Callorhinchus milii (elephant shark): 103180547
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Entry
103180547 CDS
T03088
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmk03021
]
103180547 (btaf1)
Transcription machinery [BR:
cmk03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
103180547 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_2
TOR1L1_N
TPR_Trm732_C
UTP20
HEAT_EZ
ARM_ECM29
Arm
Motif
Other DBs
NCBI-GeneID:
103180547
NCBI-ProteinID:
XP_007894671
LinkDB
All DBs
Position
Unknown
AA seq
1862 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELHNLLSKVLTYLRSPNWDTRI
AAGQAVEAIVKNVPEWNPTPKQEPGSETQMEEASSDRLSFTRFDISRLLKHGASLLGSAG
VEFEIQHEKSGEVDPKERIAHQRKLLQKKLGLDMGAALGMNTEELFNDEDLIYNPPPAPP
VIKQPVGRTTGCLTSRNHALVQAADLIEAEFQPGMSSRQKNKAKRMAKLFAKQRSRDTVE
GNANNEKCNDNIDGEPEEKRRKLTNVVIDQSATESKVLVDNVPHNSSLFDESNEWPLESL
CEELCNDLFNPSWEIRHGAGTGLREILKAHGKSGGKMGDSTLEEIEQQHQEWLEDLAIRL
LCVFALDRFGDFVSDEVVAPVRETCAQTLGVVLKYMNEVRVHGTVDVLLKLLEQEQWEVR
HGGLLGIKYALAIRQDLIETLLPKVLPAIIEGLQDLDDDVRAVAAAALVPVVESLVDLKA
SEVPFIINTLWNALLDLDDLTASTNSIMTLLSSLLTYRQVQQHSIQQSLTVLVPRVWPFL
RHTISSVRKAALETLFTLLSTQDESCVTWLTPILQDMLRHIYQSCILESSHEILELIQKV
WLELLKKAPVQYVVAAACPWMGAWLCLMMQPSLMPIDSNMLLEVKAKSKDKSCSKQRQWQ
APTKEVTQESIAGSDTINEDQATRDYVVTRTRLMAAKLLGALCCSMCDSTVNSTIQEVKP
AESLAQLLLFHLNSKSALQRIAVALVISEWAVLQKDCSIVSNAAQPRLMAILSEHLYYDE
IAIPFTRMQNECKQLITSLADANCDVGNRVNNNVLTIDQANELVTTIFNEVTSNCSLMPN
VLQLLDGKRQQVQMTVAETNQEWQTLHLRVHMFAACAVINLQQLPEKLNPVIKPLMEAAK
KEENILVQNYAASSIAKLLQQCTSRCPCPNPKIVKNLCNSVCVDSTVTPSAISPVALPNS
LENSKGPNSEKDGMHHTVNKTRGIITLYRHQQAAFALTSRRGPTPKALKGSSADMSQGIA
GINLCEHDEAQKPNLIQRRGAEYALTTIGKHFGAEMATSLPYLWDSMVGPLKNHIDVQNF
NGNLVLEKGDVAAQDLVNSLQVLEITAAAMASDIHAQLLEHLPHLCTCLRHPYTAVRHVA
ARCVGVMSKMATMETVSIFLEKVLPWLGAIDDNAKQEGAIEALACMMEQLDVDIVPYIVL
LVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSEELIRQKARERHFLEQ
LLDGRKLENYKIPVPIQAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILA
GDHYHRTQDYVKNQAENCFPLPSLVVCPPTLTGHWVDEVGKFCAKEFLNPLHYTGPPTER
ARLQHLIKKHNLVVASYDVVRNDIDFFKNIKWNYCILDEGHVIKNGKTKLSKAVKQLTAN
YRLILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGV
LAMEALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCVLSSLQVQLYEDFAKSRAKCDVDE
TISTGTVTEENEKPKLKATGHVFQALQYLRKLCNHPALVLTSQHPEFQHISEQLAAQGSS
LHDIQHAPKLSALKQLLLDCGLGNSGTSESGTESVVAQHRILIFCQLKSMLDIVEHDLLK
PQMPSVTYLRLDGSVPAGQRHSIVARFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEH
DWNPMRDLQAMDRAHRIGQKRVVNVYRLITKGTLEEKIMGLQKFKMNIANTVISQENASL
QSMGTDQLLDLFTLDKESHEDRGSCSTEKSSMKAMLENLGELWDQQQYDTEYDLDTFMHS
LK
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtcgagacttgaccgtctctttattttactggacaccggcaccacaccagta
actagaaaagcagcagctcaacagttgggtgaagtagttaagttacatcctcatgaattg
cacaacctgttatccaaagtgttaacatatttacgtagtcctaattgggatacgcgcatt
gcagctggtcaagcagtagaagctatcgtgaagaatgtgccagaatggaaccctactcca
