Callorhinchus milii (elephant shark): 103180663
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Entry
103180663 CDS
T03088
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmk03021
]
103180663 (supt6h)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103180663 (supt6h)
Transcription machinery [BR:
cmk03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
103180663 (supt6h)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
103180663 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Spt6_S1
Tex_central_region
S1
HHH_3
HHH_9
S1_RRP5
Tex_YqgF
SH2
Tex_N
DUF6656
Motif
Other DBs
NCBI-GeneID:
103180663
NCBI-ProteinID:
XP_042194334
UniProt:
A0A4W3JZG3
LinkDB
All DBs
Position
Unknown
AA seq
1718 aa
AA seq
DB search
MSDFVESEAEESEEEYNEEGTVVPKKPKKFIEDDDEEEEEDNADDQDEQGNLKDFINDEL
DEDEEDDDEAGSDASGTSDSIAKKRKRKAYDDRLEDDDFDLIEENLGVKVKRQKFRRVKK
VSDDEDEEEEEHSKKGHEKEAIADELFPEFDGEEREQVEAPVIPPEEEEEEEEEESDIDD
FIVDDDGQPLKKPKWKRKFPGYTDAALQEAQEIFGVDFDYDEFDKYNEYDEELEDDYEYE
DEELGEGETRARPKKTAKKRVSRRSIFEIYEPSELESSHLTDQDNEIRVTDMPERFQLRG
IPVKPAEDDELEEEAEWIYRNAFSTPSISLQESSDYLERGQGVSNFSRKGPSTIQKIKEA
LNFMRNQHFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKNRKENLTRLFQKMQA
YQYEQISADPDKPLADGVRALDTTDVERLKDVQSIDELRDVYNHFLLYYGRDIPKMQNAS
KVTKKKYKKNQQGREDEEEGERDEVEEEERLPTELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFSSPENVLEGSRYMVAMQIAREP
LVKQVVRQTFQERAKINIMPTKKGKKDIDEAHYAYSFKYIKNKPVKELRDDQFLKMCLAE
DEGLFTLDICIDMKGLEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNKQRSMAIERALNQF
LYPQMAKELKNKLLIEARDYLCKACSRKLYNWLKVAPYRPDQQNEEDDDDFMEENQSKGV
RVLGLAFSGERDTPVFCSLVNGDGEVTDFLRLPYFLKRRNAWREEERERKAHDIETLKKF
LLNKKPHVVAVGGENRDALMVIEDIKRVVNELEQEHQMSPIGVQMVDNELAMLYMNSKKS
ENDFRDYPPLLRQAVSLARRVQDPLVEFAQVCSSDEDIMCLKFHPLQDQVIKEELFNALY
CEFINRVNEVGVDVNRAITHPHTQALVQYVCGLGPRKGSHLQKILKQNNTRLENRTQLVT
MCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDES
AEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRV
PCRSPNPEEIFNMLTKETPETFYIGKLITCNVTGIAHRRPQGESYDQAIRNDETGLWQCP
FCQQDNFPELSEVWNHFDSGACPGQAIGVKTRLDNNVAGFIPTKFLSDKNVKHPEERVKI
GMTVHCRIMKIDIEKFSVDLTCRTSDLMDKNNEWKLVKDTYYDFDAESADQKVEDEAKKK
QQRTMYIKRVIVHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGANHLTVTWKVAEGIYQ
HIDVREEGKENAFSLGQSLWINNEEFEDLDEITARYVQPMAIFARDLLDHKYYQDCNGGD
RKKMEELLAKTKREKPSFIPYFVSASKELPGKFLLGYQPRAKSRVEFVTVTPEGYRYRGQ
MFPSINGLFRWFKDHFQDPVPGITPSSTSRSSRTPASIDATPANINLADLTRAVNALPQN
MTTQMFNAIAAVTGQGQNPNATPAQWSSSQYGYGGSSAYHVFATPQQPVATPLLTPSYSY
TTPSQQPITTPQYHGNATPQSSHAPPSTSRQRSQPKSSTAHTAVDWGKIAEQWLQEKEQE
RRKQKAKMTPRPSPSPMIEGTPMSIAGDATPLLDEMDR
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactttgtggaaagcgaagctgaggaatctgaggaagagtacaacgaagaaggg
