Callorhinchus milii (elephant shark): 103180793
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Entry
103180793 CDS
T03088
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103180793 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103180793 (msh2)
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103180793 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
AKAP7_RIRII_bdg
Motif
Other DBs
NCBI-GeneID:
103180793
NCBI-ProteinID:
XP_042188967
UniProt:
V9KCK0
LinkDB
All DBs
Position
Unknown
AA seq
932 aa
AA seq
DB search
MAVQPREKLSWEGGQDGGLQAFHSSLPDKPRTTLRVFERSDYYTVHGKDAIFAAKEVFKT
SGVIKYLGTGSNKLESVVLSKMNFESLVRDLLLIRQYRVEVYRNKAGSKSSKENDWYLAC
KASPGNLTQFEEILFGSSDMSAAAGVVGVKLGTADGQRVVGIGYIDSTLRKLGVCEFPDS
DQFSNLEAMLVQIGPKECILSSSETAGDMAKLRQVVQRGGILITDRKKNEFTNKDIVQDL
NRLLKAKKGEQVSSAALPEMEKQVAMASVSAVIKYLELLSDETNFGQYQLMTFDLNQYMR
LDNAAVLALNLFQGSSEDAHGTQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIEERLN
LVEAFVEDPELRQNLQEDLLRRFPDISRLSKKFQRHTAHLQDCHRIYQAVNQLPNVVQVL
ERYEGTHQMMLKAAFISPLTDLIADFSKFQEMIETTLDMNQVENHEFLVKPSFDPNLTEL
REKMDELEKNMQSTLNHAARELGLEAGKTMKLESSIQLGYYFRVTCKEEKALRNNKKFNT
IDIQKNGVRFTNSKLSSYNEDYMKSREEYEEAQDVIVKEIINISAGYVDPQQTLNDVIAQ
LDAVVSFAHVANGAPVPYVRPVILERGQGQLILKGSRHPCIEVQDEVAFIPNDVTFEKDK
QMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCDSAEVTIVDCIMARVGAADSQLKG
VSTFMAEMLETAAILRSATEHSLIIIDELGRGTSTYDGFGLAWAISEYISTKICAFCMFA
THFHELTALADQVPTVHNLHVTALTTDETLTMLYRVKKGVCDQSFGIHVAELVMFPKHVI
ENAKDKALELEEFQNLGKSDDSDEGPAAKKSRQDKKDGEKIIADFLSDVKALPMTDASDE
EMKRELVRLKSEVLAKNNHFVQGILSRSKVVP
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgcgggagaagctgagctgggagggcgggcaggacggcgggctgcag
gccttccacagctccctgccggacaagccccgcaccaccctcagggtgttcgagcgcagc
gactactacaccgtccacggcaaggatgccatcttcgccgccaaggaggtcttcaaaacc
agcggcgtcatcaagtacctcggcacaggaagcaataagttggaaagtgttgtactcagt
aagatgaactttgaatcgttggtcagggatctgttgctgatccgacaataccgtgttgag
gtttacaggaataaagctgggagtaagtcctcaaaggagaatgactggtatttggcgtgc
aaggcttctcctggtaacttgacccagtttgaagagattctctttggcagcagtgacatg
tctgctgcagctggtgttgttggtgttaaactgggcactgcagatggacaaagggttgtt
ggaattggctatattgactcaacactccggaagttaggagtgtgcgagtttccagacagt
gatcagttttcgaaccttgaggcgatgctggtgcagattgggccgaaggagtgtatatta
tcgagttctgagacggcaggagatatggccaaactccgtcaggtagttcaacgaggaggc
atcttgataactgaccgaaagaaaaatgaatttacaaataaagatatcgttcaggatttg
aaccgcctgctgaaagcaaagaaaggggagcaggtgtccagtgctgctttgccagagatg
gaaaagcaggttgccatggcctcggtttctgctgtcatcaaatatttggagctcctctct
gatgaaactaactttgggcagtaccagctgatgacgtttgacctgaaccagtacatgagg
ctggacaatgcagctgtgcttgcgctcaacctcttccagggttcgtcagaagacgcccat
ggtacacagtcgctggccggcctgctgaacaaatgcaggacccctcagggacagcgccta
gttaaccagtggatcaagcaacccctgatggataagaacagaattgaggagaggcttaac
ctggtggaggcctttgtggaagacccagagcttcggcagaatctacaggaggatttgctg
cggcgatttcctgacataagccgactatcaaagaagttccagcgtcatacagcacaccta
caagactgccaccggatctaccaggctgtgaatcaactcccaaatgtagtgcaggtgcta
gagagatatgaaggaacgcatcagatgatgttgaaagctgcattcatctcaccgctaaca
gacctaatcgccgatttctccaagtttcaggaaatgattgagacaactttagacatgaat
caggtggaaaaccacgaatttttggtgaaaccgtcttttgacccaaatctaactgaactg
agagagaagatggatgaactggagaaaaatatgcagtcaactctgaaccatgctgccagg
gagttagggcttgaagcaggcaagactatgaaactggaatcaagtattcagttaggttac
tatttccgagttacctgcaaggaggaaaaggctcttcgcaacaacaagaaatttaatacc
atagacatacagaagaatggagttcggtttacaaacagcaagctgagttcctacaacgaa
gactatatgaagagcagggaggagtatgaagaggcccaggatgtaattgtgaaagaaatc
attaatatctctgcaggatatgtggaccctcaacagacactaaatgatgtgattgctcaa
ctggatgcagtggtgagctttgcccacgtagctaatggagcaccagtgccgtatgtgcgg
cctgtgattcttgaaagaggccaaggacagcttatcctgaagggctccaggcatccctgc
attgaggttcaggatgaggtagccttcattcccaacgacgtcaccttcgagaaggataaa
cagatgtttcatataataaccggtccaaacatgggtggaaaatccacatatatccgccag
acgggtgtggttgtgctgatggcccaaatcggttgctttgtgccctgtgactccgcagag
gtcaccattgtggactgcatcatggctcgagtcggtgctgcagacagtcagctcaaagga
gtatcaaccttcatggccgaaatgctggagactgcagctatcttgaggtcggcgactgaa
cactccctgattattattgatgagctgggcagaggcacttctacgtatgatggctttggc
ctggcgtgggctatatccgaatacatctctacaaagatctgtgccttctgtatgtttgcc
actcactttcatgaactgacagccctcgctgaccaagtgccaacggtgcataacctgcac
gtcaccgcacttacaacagacgaaacattgaccatgctgtaccgtgtgaaaaaaggggtt
tgtgaccagagctttgggatccatgtagccgaacttgtcatgtttcccaaacacgtcatc
gagaatgccaaggataaggcactggagctggaggagtttcagaacttggggaagtcagat
gattctgatgagggccctgcagccaagaaatctcgtcaagacaaaaaggacggtgaaaag
atcattgcagactttttgtcagatgttaaggccttgcccatgactgatgcgtctgacgaa
gagatgaaacgggaactggtgaggttgaagtctgaagtcctggctaagaataaccatttt
gttcaaggaatcctttcaagatccaaagtggtgccataa
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