Callorhinchus milii (elephant shark): 103180424
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Entry
103180424 CDS
T03088
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04010
MAPK signaling pathway
cmk04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103180424 (cacna1ba)
04020 Calcium signaling pathway
103180424 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmk04040
]
103180424 (cacna1ba)
Ion channels [BR:
cmk04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
103180424 (cacna1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
103180424
NCBI-ProteinID:
XP_042193331
LinkDB
All DBs
Position
Unknown
AA seq
2361 aa
AA seq
DB search
MPRFAEEVPTPRYGGAGGPAGGGRGGSRQGVPQSSQRMYKQTMAQRARTMALYNPIPVRQ
SCFTLNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPM
SERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGTDF
DLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYM
GKFHKTCFSLDTGETVAEFPCGEDSARQCPDGSDCRGYWTGPNYGITNFDNILFAVLTVF
QCITMEGWVDILYNANDVLGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEN
RRAFLKLRRQQQIEQEFNRYLRWIHIAEEVMLAEEDKNAEDKSALDVGETQRDKGAVWIR
VLKRATTKKSKNDLIHAEEGDEHFTDISSVGFTRPSLKSVKNESSSYFRRKEKRFRFFTR
RMVKSQTFYWVVLCVVALNTLCVAIVHYDQPPWLTEALYFAEFVFLGLFLSEMFLKMFGL
GPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLRIFKVTKYWNSLR
NLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDGTPPTNFDTFPAAILTV
FQVLTGEDWNAVMYFGIESQGGVKKGMFSSVYFIILTLFGNYTLLNVFLAIAVDNLANAQ
ELTKDEEEMEEANIQKNTIQKAIEVADVSPISAANLSIATKDLQKSFKSMSVWEQRTSQI
RRQNLMNSQEALFNELNDEQRRVYASSHQIRPDMKTHLDRPLVVEPRNNLRNSMEKLRPS
EGQDYEQERLVQPESCEVPKRQHRHRDKAGEHEKEDGAVDNGDNGLSGKDEPRRVHKSRS
KESERDQEGRSKEGKSERSRSREGGKRHHHHHPQQQQPGPAEEAGEKECRRHRSHRPHAN
EQQPKEGNGTANGAKGERRGRGGDGTRSGNRDGEAAGRTESSEGAEKRRRHRQKALSTCE
AEGKRENGEKEGEPVPRERKNHKPKESQAPVDPVMLGTTALPPTGTVKHVPQQPEDADNQ
KNIKRVPTKEIDHTITVNIPVTITAPPGETTVLPVNNVDLESQTKKEEKKEMEEEDLTNK
GPRQILPYSSMFVFSPTNPVRRACHYIVNLRYFEMCILLVIAMSSIALAAEDPVLAVSPR
NDVLKYLDYVFTGVFTFEMVIKMIDLGLILHPGSYFRDLWNILDFIVVTGALVAFAFTAD
KGKDLNTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVI
AVQLFKGKFFYCTDESKEFEKDCRGQFLVYEKEVEAQPREWKKYDFHYDNVLWALLTLFT
VSTGEGWPTVLKHSVDATEENLGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQ
EQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQTFQYKMWRFVVSSPFEYFIMAM
IAINTVVLMMKFYNAPDPYDRMLHYLNILFTFLFSMECVLKLIAFGVLNYFRDAWNVFDF
VTVLGSITDILVTELADNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYV
CLLIAMLFFIYAIIGMQVFGNIALDDNRAINRHNNFRTFLQALMLLFRSATGEAWHEIML
ACLGHSPCDPRSGTDKAECGNDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSI
LGPHHLDEFIRVWAEYDPGACGRIHYKDMYSLLRVISPPLGLGKNCPHRVAYKRLVRMNM
