KEGG   Callorhinchus milii (elephant shark): 103180793
Entry
103180793         CDS       T03088                                 
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    103180793 (msh2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmk03400]
    103180793 (msh2)
DNA repair and recombination proteins [BR:cmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     103180793 (msh2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV MutS_I AAA_27 AKAP7_RIRII_bdg
Other DBs
NCBI-GeneID: 103180793
NCBI-ProteinID: XP_042188967
UniProt: V9KCK0
LinkDB
Position
Unknown
AA seq 932 aa
MAVQPREKLSWEGGQDGGLQAFHSSLPDKPRTTLRVFERSDYYTVHGKDAIFAAKEVFKT
SGVIKYLGTGSNKLESVVLSKMNFESLVRDLLLIRQYRVEVYRNKAGSKSSKENDWYLAC
KASPGNLTQFEEILFGSSDMSAAAGVVGVKLGTADGQRVVGIGYIDSTLRKLGVCEFPDS
DQFSNLEAMLVQIGPKECILSSSETAGDMAKLRQVVQRGGILITDRKKNEFTNKDIVQDL
NRLLKAKKGEQVSSAALPEMEKQVAMASVSAVIKYLELLSDETNFGQYQLMTFDLNQYMR
LDNAAVLALNLFQGSSEDAHGTQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIEERLN
LVEAFVEDPELRQNLQEDLLRRFPDISRLSKKFQRHTAHLQDCHRIYQAVNQLPNVVQVL
ERYEGTHQMMLKAAFISPLTDLIADFSKFQEMIETTLDMNQVENHEFLVKPSFDPNLTEL
REKMDELEKNMQSTLNHAARELGLEAGKTMKLESSIQLGYYFRVTCKEEKALRNNKKFNT
IDIQKNGVRFTNSKLSSYNEDYMKSREEYEEAQDVIVKEIINISAGYVDPQQTLNDVIAQ
LDAVVSFAHVANGAPVPYVRPVILERGQGQLILKGSRHPCIEVQDEVAFIPNDVTFEKDK
QMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCDSAEVTIVDCIMARVGAADSQLKG
VSTFMAEMLETAAILRSATEHSLIIIDELGRGTSTYDGFGLAWAISEYISTKICAFCMFA
THFHELTALADQVPTVHNLHVTALTTDETLTMLYRVKKGVCDQSFGIHVAELVMFPKHVI
ENAKDKALELEEFQNLGKSDDSDEGPAAKKSRQDKKDGEKIIADFLSDVKALPMTDASDE
EMKRELVRLKSEVLAKNNHFVQGILSRSKVVP
NT seq 2799 nt   +upstreamnt  +downstreamnt
atggcggtgcagccgcgggagaagctgagctgggagggcgggcaggacggcgggctgcag
gccttccacagctccctgccggacaagccccgcaccaccctcagggtgttcgagcgcagc
gactactacaccgtccacggcaaggatgccatcttcgccgccaaggaggtcttcaaaacc
agcggcgtcatcaagtacctcggcacaggaagcaataagttggaaagtgttgtactcagt
aagatgaactttgaatcgttggtcagggatctgttgctgatccgacaataccgtgttgag
gtttacaggaataaagctgggagtaagtcctcaaaggagaatgactggtatttggcgtgc
aaggcttctcctggtaacttgacccagtttgaagagattctctttggcagcagtgacatg
tctgctgcagctggtgttgttggtgttaaactgggcactgcagatggacaaagggttgtt
ggaattggctatattgactcaacactccggaagttaggagtgtgcgagtttccagacagt
gatcagttttcgaaccttgaggcgatgctggtgcagattgggccgaaggagtgtatatta
tcgagttctgagacggcaggagatatggccaaactccgtcaggtagttcaacgaggaggc
atcttgataactgaccgaaagaaaaatgaatttacaaataaagatatcgttcaggatttg
aaccgcctgctgaaagcaaagaaaggggagcaggtgtccagtgctgctttgccagagatg
gaaaagcaggttgccatggcctcggtttctgctgtcatcaaatatttggagctcctctct
gatgaaactaactttgggcagtaccagctgatgacgtttgacctgaaccagtacatgagg
ctggacaatgcagctgtgcttgcgctcaacctcttccagggttcgtcagaagacgcccat
ggtacacagtcgctggccggcctgctgaacaaatgcaggacccctcagggacagcgccta
gttaaccagtggatcaagcaacccctgatggataagaacagaattgaggagaggcttaac
ctggtggaggcctttgtggaagacccagagcttcggcagaatctacaggaggatttgctg
cggcgatttcctgacataagccgactatcaaagaagttccagcgtcatacagcacaccta
caagactgccaccggatctaccaggctgtgaatcaactcccaaatgtagtgcaggtgcta
gagagatatgaaggaacgcatcagatgatgttgaaagctgcattcatctcaccgctaaca
gacctaatcgccgatttctccaagtttcaggaaatgattgagacaactttagacatgaat
caggtggaaaaccacgaatttttggtgaaaccgtcttttgacccaaatctaactgaactg
agagagaagatggatgaactggagaaaaatatgcagtcaactctgaaccatgctgccagg
gagttagggcttgaagcaggcaagactatgaaactggaatcaagtattcagttaggttac
tatttccgagttacctgcaaggaggaaaaggctcttcgcaacaacaagaaatttaatacc
atagacatacagaagaatggagttcggtttacaaacagcaagctgagttcctacaacgaa
gactatatgaagagcagggaggagtatgaagaggcccaggatgtaattgtgaaagaaatc
attaatatctctgcaggatatgtggaccctcaacagacactaaatgatgtgattgctcaa
ctggatgcagtggtgagctttgcccacgtagctaatggagcaccagtgccgtatgtgcgg
cctgtgattcttgaaagaggccaaggacagcttatcctgaagggctccaggcatccctgc
attgaggttcaggatgaggtagccttcattcccaacgacgtcaccttcgagaaggataaa
cagatgtttcatataataaccggtccaaacatgggtggaaaatccacatatatccgccag
acgggtgtggttgtgctgatggcccaaatcggttgctttgtgccctgtgactccgcagag
gtcaccattgtggactgcatcatggctcgagtcggtgctgcagacagtcagctcaaagga
gtatcaaccttcatggccgaaatgctggagactgcagctatcttgaggtcggcgactgaa
cactccctgattattattgatgagctgggcagaggcacttctacgtatgatggctttggc
ctggcgtgggctatatccgaatacatctctacaaagatctgtgccttctgtatgtttgcc
actcactttcatgaactgacagccctcgctgaccaagtgccaacggtgcataacctgcac
gtcaccgcacttacaacagacgaaacattgaccatgctgtaccgtgtgaaaaaaggggtt
tgtgaccagagctttgggatccatgtagccgaacttgtcatgtttcccaaacacgtcatc
gagaatgccaaggataaggcactggagctggaggagtttcagaacttggggaagtcagat
gattctgatgagggccctgcagccaagaaatctcgtcaagacaaaaaggacggtgaaaag
atcattgcagactttttgtcagatgttaaggccttgcccatgactgatgcgtctgacgaa
gagatgaaacgggaactggtgaggttgaagtctgaagtcctggctaagaataaccatttt
gttcaaggaatcctttcaagatccaaagtggtgccataa

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