Callorhinchus milii (elephant shark): 103180191
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Entry
103180191 CDS
T03088
Symbol
impg2a
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cmk00536
]
103180191 (impg2a)
Glycosaminoglycan binding proteins [BR:
cmk00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
103180191 (impg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEA
UBQLN1
DUF4214
EGF
Motif
Other DBs
NCBI-GeneID:
103180191
NCBI-ProteinID:
XP_042189968
LinkDB
All DBs
Position
Unknown
AA seq
1638 aa
AA seq
DB search
MFGYRWNKAPLVVLFAFAFTLGSLTDTVLLESVLDETQHLKDFGSLSDHYIQSETGSNLK
QRHVIHRKIRSILLPSVIKLCAEETILQAINNHLKYYELRVCQEAVWEAFKIFWDRLPER
EEYEMWMNLCEKGTLTIFDIGANFSESEEHQRLIKQEFYKEPTMLVLVDLALMSNHTSYR
TGSCVLQRQLYLYPQKLPPQMEAASSPGSSTTTTLIKSNTTLKDTATNDPSSEMVPIAGI
DIAAEEEELAGTNEVEPVTVKSSKEVVEFSIQLVGENYREELANPSTLDHQKMVKDVRAE
MKNIFGKVPGFQSIHILEFREHQNLDSSSNVLVHYAMTFDGSILPIETIDTPSEVQGGLS
LEMENENRLPAVYTINDLRDFVAQASHEEKQIGDSLLTFDPETLQLLNEHSTDHGLGSND
FSLEDQEAPEVPSHASEDHTTVGLSTTGSPSADVNTVLNAERPSTPMTTNINDVFPGNFI
NGDFEVDNKQLNILFPKDIRNEGKLPNFMGSEQATESIISVVERLIITEGDTDGLLLNNA
VQPQSQPTVTELLSDHTSEEKMISMESSVTVTPREHSPEFSSDWEDVSEGTVFIPSSTMS
PTPLPFGTDPTITLDISEPSPHTVGSVSTDEQMAASSAIFTSTGPSIPSSPILVDSDGVY
HSGQMSQSTDASGFITHDPDVFDNLSSTTQQIFISSSTVDSDGNTEQSSDDQDIILDYGS
GSGIEPDFIWSWTTESSEPISYTQIQIKPQKTDFVQLTNITHDNIAIDHHTQLLNVAEIG
NVIEDFTELNADGVTSQEDASLLPEITSNRILDARLVSYISQALPEKVPVQWTPDNVLEL
TMQTSEATGVYDYYSSDSTSGVQPILDHSTSADLAEKYPVTLKPIKESSPKGQLIAEFTM
MGYPSTEAFTIQDLTLVSSLLDDSIESPTTKQLVTQSSITEQVNVNSLTADNGMTESPIT
DQMTMLSTGERIIIESPTHEHEVTEPVTVRNTATDISIVGQFITEPVIEHVVSKPSSLDQ
IIPESPTMWQLVTEFSDVEELMIEPHTIPQPVTGLSNSLWADTELTTVSLDKSISEPSNE
ILPITESSNEILPFHKSSSLPHTVVSNIIVAELTTPDFHSVTASAMVEPFTQTMYITDPS
TSEYDLSKLSNIVQSLSESAPVIDSVDESISATHPVMTLSTVVDLTTAASTTVKILAESS
PVDHHDLIVVEYSEMKPTKIHSSITQDIEENDDVHSEVQDISTELEHSDLIYHQEEADNH
DEMASGYTELAIAIPTNKAMMSNNTMSKRALIVFFSLRVTNMVFSDDLFNKSSPEYKALE
QQFLELLVPYLQLNLTGFKYLEILNFRNGSIVVNSRMKFAKPVPQSATNAVYLILEDFCN
TAYQTMNLAIDRYSLDVESGVQADPCKFQACNEFSECLVNQWTGEAECVCNPGYLSMDSL
PCQSICEIDTTFCLNDGKCDNIPHHGAICRCRVGENWWYRGEHCEEYVSEPLVVGIAIAS
VAGFLLVASAVIFFLAKTVREQIFKSDTRGSSGRSDSLASVENGTKYNPMYESDATTGYS
HYYRRYPHLSSYSSTSPEASTDFSSDEIRHIYEHSELSKEEIQDRLRIIDLYTKDRQFAE
FVRQHQMAMDNTRRSSTS
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttaccgatggaataaagcaccattggttgttctgtttgcctttgcattcact
ctcggttcactcacagatacagtccttctggagagcgttttagatgagacacaacacctc
aaagacttcggaagcctttctgatcactacattcagtctgagactgggagcaacttaaag