accgtagttccaaagaaacccaagaaattcatagaagatgatgatgaggaggaagaggaa
gataatgctgatgaccaggatgaacaggggaatttgaaggatttcatcaatgacgagttg
gacgaggatgaggaagatgatgacgaggcagggagcgatgcttccggaacatccgacagc
attgccaagaagagaaagcggaaggcttatgatgacagactagaagacgatgatttcgac
ctcattgaggaaaatctgggtgtcaaagtcaaaaggcaaaagttccggcgtgtgaaaaaa
gtctctgatgacgaggacgaggaggaggaagaacattccaagaaaggccacgagaaggaa
gccatcgctgatgaactcttcccagagtttgacggggaagaaagagagcaggtcgaggct
ccggtcattcctcccgaggaagaggaggaggaggaagaagaggagtctgatatcgatgac
tttatcgtcgatgatgacgggcagccactcaagaaaccaaagtggaagcgaaagtttcca
gggtacacagatgctgcccttcaggaagctcaggagatcttcggggtggacttcgattac
gacgagttcgacaagtacaacgagtacgacgaggagctggaggacgattacgagtacgaa
gacgaggagctcggtgaaggggagaccagggcccgtccgaagaaaaccgccaaaaagcgt
gtcagccgccggagtatcttcgagatctatgagccgagcgagctcgaaagcagccacctc
actgaccaggacaatgagatccgagtgaccgacatgcccgagaggttccagcttcgtggc
attccagtcaagccagctgaggatgatgagctagaggaagaggcagagtggatctacaga
aatgccttctcaacgccaagtatctctttacaggagagttcggattacctggagaggggc
caaggtgttagcaacttcagcagaaaaggtcccagcaccatccagaagatcaaagaggcg
ctcaattttatgaggaaccagcactttgaggtacctttcattgccttctacagaaaggaa
tacgtggagccagagctgaacatcaatgacctgtggaaggtctggcagtgggatgagaag
tggacacagctgaagaatcggaaagagaacctcacacgcctgttccagaagatgcaggct
taccagtacgagcaaatctccgctgatcccgacaagccgctggcagacggggtgagagcg
ctggacacaacggacgtcgaaagattgaaggacgtgcagtccattgacgagctacgagac
gtgtacaatcatttcctgctgtattacggccgcgatattccaaaaatgcagaacgcctcc
aaagtgacaaagaagaaatacaagaagaaccagcaggggagagaggacgaggaggaaggg
gagcgagacgaggttgaagaggaagagcggcttcccacggagcttaagcaggcgtctcgc
agagacatgtacaccatctgccagagtgccggcctagatggccttgccaagaagttcggt
ctgactcctgaacagtttggtgagaatctccgagacagttaccaacgtcacgagactgag
cagtttcccgctgagcccctggaactggccaaagattacgtttgcagtcagttttcatcg
cctgaaaacgtgctggaaggctctcggtacatggtggccatgcagattgcccgcgaaccc
ttggtcaagcaggtggtgaggcagaccttccaagaacgagccaagattaacatcatgccc
acaaagaaaggcaaaaaggatatcgatgaggcgcactacgcctactccttcaaatacata
aagaacaagcccgttaaagagctcagagatgatcagtttctgaagatgtgccttgccgag
gatgagggtctgttcaccctagatatctgcattgacatgaaaggactcgaaggttacggc
agtgaccagacttactttgaggaaatcaagcaattttactaccgcgacgagttcagccac
caagtgcaggagtggaacaaacagcggagcatggccatcgaaagggcactaaaccagttc
ctctacccgcagatggctaaggaacttaaaaacaagctgctcattgaggcgagggactac
ctgtgcaaggcatgcagccgcaagctttacaattggctaaaggtcgcaccgtaccggccc
gaccagcagaacgaagaggacgacgacgacttcatggaggagaatcaaagcaaaggagtc
cgagtcctggggctggcattttcgggagagagggacacgccagtcttctgctctcttgtt
aatggagatggtgaagtgaccgatttccttcgcctaccctacttcctgaagcgaaggaat
gcctggcgagaggaggagagggagaggaaggctcatgatattgaaacattgaaaaaattt
ctgctgaacaagaagcctcacgtcgtggctgttggtggagaaaacagggatgcactgatg
gtcatcgaagacatcaagcgggtggtgaacgaactggaacaggagcaccagatgtcaccc
