Callorhinchus milii (elephant shark): 103180839
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Entry
103180839 CDS
T03088
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103180839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103180839
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103180839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
AAA_29
WPP
Motif
Other DBs
NCBI-GeneID:
103180839
NCBI-ProteinID:
XP_042189104
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All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MEFQRASAEWDVLISLAHYSQGGDGPMCRPVVCLPEEDACSFLELRGSRHPCVSKTFFGD
DFIPNDLVVGRGESEDAEGSDGAAQASCMLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVP
AESCKLTPVDRVFTRLGASDRIMSGESTFFVELSETSSILQHATQHSLVLLDELGRGTAT
YDGTAIASAVVKELAENIRCRTLFSTHYHSLVEDFSHSSAVRLGHMACMVENECEDPSQE
TITFLYKFIKGACPKSYGFNAARLADIPEEIIQKGHQKAKEFEKTTSCLRLFKAVCCLVG
GPQTDVHAIQAVLKKIAEM
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggagttccagagggcgagcgcagagtgggatgttctgatcagcctggcccactacagc
cagggcggagatgggccgatgtgcagacctgtggtgtgccttcccgaggaagacgcctgc
tcattcctggagctccgcggctcccgccacccgtgcgtttccaaaactttttttggagac
gatttcattcccaacgaccttgtcgtcggccgtggggagagtgaagacgcggaaggcagt
gatggcgcggcgcaggcttcctgcatgttggtgaccggcccgaacatgggtggcaagtcc
actctcatgagacaggctggtctcctggtgatcatggctcagttgggttgctatgtgcct
gctgagagctgcaagcttactccggtcgaccgagttttcacacgactgggagcgtctgac
agaattatgtcgggtgaaagcactttctttgtggagctgagcgagacatccagcatcctg
caacatgcaacccagcattctctggtgcttctggatgaattgggtcgaggcacagcgacc
tacgatggcacggccatagctagtgccgtggttaaggagctggctgaaaacatcaggtgc
cgcactctgttttctacacactaccattccctggtggaggatttttctcactccagtgca
gtccgtttaggccatatggcttgtatggttgagaatgagtgcgaggatccgagccaagaa
accatcacattcctgtataagttcatcaaaggagcgtgccctaaaagctatggatttaat
gcagcacgccttgcagatattcccgaggaaatcatccaaaagggtcaccagaaagccaaa
gagtttgagaagacaactagctgcctcaggcttttcaaggcggtgtgctgtttggttgga
ggcccacagactgacgtgcatgctatacaggcagtcctcaagaagattgcagagatgtga
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