Callorhinchus milii (elephant shark): 103180436
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Entry
103180436 CDS
T03088
Symbol
clasp1a
Name
(RefSeq) LOW QUALITY PROTEIN: CLIP-associating protein 1a
KO
K16578
CLIP-associating protein 1/2
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmk03036
]
103180436 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cmk04812
]
103180436 (clasp1a)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
103180436 (clasp1a)
Cytoskeleton proteins [BR:
cmk04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
103180436 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
HEAT_2
Cnd1
Sec7-like_HUS
Adaptin_N
PDS5
HEAT_DAAF5
RTP1_C1
UTP20
MMS19_N
ParcG
TAN
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
103180436
NCBI-ProteinID:
XP_042192411
LinkDB
All DBs
Position
Unknown
AA seq
1480 aa
AA seq
DB search
MEPNLEYYLAQVLQKDMGRRLQIAQDLIEYINDRQKSIELEQDQGMLDRMVDGLATGWVN
ASNFKVALFGIEIFSALVSRLQDRFKSQIGTALPSLIDRLGDAKDQVREQDQSLLLKIME
QAATPQYVWERILGGFKHKNFRSREGVCLCLIATLNSHGAHSLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRTDLHKKGLPQSRLNVIFAKFDDVQKSGNMILSSTDKN
FDDEDSVDGNRPSSASSASSKVLTSRRPVGVATGRRLAGVGSKSTSVNTAAGAVDEDDFI
RGFEEVPIVQIYSNRDLEESINKIREILSDDKHDWEQRVTALKKIRSLIMGGAAEYESFF
QHLRLLDGALKLSAKDLRSQVVREACLTLGYLSSVLGXRFDHGAESIMPTLFNLVPNSAK
IMATSGVATIRLIIRNTHFPRLIPIISSNCASKSVAVRRRSFEFLDRLLQEWQTHSLEKH
VGLLAETIKKGIHDADSEARVEARKVYWDFHGHFSREADILFNSLEPSYQKALQSHLKNS
DSIVSLPQSDRSSSSSQESLNRPLSTKRSPTGGSSVSRASAVSAKPVSIPGALQRSRSDI
DVNAAANAKSRLTATPSNTPGHFSSAAALPPGSYASLGVSAKKDGRVRSRRQSAGSTTSI
ASTPADTRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSTYSGMSTGAQRVAVVQP
SSEKRSKIPRSQGCSREASPNRLGLDRYGLGQAGRLPASVNAMRVLNTSTEVEAAVADAL
LLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVAEV
LNHCASSNWSERKEGLVGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLET
LVDFIIIHKEDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPFDQQFNILM
RFIVDQTQTPNLKVKVAILKYIERLARQMDPVDFVNSSETRLAVSRIITWTTEPKSSDVR
KAAQIVLISLFELNTPEFSMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTMGRTP
SRHSSSRTSPLTSPTNCSHGGLSPSMLDYDTENLNSDEIYSSLRGVTEAIQNFSFRSQED
LNEPIKREGKKDSDNVSRDGGIASPSSDIRGGGEPMEGGRTALDNKTSLLNTPPPRCFSG
PRTRDYNPYNYSDTINAFDKTALKEAMFDDDMEQFRDVPIDHSDLVADLLKELSNHNERV
EERKGALLDLLKITREDTLGVWDEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQP
ARFKNYAELTIMKTLEAHKDSHKEVLRAAEEAAATLASSIHPEQCIKVLCPIIQTADYPI
NLAAIKMQTKVIERITKESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEE
LKPYLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaacctggaatattacttggcgcaagtgcttcagaaggatatgggacgtcgg
ctgcaaattgctcaagacctaatcgagtatatcaatgatcgtcagaaatccatcgaattg
gaacaggaccagggaatgcttgatcgaatggttgatggccttgctacaggatgggtcaac
gccagtaactttaaggttgccttgtttggcattgagattttctctgccctggtctcgcgt
cttcaggatcgttttaaatcgcagattggcacagccctacccagcttgatagaccgacta
ggagatgcaaaggatcaagtacgagaacaggatcaaagtctgctgctaaagatcatggaa
caggcagccactccacagtatgtttgggagcgaatattgggaggattcaaacacaagaat
tttcgatccagagaaggggtttgtctttgccttattgcaacgttaaatagtcatggagcc
cacagtttaaccctaagcaaaattgtaccccacatctgtaacttattaggagatccaaac
agtcaggtccgagatgcagcaataaatagcttagtagaaatatacagacatgtaggagaa
cgagtccgaacagatcttcataaaaaggggctcccacaatcacggttgaatgtaattttt
gcaaaatttgatgatgtccagaaatctggaaacatgatactgagttcaactgataaaaat
tttgacgatgaggattctgtggacggtaaccgaccttcttctgccagttctgcatcttcg
aaagttctcacctcccgacgtcccgttggtgtggctaccggtcgtagattagctggggtt
gggtccaagagcacatcagtaaacacagctgctggtgctgttgatgaggatgatttcatt
cgtggattcgaagaagttccaatagtgcagatttattccaacagagatctcgaagaatcc
atcaataaaattcgagaaattttatcagatgataaacatgactgggaacagcgagtaact