caaagacatgtgattcaccggaaaattcgatcaatattgctcccgagtgtaattaagcta
tgtgcagaggaaaccattctacaggccatcaacaaccacctcaagtattacgaactgaga
gtatgccaagaggcagtgtgggaagcgttcaagatcttctgggataggctacccgaacga
gaagaatatgagatgtggatgaacctgtgtgaaaaaggaactctaacaatttttgacatt
ggtgctaatttcagcgagtctgaggaacaccaaaggttgattaagcaggagttttacaaa
gagccaaccatgcttgtgctggtggatttggctctaatgtccaatcataccagctatcgt
actggttcttgtgtattacaaagacaactttatctttaccctcagaaattaccaccacag
atggaggctgcgagcagcccaggatcaagcacaacgacaactttgattaaaagcaacacc
accttaaaagatacagcaactaatgatccatcttctgaaatggttcccattgctggtatt
gacatcgcagctgaagaggaggagttggcaggcacgaatgaagttgaaccggttacagtg
aagtcgtcaaaggaggttgtagaattcagcatccagcttgttggagagaactacagagag
gaacttgctaatcctagcacattggatcatcagaagatggttaaagatgtccgtgcagag
atgaaaaatatctttggaaaggtaccaggatttcagagtattcacatactggaattcagg
gaacatcagaatttagacagcagcagcaatgtgctggtgcactatgcaatgaccttcgat
ggaagtattttacccattgagaccattgatactcccagtgaagtacaaggtggattgtcc
ttggaaatggaaaatgaaaaccgactcccagctgtttacacaattaacgatcttagggat
ttcgtagctcaggcctcgcatgaggaaaaacaaattggagattcattgctgacttttgac
ccagagactcttcagcttctgaatgagcattcaaccgatcacgggcttggcagtaatgac
tttagcctagaggatcaagaagctcctgaagtaccttctcatgcttctgaagaccataca
acagtgggactgtcaacaactggatctccttcagccgatgtgaacactgttctaaatgct
gagagaccatcaacgccaatgacaacaaatatcaatgatgtatttcctggcaattttatc
aatggagattttgaagtggataacaaacaattaaatattctttttccaaaagacatcagg
aatgaaggaaagctccccaacttcatgggaagtgagcaggctacggaatctatcatatct
gttgtggagagacttataatcacagagggtgacacagatggtttgctgcttaataatgca
gttcaaccacaatcacagccaacggtgactgaacttctatctgatcacacaagtgaagaa
aagatgataagcatggaaagctcagttactgttacaccaagagaacattctcctgaattc
tcttctgattgggaagatgtttctgaaggaaccgtgtttataccaagcagcaccatgtct
ccaacacctttaccatttggcacagatcctaccataactcttgatatcagtgaaccctca
ccccacactgtcgggtctgttagtacagatgaacaaatggctgcaagttctgcaatattt
acatcaacaggtccttcaatacccagttctccgatattagtagactcggatggagtttat
cattctggccaaatgtctcaaagtacagatgcttcaggctttataacacacgatccagat
gtttttgataatttgtcttcaactactcaacaaatctttatttcaagctcaactgtggat
tctgatggtaatacggaacaatctagtgatgaccaagacattattcttgactatggatct
ggatcaggaattgaaccagacttcatctggtcttggactacagaatcctctgaaccaatt
tcttatactcagatacaaataaagcctcaaaagactgattttgtgcagttgacaaatatc
actcatgataacattgctatagatcatcatacacaactgttgaatgttgcggaaataggc
aatgtgattgaagacttcactgagttaaatgcagatggggtgacatcccaggaagatgca
tctttattacctgaaataacgtccaacagaattttggatgcaagacttgtatcttatatt
tcacaagctttacctgaaaaagtccccgttcagtggacaccagataatgtattggaatta
actatgcaaacatcggaggcaacaggtgtgtatgattactattctagtgactcaacctca