PIAEDGSVHFTSTLVALIRTALDIKIAGGGAFQQQSDAELRKELTTVWPNLSQKMLDMLV
PPHKPTELTVGKVYAALMIFDYYKQNKSKRIQQQQQQQQVGDHRRMVGALTPSQEQPPSL
GNAKPVSRQPSRTSLNNGGNALIQGSGIKDSSTLPRTEEALSQSRMRIPELVQPDEGPID
PSHSQAVEMTELGHDLNQEDQPGLENHGRAASMPRLTAECQKSTRSSGNFLAPIPDTNPM
KRSVSTLTPQRAQTHSTHLRDYPLERVAPDQMPHHHHHHHRCHRRKDKKQRSLERSPSRH
GDGETVASPRDHSSRERDRERGRSQDRKPPSSTEKQRYYSCDRYGSRDPQQTKSTDHSRS
TSPSQGPDHSLHRQGSGSVNGSPLQSASGVSTPCRGRRQLPQTPQTPRPNITYKTANSSP
VQFTNLQGVLPPTPPGRMSRGRSEHNTMMRSESQTHPYVGSERGQWTVTRIGSDPYLGHH
DDYDSVGHALPGETLTFEAAVATNTGGTPRTSSYVSSFTSQPHQSRRVPNGFHYNLGVSA
GPGTGTRERKYYHETTQDEWC
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcttcgcagaagaggtgcccacccctcgctatgggggagctgggggtcctgcg
ggagggggtcggggtggcagccgacagggggtcccccaaagcagccaaaggatgtacaag
cagacgatggcccagagagcccgcactatggctctgtacaaccccatccctgtccgccag
agctgcttcacactcaacagatcactttttattttcagtgaagataatgtcatcaggaaa
tacgccaaaaggatcaccgaatggcctccatttgaatacatgattttagccactattatt
gcgaactgcattgtattagctttggaacaacacctaccagatggagacaaaacacccatg
tcagagcgattggacgacacggaaccttatttcattgggatattttgcttcgaagccggc
atcaaaatcattgctctgggattcgcttttcacaaaggttcctacctccggaatggctgg
aacgtgatggattttgtggtggtgttgacggggattttagccacggttggcacagacttt
gacctgaggaccttgcgggctgttcgggtattacgacctctgaaactggtgtcaggaatt
ccaagtttgcaggtcgtgctcaagtcaatcatgaaggcgatggtgccgttgcttcaaatt
gggcttctcctgttctttgccattgtaatgtttgccattattggcctggaattctacatg
ggaaaatttcataaaacctgcttcagcttggatacaggagagacggtggcagagtttcct
tgtggggaagactcggctcggcagtgcccggatgggtctgattgtcgaggatactggact
ggacccaactatgggattaccaactttgacaacatcctgtttgctgtgctgaccgtgttc
cagtgtatcacgatggagggctgggtggacattctgtacaatgcaaacgatgtcttgggg
aacacgtggaactggctttatttcatcccgctgattatcatcgggtctttcttcatgctg
aatctagtgctgggtgttttgtcaggtgagtttgcgaaagagcgcgaaagagtggaaaac
aggcgtgcgttcctgaagctacgacgacagcaacagatcgagcaagagttcaacagatac
cttcgctggatacatatagcagaggaggtcatgttagccgaagaggataagaatgcggaa
gacaaatctgctttggatgtaggggaaacccaacgagacaaaggagcagtgtggatccgt
gtcctaaagagagccacaaccaaaaagagcaaaaacgacctgatccatgcagaagagggc
gatgagcacttcacagacatctcctccgtggggtttaccagacccagccttaaaagtgtt
aagaacgagagctcttcctatttccggaggaaggagaagaggttccgcttctttacccgg
cgcatggtgaagtctcagaccttctattgggttgtcctgtgtgtggtggccctgaacacc
ctctgtgtggccattgtccactatgaccagccgccctggctcaccgaggctttgtatttc
gctgagtttgttttcttgggtctgtttctgtccgagatgtttctgaagatgttcggtcta
ggaccaaggaattacttccattcctcattcaactgctttgattttggggtgattgtgggc
agtatttttgaagtgatttgggctgcggtcaaacctggcacttcctttgggataagcgtt
ctccgagcccttcgcctgctgaggatcttcaaagtaaccaagtactggaactcgctgcgg
aatctggtggtctcgttgctaaactcgatgaaatcaatcatcagtttgctgttcctgctt
ttcctcttcattgtggtctttgctctgcttgggatgcaactctttggaggacagtttaat
tttgaagatgggactcctccgacaaatttcgatactttcccagccgcgatcctcactgta