aagcaagagcctggttcagaaactcaaatggaagaagcgtcttcagatcgtttgagcttt
acccggtttgatatttcacgtctcttgaaacatggagcatctcttcttggttctgctggt
gtagagtttgagattcaacatgagaaatcaggagaagttgacccaaaggagagaatagcg
catcagagaaaactgttgcagaagaagttgggtcttgatatgggagcagctctaggaatg
aacacggaggagctctttaatgatgaagatctcatttataatcctcctccagctccacca
gtaataaaacaacctgtaggtagaaccacaggctgtttgacttcaaggaatcatgcactt
gtgcaagctgctgacctgattgaagctgaatttcagccaggtatgagtagtcggcagaaa
aataaagcaaagagaatggctaaattgttcgctaagcaacgatccagagatacagtggaa
ggaaatgcaaacaatgaaaaatgcaatgataatattgatggggagcctgaggaaaagcgt
aggaaacttacaaatgttgtaattgatcagtcagcaactgaatcaaaggtgttggtggat
aatgtaccacacaactcttcattgtttgatgagtcaaatgaatggcctttggaaagcctt
tgtgaagaactttgtaatgaccttttcaacccttcatgggagattcgtcatggtgcagga
acagggttgagagagattctgaaagctcatgggaagagtggaggtaaaatgggagacagc
actctggaagagattgaacagcagcatcaggaatggttagaagacttggcgatccgtcta
ctttgtgtatttgcacttgacagatttggagattttgtgtctgatgaggttgttgcacct
gtgcgggagacttgtgctcaaactcttggagttgtgttaaagtacatgaatgaggtgaga
gtgcatggaactgttgatgtgcttctaaaactgctggaacaggaacagtgggaagtgaga
catggtggacttctaggaataaaatatgctttggcaattcgtcaagacctaattgagaca
ttgttaccaaaagtacttcctgctataatcgaaggcttacaggacttggatgatgatgtt
cgagcagtagcagcagctgcgctcgtaccagttgtggaaagtctagtagatctgaaagca
tctgaggtaccatttattatcaatacgttatggaatgcccttttggacttagatgatctt
acagcttctacgaatagcattatgactttattgtcatccttattgacatatcggcaagtt
caacagcacagtatccagcaatcgctcactgttttggttccccgtgtttggccatttttg
cgtcatactatttcttctgttcgtaaagcagctttggaaacattattcactcttctgtct
acacaagatgagagctgtgtgacatggttgactccaattttgcaagatatgctacgacat
atctatcaatcctgtattttggaaagcagtcatgaaattttggaacttattcaaaaggtg
tggctggagttgctgaaaaaggcccctgtccagtatgtggtggccgctgcttgtccttgg
atgggggcttggctttgcttaatgatgcaaccttctcttatgccaattgattcaaacatg
ctgctagaggtcaaagccaaatcaaaggataaatcttgcagtaaacagcgacaatggcaa
gctccaacaaaagaagtaacacaggagtctattgctggttcagataccatcaatgaggac
caagcaaccagagattatgttgtaactcgaacacgtcttatggcagccaagttacttgga
gccctctgctgttctatgtgtgattctactgttaattctaccatccaggaagtaaaacca
gctgaatccctagcccagcttttgctgttccatttaaattcaaaatctgctttgcagaga
attgctgtggcgttagttatttctgaatgggctgtattgcaaaaggattgcagcattgtg
tccaatgcagcacagccgcgattgatggcaattttatcagaacatctttattatgatgag
atagccattccattcacacgaatgcagaatgaatgcaaacagctgataacatcattggct
gatgcaaactgtgatgttggaaaccgagtgaataataatgtgcttacaatagaccaagca
aatgaattggtcacaactatattcaatgaagtaacctcaaattgtagtttgatgcccaac
gtgctgcagctgttggatggtaaacgacagcaggtccagatgactgtagcagagaccaat
caagaatggcaaactcttcatctcagggttcacatgtttgctgcctgtgcagttattaat
ttgcagcaacttccagaaaaactgaatccagttataaaacccttaatggaagcagcaaag
aaagaagaaaacatacttgtccagaattatgcagcctcttccattgccaagctcttacag
cagtgcacatccagatgtccttgccctaatcccaaaatagtgaaaaacctttgtaactct
gtgtgtgtggactctacagtcactccttcagcaatctctccagtagccttgcccaacagt
ctggaaaactctaaaggaccaaattccgaaaaagatggaatgcaccacactgtaaataag