ggagttcaacccatcttagatcactcaacctcagctgaccttgctgaaaagtaccctgtt
acattgaagccaatcaaggaatcatctcccaaaggccagctaatcgcagaattcaccatg
atggggtatccatcaacagaagcatttactatacaagatttgactcttgtttcatccctc
ctggatgactccatagagtcacccaccactaagcaactagtgacacagtcgtctatcacc
gagcaagtaaacgtaaattcactcacagctgataacggaatgactgagtcacctatcact
gaccaaatgacaatgttgtccacaggtgagcgtatcatcatagagtcacccacacatgag
catgaagtaacagagccagttactgtaagaaatacagccactgatatttccattgtcgga
cagtttatcactgagcctgtaatagaacatgtagtgtcaaaaccatccagtttagaccaa
ataatcccagaatcaccgaccatgtggcagctagtcacagagttttccgatgtggaagaa
ctgatgattgaaccacacaccattccacagccagttacaggattatctaactcgttgtgg
gcagatacagaactaactacggtgtctttggacaaatcaatttcagagccttcaaatgag
attctaccaatcacggaatcatccaatgaaattcttccttttcacaaatcgtcatctcta
ccacacactgtagtgtccaatattatcgttgctgaattgaccactccagactttcatagt
gtcaccgcttctgctatggtggaaccgtttactcaaacaatgtatattactgacccttcc
acttcagagtatgatctcagcaaattatccaacattgttcaaagcctcagtgaatctgca
cctgtcattgattctgtggatgaatccatcagcgcaacacatcctgttatgacattgtct
acagtagtagaccttaccaccgcagcatctaccacagtgaagatattggctgaatcatct
cctgttgaccaccatgatctcattgttgtagaatacagtgaaatgaaacccactaagata
cattcctcaatcactcaagacattgaggagaatgatgacgtacactctgaggttcaagat
atctcaactgagctggaacattcagatctaatttaccatcaggaagaggcagacaatcat
gatgaaatggctagtggctacacagaacttgcgattgccataccaacaaacaaagcaatg
atgagcaacaatactatgtccaagagggcactgattgtcttctttagtttgcgtgtgaca
aatatggttttctcagatgatctcttcaataaaagctcgcctgagtacaaggctctagaa
cagcaattcctggagctgcttgttccttacctacagttaaacctgactggttttaagtat
cttgaaatcttgaatttccgaaatgggagcattgtggtgaacagccggatgaagtttgct
aaacctgtgccacaaagtgcgaccaatgccgtctatctaatcctggaggacttctgcaat
acagcgtaccaaaccatgaatcttgctattgacagatactctctggatgtggagtcaggt
gtccaggctgatccttgcaaatttcaggcctgcaatgaattttcagagtgtctcgtgaac
caatggacaggggaagcagaatgtgtgtgtaatcctgggtatctgagtatggacagcctt
ccttgtcagagtatctgtgagatagacacaactttttgccttaatgatggtaaatgtgac
aacatcccacatcacggagcaatctgcaggtgtcgtgtgggggagaactggtggtataga
ggggaacactgtgaagagtatgtctcggagccactcgtggtgggcattgccatcgcctca
gtggctggtttccttttggtagcttccgcggtcattttcttcctggccaaaacggttcgg
gagcagatttttaaaagtgacaccaggggatcttcaggacgtagcgatagcctggcatca
gtggagaatggaacaaaatataatcctatgtatgaaagtgatgccacgactggatacagc
cactactacaggcgttaccctcatctgtcgtcctacagctcgaccagtcctgaggcatcc
actgacttcagcagtgatgagatccgacacatttatgagcacagtgaactcagcaaggag
gaaattcaagacagactgcggataatagatttatacactaaagatcggcaatttgcagag
tttgtgcggcagcatcaaatggctatggataacaccagaagaagttccaccagctaa
DBGET
integrated database retrieval system
