Callorhinchus milii (elephant shark): 103180520
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Entry
103180520 CDS
T03088
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmk03009
]
103180520 (nsun5)
Enzymes [BR:
cmk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
103180520 (nsun5)
Ribosome biogenesis [BR:
cmk03009
]
Eukaryotic type
Other ribosome biogenesis factors
103180520 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NSUN5_N
NSUN5_fdxn-like
Methyltr_RsmB-F
FtsJ
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
103180520
NCBI-ProteinID:
XP_042194837
UniProt:
V9KL31
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MALYVKAAEIVERVESKRGSVKDLVYNSGHQNIKQLFALVCETLKYAGILKEIIGSTKLL
KQEKKLQLSVAKVLVYDLLFGKGVKCGGNWKAIITKHRSQLKSALARLKVKRKVSRNEDL
IVSKASGSQGCRVPRYVRVNLLKTSTNDVIDYFRRDGFIYRGRATSVNDLKHLKGKEFIC
DLHLPELLVFPSTIDLHQHFLYTAGHIILQDKASCLPAHLLNPPQGSHVIDACAAPGNKT
SHLAAILRNKGKLFAFDLDIQRLATMGTLLLRAGVTCHQLANEDFLLVASSDPKYQDVRH
LLLDPSCSGSGIVSRLKQVTEDEESASPERLQALSSFQRKALCHALSFPRVQRVVYSTCS
VHQEENEEVVREVLQQHRDSFRLVNLMPSWPYRGLDTFPEGSLCLRASPDQTLTNGFFVA
MFERWSGEKTTEQTKSPSQAKASLSAVDTVGMDGNSEASPSTAPTVKRKRKKKKKKLQPS
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtacgtgaaggcggctgagatcgtggagcgggtggagagcaaacgcggctct
gtcaaggacctggtgtacaacagcggccatcagaacattaagcagctttttgcactggtt
tgcgaaaccctgaagtacgccggcattctgaaggaaatcatcggctccaccaaactgctg
aagcaggagaagaagctgcagcttagcgtcgccaaggtgctggtgtacgacctgctcttc
gggaagggcgtgaagtgcgggggcaactggaaagcgatcatcaccaaacatcgctcgcag
ctcaagtcggcgcttgcccggctgaaggtcaaaaggaaagtcagccgcaatgaggacctc
atcgtgagcaaagcatccggcagccaaggttgccgggtgcctcgctacgtcagggtgaac
ctgctgaaaaccagcaccaacgatgtgatcgactacttcagacgggatggttttatttac
cgcggtcgagcgaccagtgtgaatgacctcaaacacctgaagggaaaagagtttatctgt
gacctccacctgccagagttactggtgtttccttcgaccatagacctgcaccaacacttc
ctatacacggcaggccatatcattctccaggacaaggccagttgcctcccggcacatctt
ctcaaccccccgcaagggtcgcacgtaatcgatgcctgtgcagctccagggaacaagaca
agtcacctcgctgctattctccgtaacaaagggaagctctttgcctttgacctggacatc
cagcgtttggccacgatgggcacgttgctgctccgggccggagtcacctgccaccagcta
gccaacgaggacttcctactggtggcttccagcgaccccaagtaccaggatgtcaggcac
ttactgctggacccctcgtgcagcggttctggaatcgtcagccgcctgaagcaggtgact
gaggatgaggagtccgcctcgccagagcgtttgcaggcgctgtccagcttccagcgcaaa
gccctgtgtcacgctctcagcttcccccgggtgcagcgcgtggtctactccacctgctcg
gtccatcaggaggagaacgaggaggtggtgcgggaggtgctgcagcagcacagggacagc
ttcagactggtgaatttgatgccctcctggccataccgtggtctggacacattccccgaa
ggctccctgtgtctcagggcctctccagaccagactttgaccaatggtttttttgtggcc
atgtttgagaggtggagcggagagaagacaacagaacagaccaagagtccctctcaggct
aaggcatcactgtctgcggttgacacggtcggaatggatggaaactctgaggcttcccca
tctacagctccaaccgtcaagaggaaacggaagaagaaaaagaagaagctgcaaccatca
gcttag
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integrated database retrieval system