gctctgaaaaagataagatctctaatcatgggcggagctgccgagtacgaatctttcttt
caacatctgcgtcttttagatggagcattaaaattatcagcaaaagatctgcgatctcaa
gttgtgcgggaggcttgtctcacattgggatatctctcatctgttctggganatcgcttt
gatcacggagcagaatccattatgccaacattattcaatcttgttcctaatagtgccaaa
atcatggccacatctggcgtagcaactatcagattaatcattcgaaatacccacttccct
cgattaatacccatcatctcaagcaactgtgcatcaaagtcagtggctgttcggagacgt
tcttttgaatttttggatcgattactacaagaatggcaaacgcacagcctagaaaaacat
gtaggtcttctcgcagaaactataaagaagggtatccatgacgcagactcggaggcaagg
gtagaagctcgaaaagtatactgggatttccacggccacttcagtagggaagctgacatc
ttatttaattcattggagccttcctaccagaaagccttgcagtctcacctgaaaaattca
gacagcattgtttccttgccacaatcagatcgctcgtcatccagttcacaagagagttta
aaccgccctctgtctacaaagcgaagtccaactgggggaagctcagtatctcgagcttcc
gcagtgagtgcaaaaccggtctccatcccgggggccctgcagcgttctcgcagtgatatt
gacgtgaatgcagccgctaatgccaagtctcgtttgaccgccactccaagcaatacacct
gggcacttcagctcagctgcagctctacctccaggatcgtatgcatccttaggggtttct
gcaaagaaggatggtcgtgtgcgctctagacggcagagcgctgggagcaccaccagtata
gccagcacacccgctgacaccagaggcaggagccgagctaaagtagtatctcagtcacag
cgatccagatcagctaatccagcaggcgctggcagtagatcgagctcccctggcaagcta
ttgggtagcacgtactccggcatgagcacaggagcacagcgggtcgcagtagtacaacca
tcgtctgagaaacgcagtaagatcccacgcagtcaaggatgcagtagggaagccagcccc
aacaggttggggttagatcgctatgggctgggacaagcgggtcgtttgcctgcctcggta
aacgccatgagggttctcaacacgagcacagaggtagaggctgctgtggcagatgcactg
ctgttgggagactccaggagtaagaaaaagcctgtgaggaggaggtacgagccgtatgga
atgtactctgatgatgacgcaaacagtgacgcctccagcgcttgttcagagcggtcctac
ggttccagaaacggaggcatcccacattatctacgtcagacagaggacgtggcggaggtg
ttaaaccattgcgccagctcaaattggtctgagcggaaggaggggctcgttggccttcaa
aacctgcttaaaagtcagaggacattaagccgtgttgaactgaagcgattgtgtgagata
ttcactcgaatgtttgcggatcctcatagcaagagagtattcagcatgtttctggagacg
ttggtagatttcataatcatccataaggaagatcttcaggactggctgtttgtactgctg
actcagctgttgaagaagatgggagcagatctgttaggttctgtacaggccaaggttcag
aaagcactggacgtcaccagagagtcctttccatttgatcaacagttcaacattcttatg
cgctttattgtcgatcaaacacaaacacctaacctcaaggttaaagttgcgatcttgaag
tatattgagaggctggccagacagatggacccagtggactttgttaactccagtgagacc
cgtcttgctgtttcccgaatcataacctggacaacagaaccaaagagctctgatgtgaga
aaggctgcacagatcgtactgatttctctgtttgagctgaacacccctgaattcagcatg
ttacttggtgccttgccaaaaacattccaagacggtgccaccaagctcctacacaaccac
ttgaagaactccagcaacaccagcgtgggatcacccagtaatacaatgggacgcacgcct
tcacgacactctagcagccgaacaagcccccttacatctccgaccaactgttcccatgga
gggctctccccaagcatgctggactatgacacagagaacctgaactccgatgaaatctat
agctctcttcgcggagtgacggaagccattcaaaacttcagtttccgcagccaagaggat
ttgaacgaacccatcaaaagggaggggaagaaagacagtgacaatgtctctcgcgatgga
ggaattgcgtccccatcctctgacattcgtggaggaggggaacctatggagggcgggaga
acagctctcgacaacaaaacctctttgcttaacactcctcccccgcggtgtttctctggg
cctcggactcgggattacaatccatataactattcagatactatcaacgcttttgacaag
actgcgctcaaagaagccatgtttgatgatgatatggaacagttccgtgatgttcccatc
gaccactctgatctggttgctgacctcctgaaagaactgtcgaatcacaatgagcgagtg
gaggaacggaagggagcattactggacctcctaaagatcaccagggaggacacacttggg
gtgtgggatgagcacttcaaaactattctgcttcttctcctggagaccttaggagacaag
gatcactcaattagagcactcgccttaagagttttacgggaaatcctacggaaccagcca
gcgaggtttaaaaactacgcagaactaaccatcatgaaaacgctggaagcgcacaaagac
tcccacaaagaggtgctaagggctgcagaagaggctgctgctacattggcaagttccata
catcccgaacagtgcatcaaagtgctctgccccattatccagacagctgactaccccatc
aacctcgctgccattaagatgcaaaccaaggtgatcgagaggatcaccaaggagtccctt
caccagcttcttccagacatcatcccagggttgcttcaggggtatgacaacactgaaagc
agtgtgcgtaaagcgagcgtattttgcctggtggcaatttattctgtaatcggagaagag
ctaaaaccttaccttgcacagctcaccggaagtaaaatgaaattactaaacttgtacata
aaaagggcccagactacaaacagcaacagtagctcatcgtcagacgtatcgagccacagc
taa
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integrated database retrieval system
