtagcctgccatggtacagataatgtgcttgaggttttc
atggccctcagcgaagaggaagtcaaaaaaaggattgaaaaaaagcaaaagaaagtgaag
aaaagggcaaaaaaaagggccgagtcaggcgaagctgatacagacttggagattgctgtg
caacaaagcctagaggatgagcttgagcgaatcaccaatattaaagcctcggcaaaaatc
agatcgtttgactctctgttggcatcaaatggggagctgaaggttgtgatgctgctacag
aacaacacagttgaggcctacacgctgaatcatacagtgaagttaccagagtgcacaaag
acagccaggataactcttgcaggtcaccggaccgacagtagaacccttgctttcagttcg
gacaacattgcgatactctctgcatcagctgagacaataaagatatggaacaggtccact
ctacagtgtattaggaccatggaatgtgaatacgctctctgctctctctttgttcctgga
gacaggcaaataattataggaactaagtctgggaaactgcagctctttgatttggcttca
gggcgtttgttggaaaccattgatgcccacaaaggagcagtgtggtccatatcactggca
ccagaccagcgtggatttgttactggaagtgctgataaggtggtgaaattttgggagttt
gagttggtgaaggatgaagagtcttcccagaaaaggctctctttgaaccacatccgaagc
ctgcagctggatgacgatatcttgtgtgtgagctacagccccaatcagagaatgctggca
gtatcactgctcgattgtacagttaaaatattctacacggacacactcaagtttttcctg
tctctgtatggacataagttgcccgttctctgtatggatatatcgtatgacagcacactg
atagcaactggttcagctgacaggaacgtgaagatctggggattagaattcggtgattgt
cacaagtctctcttcgctcatgatgacagtgtaatgtgtttgcggtttgtagcaaaaacc
cacctcttcttcactgctgggaaagatcggaaagtcaaacagtgggatgctgacaagttt
gaacacatccagacactggaaggacatcatggagaagtctggtgtctggccatcagtccc
aatggagatcatgtggtttcttccgcacatgataaatctctacgattgtgggagcgaact
agagagacaatcatcctggaggaagagcgagaaatgcaaagagaagcagaatatgaagag
agtgtggcaaaggagagtggacctgtggtgcccggagagcaagagggggaggcaggcttg
gccggaaagaagacaatcgaaactgttaaagctacggagcgcatcatggaagcgattgag
ctgtatcgggaagagacaacaaaattggaggagcacagagaagcttgcaaacgtgctgga
aaagagctgcctcctcctactaaccccatactgactgcatacggaaacatatcaccatct
cgatatgtcttggatgtcattcgaaaagtcaaatcaagtgagctagaagaatcactgctt
gtccttccattttcctacactcctgatctgctcactctgttcaatgagtacatccagcat
tctctagaagttgaactcatttgccgatgtctttttttcctgctcaggattcattttgga
cagatcactggtaatcagatgctcctaacagtaatggacagcttgagacaaaatacaatc
ggaaagatcaatgctatgagggatgtaatgggcttcaatttggcaggacttcagtttcta
cagagggagatagaagccaaagaagatgtgactttctttgctgatgcaaccgagcaattc
aatgagaagaagaggaaaagaaagaaacgggagagggttattctcactgttgtgtaa
DBGET
integrated database retrieval system