atcggagtacagatggtggataatgagctcgccatgctctacatgaacagcaaaaagtct
gaaaatgacttccgcgattaccctccgctattgcggcaagctgtgtcattggctcgccgg
gtacaggacccgcttgttgagtttgctcaagtctgcagctcggacgaagacatcatgtgc
ctcaaattccacccgttacaggatcaagtaataaaggaagagttattcaatgcactttac
tgcgagtttatcaaccgggtgaacgaagtgggcgtggatgtcaacagagcgatcacccac
ccgcacactcaggcgctggttcagtacgtctgtgggttaggacctcgcaaaggatcacat
ttgcaaaagatcctgaaacagaataacacccgtctggaaaacaggacccagctagtcacc
atgtgccacatgggaccaaaagtcttcatcaactgcgcgggatttattaagatcgacact
gcctcgctaggggacagcaccgattcctatatcgaggtcctggacggttcccgagtccat
cctgaaacgtacgagtgggccaggaaaatggccgtcgatgcgctggagtacgatgagtcg
gcagaggatgctaaccctgccggagctttggaagaaattctggaaaatcccgaacggctt
aaggatctcgacctggatgcatttgcggaagagttggagaggcagggttatggcaacaaa
ggtatcactctgtatgacattcgagctgagctgagttgtaggtataaggacttgcgtgtg
ccttgccgatcaccaaacccagaggagatcttcaacatgctaacaaaggaaactccagag
accttctacatcggtaagttgattacctgcaacgtgactgggattgctcacagaagacct
cagggtgaaagttatgaccaggctataaggaatgatgaaactggcctctggcagtgtccg
ttctgccaacaggacaactttccagaactcagtgaggtctggaaccatttcgacagcggt
gcctgccctggccaggctattggagtgaaaaccaggctggacaataacgtagcgggtttc
attccaaccaaattcctcagcgacaagaacgttaaacacccggaggagagggtcaagatc
ggcatgaccgtccactgccgaatcatgaagatcgacattgagaagttcagtgtggacctc
acgtgtaggacctcggacctgatggacaagaacaacgaatggaagttggtcaaggacacg
tactatgacttcgacgctgaatcggcagatcagaaggtcgaggacgaagccaagaagaaa
caacaacgcacgatgtacatcaagagggtaatagtgcacccgtcgttccacaacatcaac
ttcaagcaggctgagaaaatgatggaaaccatggatcaaggagatgtcatcattaggccc
agcagcaaaggagcgaatcacttaaccgtgacctggaaagtggcagaagggatttaccag
cacattgacgtgcgagaggaaggcaaagagaacgccttcagtctgggacagtctctctgg
atcaacaatgaagaatttgaagacctggatgaaattactgctcgctacgtacagcccatg
gcgatttttgcccgcgacctgttggaccataaatactaccaggattgcaacggtggagac
cgcaagaaaatggaagaacttctagcaaaaaccaaaagggaaaaaccctcttttattccc
tatttcgtttccgcctcaaaggaattgccaggaaagtttttgttgggctaccaacctcgt
gctaaatcaagggttgagtttgtaacagtgaccccggaaggttatcgctatcgagggcag
atgttcccatccataaacggactgtttcgatggtttaaagatcatttccaggatcccgta
ccaggcattacaccttccagcacgagccgatccagcaggaccccagcctctatcgatgcg
acgccggctaatatcaatctggcggatctcacacgagctgtcaacgctctcccgcagaac
atgacgacgcagatgttcaatgccatcgcggccgtgactgggcagggtcagaatccaaat
gctacgccagcccagtggagctccagtcagtacggctatggcggaagcagtgcctatcac
gtgtttgccactccgcaacagccggtagcaaccccgctattgaccccgagctattcctac
acgacgcccagccagcaacccatcaccaccccacagtaccacgggaacgccacgccgcaa
agctctcacgctcctccctctacttcccggcaaagatcccagccaaagtcttcgactgct
cacaccgcggttgattggggtaagatagccgaacagtggctgcaggagaaggaacaggag
cggcggaaacagaaggccaagatgactccccgtccatcccccagccccatgatcgaaggc
acccccatgtccatcgctggcgacgccaccccactgctggacgaaatggatcggtag
DBGET
integrated database retrieval system