ttccaggtcctgacgggtgaagactggaatgcagtgatgtatttcgggatagaatcccaa
ggaggcgtgaagaaaggaatgttttcatccgtttatttcatcatcttgacactgtttggt
aactacaccctactgaacgtcttcttggcaattgcagtggacaacctggcaaatgctcag
gaactgacaaaggacgaagaagagatggaagaggcaaacattcaaaaaaataccatccaa
aaggctatcgaagtggctgacgtcagccccatctcggcagctaacctctccatagcaacc
aaagatctgcagaagtcattcaagtccatgtctgtttgggaacaaaggacctctcagatc
agacggcagaacctcatgaacagtcaggaggcgttgtttaatgaactcaatgacgagcag
cgcagagtctacgcctcgtctcatcagatccggcccgatatgaagacccacctggaccgg
cctttggtggtggaacccaggaacaatctccggaacagcatggagaagctccgtccaagc
gaggggcaggactatgagcaggagagactggtgcagccagagagctgcgaggttcccaaa
cgccagcaccgtcaccgcgacaaggcaggggaacatgagaaggaagacggggctgtggac
aacggggacaatggactcagtggcaaggacgagccacggagggtgcacaagagcaggagc
aaagagagtgagcgagatcaggagggcaggagcaaggaggggaagagcgaacggagcagg
agccgagagggaggcaagagacatcatcaccaccacccgcagcagcagcagccgggtccg
gcggaggaggccggggagaaggaatgcaggcgccatcggtctcaccggcctcacgccaac
gagcagcagcccaaggagggcaacggcacggccaacggggccaagggcgagcggcgaggg
cgcggaggagacgggacccgctcggggaatcgagacggggaggcggctggcaggacagag
agctcggaaggggcggagaagcgacgcaggcaccggcaaaaggcgctgtccacctgcgag
gcggaggggaagagggagaacggggagaaggagggggagcctgttccgagggaacgcaag
aaccacaagccaaaagaaagccaggcccctgttgatccagtcatgttgggtaccactgcg
ttgccacctactggtactgtgaagcacgttccccaacagccagaggacgctgataaccag
aagaatatcaaacgagtccctacaaaagagatagatcacaccatcaccgtcaatatccca
gtcaccatcaccgctccccctggagagaccacagtgcttcccgtcaacaatgtagatctg
gaaagtcagacaaaaaaggaggaaaagaaagagatggaggaggaagacttgaccaacaaa
ggaccgagacagatcctgccttacagctccatgttcgtcttcagccctacaaaccctgtc
cgcagagcttgccactacatagtcaacctgagatacttcgagatgtgcatcctgttggtg
atagcgatgagcagcatcgcactggccgctgaagaccctgtgctggcggtgtcaccgagg
aacgatgtcctgaagtatctggattacgttttcacgggagtctttacgtttgagatggtg
ataaagatgattgatttagggctaatccttcatcccggctcctacttccgagatctttgg
aacatcctggatttcattgtggtcactggagccctggtcgccttcgctttcacggccgac
aagggaaaggacctcaacaccattaaatctctccgagtccttcgggtcttgcgcccactc
aaaaccatcaagcggttgcccaagttaaaggctgtctttgactgcgtggtgaactctctg
aagaacgttctgaacatcctcattgtttacatgctcttcatgttcatcttcgctgtcatt
gctgtccagctcttcaagggcaaattcttctactgcaccgatgagtcgaaggagtttgag
aaggactgcaggggtcagtttctggtgtatgagaaagaagttgaagctcagcccagagag
tggaagaagtatgattttcactacgacaatgtgttgtgggccttactgactctctttacg
gtatccactggagaggggtggccaaccgtcctgaagcactctgtggacgccacagaggag
aacctcggacccagccctggctaccgcatggagatgtctatattttacgtggtgtacttt
gtggtcttcccctttttctttgtgaacatctttgttgcgttgatcattatcaccttccag
gagcagggcgacaaagtcatgtccgagtgcagcctggagaaaaacgagagggcctgtatt
gatttcgctataagtgccaaaccactcactcgttacatgcctcaaaacaagcaaaccttt
cagtacaagatgtggcgatttgtggtctcttctcccttcgagtactttatcatggctatg
atcgcaatcaacaccgtggtgctgatgatgaagttttataacgctcccgacccgtatgac
aggatgttgcattacctcaacattctcttcacgtttctgttctccatggagtgtgtgctg
