Callorhinchus milii (elephant shark): 103180784
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Entry
103180784 CDS
T03088
Name
(RefSeq) exportin-5 isoform X1
KO
K14289
exportin-5
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103180784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmk03016
]
103180784
03036 Chromosome and associated proteins [BR:
cmk03036
]
103180784
Transfer RNA biogenesis [BR:
cmk03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
103180784
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
103180784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
DUF3514
Motif
Other DBs
NCBI-GeneID:
103180784
NCBI-ProteinID:
XP_042188913
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MSGEQITTLCEQLMKAVNVIMDGGSSSRYRLEALKFCEEFKEKCPQTVQCGLRLAEKNNT
GIVRHFGLQILEHSIKFRWNGMVQREKVQLKNSVMTLLSRGTHNIMVEEAYIKDALSRIV
VEMIKREWPQQWPDMLNEMDKLTAMGETQTELVMLILLRLVEDVVTFQTIPAQRRKDIQH
ALTQNMSQLFGFLLDILQEHTQNYKQLKADATQENKAKSHCRVAITTLSTMAGYVDWVGL
HHLTADGCKLLEVLCMLLTEPEFQFEAAECLLIAVIRKGKLEDRKPFMVLFSDAAMHCIL
SAAQTAHGAGLVEQHYMFLKRLCQLLTALGGQLTALWGGEKDIGQPPNFSKYLQAFLAFT
NHPSQYLRSSTQIAWCSFLRHEYISKDSVMLEIIPQLLHATMANLLKVGFPSKTDSASCE
YSRVDFDNDEDFNAFFNSFRAQQGETIRLSCRLAPMTGFNMASEALQYQLTAAIDVGPTM
SKTGTGLCSIFSPSFVQWDALTFFMESVMSQLFRTLDAEQLPVAEGVELLKAVLSYHTHD
PLILSCILTAVSTLCPFLLHDASVLPQVLEKLFASATFEVIEESQAPRTRAVKNVRRHAC
SSILKMCRDHPELIMPVFDMFYTHVKRLQQDERQLTQLEKCALMESLVLLSNQFKNYERQ
KAFLEELMCPVTSLWLSEEMHRVLSEPGLFLAYIGADVTPADPIMEDPSGINRSRISLCV
YTILGVVKRARWPSDLEEAKAGGFVVGFTPSGAPMYRNACTEHVIKLLDNLLALIRTHNN
LWQPEVMEQLSPHFRRAHDMLEVEKNAILGNSLQVEMRDERHKAMAPLEKCVAASSLTLN
FCIPQPLLDHADAPVYKSVLERMQGFFCTLYDNCFHILGNAGPSMLQDFFNVNNFAESVI
NSAFVNLENIADYRLRPVLRVFVKPLVQSCPPEHYESVLCPILGPLFSYLLQRLSAKWIV
INQRGLLEAESGDAEENPESQEMLEEQLTRLLTRESIDLMTVCCCVKRGPEPFCGDMEDD
EMMSTNDGPHTGAEELTELGKSLLKSEEFCKTLLVTAYSAISWNDTITCQRATLQLCWPL
IKQVTLSNLHSDAASWFLMSVLRGLQMHGQHEGCLAALVNLAFLIYEAMRPRHPDIKTVM
QQIPHISIDALEQFDQKLLNPSSHKMGDKRRKDLFKKLLSGCIGKPLGQKFKKEVHIKNL
PSLFKKPKPQTPPTPIEEEAAEDNGLASLFDPRVQDM
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgagcagatcacgacgctgtgcgagcagctgatgaaggcggtaaacgtgatc
atggacggaggctcgagttcacgctaccgactggaggccctgaagttttgcgaggagttc
aaggagaaatgtccacaaactgtacagtgtgggttgcgcctggctgagaaaaacaacact
ggaattgtccgccactttggacttcagattttggaacattcgatcaagttccgctggaat
ggcatggtgcagagagaaaaggttcaactgaagaacagtgtaatgaccctcctgtcgcgt
ggtacacataatattatggtagaagaggcttacatcaaagatgcactctcccgtattgtg
gtggagatgataaagcgagaatggccacagcaatggccagacatgctcaatgaaatggat
aagctaacagccatgggggagacgcagactgaactggtgatgctgatccttttgcggctg
gtggaagatgtggtgacattccagactatcccagctcagcgtaggaaggacatccagcat
gccttgactcagaacatgtcccagcttttcggtttcctgctggacatcctgcaggagcac
acgcagaattataaacaactgaaagcagatgcgactcaagaaaacaaggctaagtcacat
tgtcgggtagccatcacgactctaagcactatggctggatatgtggactgggttggctta
caccacctgacggctgatggctgtaagctattggaagtcctgtgcatgttattaactgaa
ccagaattccagttcgaggcagctgagtgtcttctcatcgctgtcatcaggaagggcaag
ctggaggatcgtaagccattcatggttctcttcagtgatgctgcaatgcactgcatttta
