Callorhinchus milii (elephant shark): 103180824
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Entry
103180824 CDS
T03088
Symbol
nphp3
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-3
KO
K19360
nephrocystin-3
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cmk03037
]
103180824 (nphp3)
Cilium and associated proteins [BR:
cmk03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
103180824 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
NPHP3_N
SNAP
AAA_16
TPR_19
TPR_11
NACHT
ARM_TT21_C
DUF2225
ARM_TT21_4th
HAT_Syf1_CNRKL1_C
MIT
AAA_22
AAA_14
AAA_19
Pro_CA_2
Pesticin
RPN6_N
DUF627
Motif
Other DBs
NCBI-GeneID:
103180824
NCBI-ProteinID:
XP_042202413
LinkDB
All DBs
Position
Unknown
AA seq
1264 aa
AA seq
DB search
MAESDGLSGGGWPGIVSGLRRPLSSSPMAVISIRGFFFAFSRGAGGGVRGRGACSVRRAP
RGACSVRRALSGACSVRRGPPRRMLSAEGPPAAHAQCGGPRGACVFIGLVLVVFKEELVL
WFRLHPRDPTGTQCEYWSGGVLGSEPSMGSMMHLQQTFRGPEFAQSSIDVEGPFTNVNRD
DWDAAVATLLQVTPFYXQSLRSNTVRCYLMNTADTQSVVDVFLHEYMPNLQIMCESFGQF
LLIVKFPEEKASQYLPERRREIEKSSFCLFFVGSSLPSCMEEDCEEGFLKGAESRPLLIY
HRLDLNSECSDAVHQLIDKVSANQSQKAKIIKHSGSAEEGAKNVFIQVEKIIKQELLGLE
NTDLENKDSGIEDDSTNWEDEDFGDVIWNMHDEQEQIEAFQQASKSVCELGFEKYYDRLN
DLVTAPAPIPPLLVSGGPGSGKSLLLSKWIGHQQKCSPNTLILYHFVGKPLSTSSEPALI
IKRFTAKLLQHSWSMSALSLDPSKLLEEFPRWLEKLSARHQGSIIIIIDSIDQIQQAERH
MKWLIDPLPVNVRVIVSVNVETCPQAWRLWPTLHLDPLSPKDVKALINAEYCLVDMKLTK
EQEKKLEKHCRSATTCNALYVTLLAKIITDAKGLGDMDLILQHCFQCQDTVSLYRLILQS
VQVSLSTDQDRQLMREILSLIYASHNGVSEGELLEMCTDLTWPVLASTLHSLECMYVITY
CCGLLKFQHLQVRIADDVVNISSGKXSFFYLKAWESVKLEYMENDENNALSTHREKLVQF
FSQQLSRDRVTWRAADELPWLFQQQGDKEKLHNCLLNLFVSQNLYKRGHFAELLYYWQYV
GMDKSSMAAAYFESLKEYEKSCEGEDMITRLADLYETLGLFLKDLGLLSQAVAPLQRSLE
IRESALDPDHPSVAQALHQLAGVYVQWKKFGNAEQLYKQALEISENAHGSEHLRVAQELD
ALAMLYQKQNKYEQVESLRKRSMKIRLKVSRQKGNLPGFAILRRRVLQLEELTLGTESAD
TARTLNELGVLYYLQNNMETAELFFKRSLEMRERVLGHEHSDCAQSLNNLAALYNEKKEY
EKAEELYERALDIRRKALAPDHPLVAYTVKHLALLYKKRGKLDKAVPLCQLAVEIRQKSF
GPKHPSVATALVNLAVLYCQLKKHNEALPLYECALKIYEDSLGRSHPRVGETLKNLAVLS
YEEGNFEKAAELYKRAMEIKEAEASLVGGKAPSRHSSSGDTFSLRNALVPNPXXLELGPG
DSVT
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtcggacgggctgtcaggcggaggatggccggggattgtctcggggctccgg
cggccgctctcctcttctccaatggcggtgatttcaatccggggatttttttttgccttc
tcccggggggcgggggggggcgtcagaggccgcggcgcatgctcagtgcggagggccccc
cgcggcgcatgctcagtgcggagggccctcagcggcgcatgctcagtgcggaggggcccc
ccgcggcgcatgctcagtgcggaggggccccccgcggcgcatgctcagtgcggagggccc
cgcggcgcgtgcgttttcattggtttggttcttgttgtgtttaaagaagagttggtgctg
tggttccgacttcatccccgagaccctacaggcacccagtgtgaatactggagtggtggg
gtcctaggaagtgagccgtctatgggcagcatgatgcatcttcagcagactttccgaggt
ccagaatttgcacaaagttcaattgatgtggaaggacctttcaccaatgttaaccgagat
gactgggatgctgctgtggctacactactgcaggtcacccccttctacnctcagtctctc
aggagcaacacagtgcgctgctaccttatgaatactgcagatacacaatctgtggtggat
gtattcctccatgagtacatgccaaacctgcagattatgtgtgagagttttgggcaattt
cttcttatagtgaagttcccagaggagaaagcaagtcagtacttaccagagaggaggcga
gagattgagaaaagctccttttgtctgttctttgtaggttcttccttacctagttgtatg
gaggaggactgtgaagaaggcttcctgaagggtgctgagagcaggcctttgctaatctac