actaggggaattattacactttacaggcatcagcaagctgcctttgctttaaccagcagg
cgagggccaactcccaaagcactcaaaggatcatctgcagatatgtctcagggaattgca
gggattaacttgtgtgaacatgatgaggcccagaagccgaacttgattcagaggagagga
gctgaatatgcacttactaccataggaaaacattttggtgctgaaatggccacatcattg
ccatatctctgggattctatggttggaccattgaagaatcatatcgatgtacagaatttc
aatggaaatcttgtccttgagaaaggagatgttgctgctcaagatttagtaaattcattg
caggtgttagaaattactgcagcagcaatggcttctgatatccatgcccagctgttggaa
catcttcctcatctttgcacatgtttacggcacccgtacactgcagtcaggcatgtggcg
gctagatgcgtgggtgtcatgagcaaaatggctactatggaaactgtgagcattttcctg
gagaaagttcttccatggctaggagcaattgatgataatgcaaaacaggaaggagcgatc
gaagcattggcatgtatgatggagcagcttgatgtagacattgtcccatacattgtcctc
ttggtggtgcctgtgctgggcaggatgagtgaccaaacggacagtgtcaggttcatggct
acccagtgctttgcaacccttatcagattaatgccacttgaagctggtattccagatcca
ccaaatatgtcagaagaattaatcagacaaaaagcaagagaacgtcatttcttggaacag
ttgttggatgggaggaaattggaaaactacaaaattcctgttcctatccaagctgaactc
agaaaataccaacaggatggtgtaaattggttggcattccttaacaaatacaagcttcat
ggcattctttgtgatgatatgggtttgggaaagactttacaatctatatgcattcttgca
ggagatcattaccacaggactcaggattatgtaaaaaatcaagcagaaaattgctttcct
ctcccttctttagttgtgtgtcctccaacactgacaggacattgggtagatgaagttggg
aaattctgcgctaaagaatttttgaatcctttgcactatacggggccccctactgaaagg
gcaaggttacagcaccttataaaaaaacacaatcttgttgtagcatcatatgatgttgta
cggaatgacattgactttttcaaaaatattaaatggaactattgtattcttgatgaaggc
cacgtcatcaagaatggcaagacaaaactatcgaaagcagttaagcagctaactgcaaac
tacaggttgattctgtctggtacaccaatacagaataacgtcttggaactatggtcattg
tttgacttcctgatgccaggattcttgggtactgagcgacaatttgcagctcgttatgga
aagcccatattagctagcagagatgccaggagttcttcacgggagcaagaggcgggtgtt
cttgcaatggaagcattacatcgacaggtacttccattcctgttacgcagaatgaaggaa
gatgttcttcaagatcttccacccaagataattcaagattattactgtgttctcagtagt
ttacaggtacaactttatgaagattttgccaaatctcgtgctaagtgcgatgttgacgaa
accatatccacaggtacagtcactgaggaaaatgaaaaacccaaactgaaggctacaggg
catgtattccaggctttacagtacctgagaaaactatgcaatcatccagcactcgtgcta
acatcacagcatccagaattccaacatatttcagagcaacttgctgctcaaggttcatct
cttcatgatattcaacatgctccaaagctctctgctttaaaacagctactgcttgactgt
ggacttggcaatagtggcacttcagaaagtggtactgagtctgttgtagcacaacatcgc
attctcatattctgtcagctgaagagtatgttggatattgtagaacatgatttgctcaaa
ccgcaaatgccaagcgttacttacttaagactggatggcagtgtacctgcaggccagaga
cattccattgtggcaaggtttaataatgacccgtctatagatgtcttgctgctaacgact
cacgttggtggcctaggtctcaatcttactggggcagatacagtagtgttcgtggagcat
gactggaacccaatgcgtgatctgcaggcaatggatcgagcacatcgcattggacagaaa
cgtgtggttaatgtttaccgattaataacaaaaggaaccttggaggaaaaaatcatggga
ttacagaaattcaagatgaatattgcaaatacagtgattagccaagagaatgcaagtctt
cagagcatggggacagatcagcttctggatcttttcactcttgataaggagagccacgaa
gaccggggatcttgttccactgaaaagtcatctatgaaggcaatgctggaaaatcttgga
gaactttgggatcagcaacaatatgacacagaatatgacttggatacatttatgcattct
ctgaagtaa
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integrated database retrieval system