tcagccgcacagactgctcatggagctggactcgtggaacaacactatatgttcctgaaa
aggctttgtcaattactcacagctctgggaggacaactgactgcattgtggggtggtgag
aaggacattggccaacctcccaacttcagcaaatatttacaggcattcttggctttcacc
aaccacccaagccagtatttaagatcgtcaactcagatagcctggtgttcatttttaaga
catgaatatatctccaaggattctgtaatgctggagataattccacagttgttgcatgca
acaatggctaacctcctgaaggttggctttccctctaaaactgacagcgcaagttgcgag
tattcccgtgtggactttgacaacgatgaagacttcaatgcattcttcaattcattccga
gctcagcaaggagagaccattagactctcttgtcgtttggcaccaatgactggtttcaat
atggcatccgaagcactgcagtatcagcttacagcagccattgatgttggcccaaccatg
tccaagactgggacaggtttgtgttccatcttttcaccatcttttgtgcagtgggatgca
ctgactttcttcatggagagtgtcatgagccagttgttcagaaccttggatgcagagcaa
cttccagtagcagagggagttgagctccttaaagctgtgttgagctatcatacccatgat
cccctgattctttcttgtatcctgactgctgtctcaaccctctgtccgttccttctccat
gatgcctctgttttgccacaagtgcttgaaaagctctttgcatctgctacttttgaagtc
attgaagagagtcaggctccaaggactcgtgcagtaaagaatgttcgcaggcatgcttgt
tcatccatacttaagatgtgcagagatcacccagaactgatcatgccggtctttgacatg
ttctacactcatgtcaagcgcctgcaacaagacgaaaggcaacttacccagctagagaaa
tgtgccctgatggagtctcttgttctcctgagtaatcagttcaagaattatgagcgacag
aaagccttcctggaggagcttatgtgtccagttaccagtctctggctgtcggaggagatg
catagagtgctttccgagccagggttgttccttgcgtacattggcgcagacgtcactcca
gccgacccgattatggaagacccatcaggcatcaacaggtctaggatcagcttgtgtgtt
tacaccatacttggagttgtgaagcgggctcgctggcctagtgacctggaggaggcaaag
gccggagggttcgtggtcggattcacacccagcggggctccgatgtaccgcaacgcctgc
actgagcatgtcatcaaacttcttgacaacctgctcgccctgataaggacacacaataac
ctttggcagccagaagtgatggagcagctcagcccacatttcaggagagctcatgacatg
ttggaagtggaaaaaaatgcaattcttggcaattcactgcaagttgaaatgagagatgag
aggcacaaggctatggcaccacttgaaaaatgtgtagcagcatcaagtttgacattaaac
ttttgcatccctcagcctctgctggatcatgctgatgctccggtgtacaaatctgtcctg
gaacgtatgcaaggattcttctgtactctgtatgacaactgtttccacattcttggcaac
gctggacccagcatgcttcaagattttttcaacgtaaacaactttgcagaatctgtgatc
aactctgcttttgtgaacctggagaacattgctgattacaggctgcgcccagtgttgcgt
gttttcgtgaagcctttggttcagtcttgtccccctgaacattacgaatctgtgctgtgc
ccaattcttggaccactgttctcctacttgctgcagagactaagtgccaagtggattgtc
atcaatcagagggggctgttggaagctgaaagtggtgatgccgaagagaatccggaatca
caggaaatgctggaggaacaactgactcgcctcctgactcgcgaatccattgatctgatg
acagtttgttgttgtgtcaaaaggggtccagagcctttttgtggtgacatggaagatgac
gaaatgatgagcacaaatgatggtccacacactggagccgaagaactcactgaacttggg
aaaagtctcttgaaatctgaggaattctgcaagacgttgttggtaactgcttatagtgcc
atctcgtggaatgacactataacatgtcagagagcaacactgcaactatgttggccacta
attaaacaggttacactatcaaacctacactctgatgcagccagttggtttttgatgagt
gtgctcagagggttgcagatgcatggacaacatgaaggctgccttgctgcactagttaat
ctagcattcctgatctacgaggcaatgagaccacggcaccctgatataaaaacagtgatg
cagcagattcctcacatctctatagatgctttggaacagtttgaccagaagcttttgaac
ccttcgtctcataaaatgggtgataaaaggaggaaggatctcttcaagaaacttctgtca
ggttgtattgggaaaccgcttgggcaaaagttcaaaaaggaggtgcatatcaaaaacctt
ccctccctttttaagaaaccaaaaccacagaccccaccaacgccaatcgaagaggaggca
gcagaagataacggcctagcttcactatttgacccaagagtccaggacatgtga
DBGET
integrated database retrieval system