aaactaattgcctttggagttctgaattacttccgggatgcatggaatgtcttcgacttt
gtgactgttctgggaagtataaccgatatcttagtcactgagctggcggataatttcatc
aatctcagcttcttgcgactgttcagggctgcacgcctcatcaagctgctccgtcagggc
tacaccatacgtattctgctgtggacattcgtacagtcttttaaggcactgccgtatgtc
tgtctcctaattgccatgctgtttttcatctatgccattattggaatgcaggtgtttggg
aacatcgcactggatgacaacagagcgattaatcgacacaacaatttccgaaccttcttg
caagctcttatgctcttattcaggagtgccactggggaagcctggcatgagatcatgctg
gcctgcctgggccacagcccctgtgatccgcgctccggcacagacaaggctgaatgtgga
aacgattttgcctacttctactttgtctccttcattttcctgtgctcctttctgatgcta
aatctttttgtagctgtcattatggacaactttgagtatttgacgcgagactcatccata
ttgggacctcaccacctggatgagttcatacgggtctgggctgagtacgatcctggagcc
tgtggccgcattcattataaggatatgtacagtttgttgcgtgtaatctcaccgccactg
ggcttagggaagaactgcccacatagggtggcctataagcggctggtgagaatgaacatg
cccattgctgaggacggctcggtccacttcacgtcgacgctggtggcgttgatcaggacg
gctctggatattaaaatcgccggaggaggcgcattccagcagcagagcgacgcagagctc
aggaaagaattaaccacagtctggcccaacctgtctcaaaagatgctggacatgctggtg
cctccccacaagcctactgagctcacggtggggaaggtttatgccgctctgatgattttt
gattactacaagcagaacaaaagcaaacgaatacagcaacaacagcagcagcagcaggtt
ggtgaccacaggcgcatggtgggagccttgacaccatcacaagagcagccgccctccctg
ggcaatgccaagcccgtgtctcgtcagcccagcaggacctcgctcaacaacgggggcaac
gctctgatacagggcagtggaataaaagactcctccactttgccccgtaccgaagaggca
ttgagtcagtccagaatgcgaatccctgagttggttcaaccagatgaaggaccgattgat
ccaagtcattctcaggctgtggagatgacggaattgggacacgacctcaaccaggaggat
cagccaggcctggagaatcatggccgagcagcctccatgccccggctcaccgcagagtgc
cagaaatcaacgcgatcgtcggggaatttccttgcacctataccggacaccaaccccatg
aagcggtcagtgtccacgctgacaccgcagcgggctcagacccacagcacccacctccgc
gactacccgctcgagcgagtggcaccagatcagatgcctcaccatcaccaccatcaccac
cgctgccatcggaggaaggacaaaaagcaacgctccctggagcggtcgcccagcaggcat
ggagacggagagacagtggcttctccaagagatcattcctcgagggagcgggaccgagaa
cgtggcaggtcgcaggacaggaagcccccgtcctccacggagaagcagcgctattattcc
tgcgaccgctatgggagccgggacccccagcagaccaagtcgaccgatcacagccggtcc
acgtctcccagtcaaggccccgaccatagtctccacagacagggcagtggttcggttaat
ggcagccctttgcagtcagcctctggcgttagcaccccgtgtcgtggtcgaaggcagctt
ccccagacacctcaaacaccgcgacccaacatcacctacaaaactgcaaactcttctccc
gtccaattcaccaacctccaaggggtcttacctccaactcccccagggcgaatgagtcgg
ggaaggtcagagcacaacactatgatgcgtagcgagtcccagacccacccttatgtcggg
agcgagcgcgggcaatggacggtgactcgtatcggctctgacccttacttaggacaccac
gatgattacgatagcgtggggcacgcattgccgggagagacacttaccttcgaggcagcc
gtggctaccaacacaggaggaacccccaggacttcttcctacgtctcatccttcacatct
caacctcaccaaagccgcagggtcccgaacggtttccattacaacctgggagtgagcgcg
ggtcctgggacaggcacaagggaacggaaatactaccacgaaacgacccaagatgaatgg
tgctag
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integrated database retrieval system