cacagactggacctcaatagtgaatgttcagatgcagtacaccagctcattgataaagta
tctgcaaaccaatctcaaaaagcaaagatcattaaacatagtggaagtgcagaggaagga
gctaaaaacgtttttatccaagtagaaaagattatcaaacaggaattgctgggcttagaa
aacactgatctggagaacaaagattctgggattgaagatgattctaccaattgggaagat
gaggactttggagatgtaatatggaatatgcatgatgagcaggaacagatagaagctttt
caacaagcttctaaatctgtctgtgaattaggatttgagaagtactatgatcggctgaat
gatcttgtgacggctcctgcacccatacctccgcttcttgtgtcaggtggtccaggctct
ggcaaatctcttttgctatccaaatggattggccaccaacaaaaatgctcacctaatacc
ttaatattatatcattttgtggggaagcccctatcgaccagttctgagccagcactgata
attaaaagatttactgcaaagctattgcagcattcctggtctatgtctgccctatctttg
gacccaagtaaattactggaagaatttccccgatggctggagaaactgtctgcacgccac
caaggcagcataattattatcatagattccatagatcaaatccagcaagctgaacggcac
atgaagtggctgattgatccgttgcctgtgaatgtaagggtgattgtttctgtaaatgtg
gaaacatgcccgcaagcatggagattatggccaactctacaccttgatccactgagtcca
aaggatgtaaaggctctgattaatgctgaatactgccttgttgatatgaaacttactaaa
gaacaggagaagaaactggagaagcattgtagatctgcgactacctgtaatgccctgtat
gttacactcttggccaaaataatcacagatgccaaaggtctaggagacatggatttgatt
ctacagcactgtttccaatgtcaggatacagtctctttgtataggctaatcctgcaatct
gtccaagtgtccctgtctactgatcaggacaggcaactgatgagagagatcctatctctt
atctacgcgagccacaatggtgtgagtgaaggagaactcctggagatgtgcacagatttg
acctggcctgtccttgcctctactcttcacagcttagagtgcatgtatgtgatcacatat
tgttgcggactgctgaagtttcagcatcttcaggtgagaatagctgatgatgttgtcaac
atttcaagtggtaaataatcttttttttatctcaaggcctgggaatctgtgaaattggaa
tatatggagaatgatgaaaacaatgctctctcaacacacagagaaaagcttgtccagttc
ttttcacagcaactgagtcgggacagagtaacctggcgggctgcagatgaacttccctgg
ctcttccagcagcagggagacaaagagaagttacacaactgcttactgaatctctttgtc
tctcagaatctttataagcggggccattttgcagagctgctgtactactggcagtatgtc
ggaatggataagagctccatggctgctgcttacttcgagtctttgaaagaatatgagaag
agctgtgagggcgaggacatgatcacacggctggcagacctttatgaaacactaggactc
tttctgaaggacttgggcctgctgagtcaggctgttgcaccgttacaacgttctctggag
atccgagagagcgcattagatccagatcatcccagtgtggctcaggcattgcaccagctt
gctggtgtatatgtgcagtggaagaagtttggaaatgcggaacagctgtacaagcaggca
ctcgagatcagtgaaaatgcccatggctctgagcatcttcgagtagctcaggagctggat
gctctagcaatgctttatcaaaaacaaaataaatatgaacaagtggagtcattaagaaag
cgttccatgaagataagactaaaggtttccagacagaaaggcaacttgcctggtttcgct
attcttcgtcgtcgggttctgcagttagaagagcttactctagggactgagtcagcagac
actgctcggaccttgaatgaactgggggtgctgtactatcttcaaaacaacatggagaca
gcagaactcttttttaaacgctctttggaaatgagggagcgggttcttggtcacgagcac
tcagactgtgcacaatccttgaataatctggcagccttgtacaatgagaagaaggaatat
gagaaagctgaggagctgtatgagagggcacttgacatccggcgaaaagcgctagcacct
gatcatccactggtggcctacactgtcaaacatcttgcactattgtacaaaaaaagggga
aagttggacaaagctgttcctttatgccaacttgcagttgaaattcgacaaaaatccttt
ggtccgaagcacccgagtgtggccactgccttggtaaacctggctgtgctctactgtcaa
ttgaaaaaacacaatgaagctttgccactatatgaatgtgctctcaaaatctatgaggac
agtttgggtcgttctcatcccagagtgggagagacactaaagaatttagcagtgcttagt
tacgaggagggcaactttgaaaaggctgcggaattgtacaagagagcaatggaaattaag
gaagctgaagcctcgctggtgggtggaaaagctccttcaagacattcctccagtggagac
accttcagtttacgaaatgctctagttcctaatccctagtaattggaattgggacctggt
gactcagttacttag
DBGET
integrated database retrieval system
