Callorhinchus milii (elephant shark): 103180929
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Entry
103180929 CDS
T03088
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103180929
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103180929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
103180929
NCBI-ProteinID:
XP_042188972
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MGVHDLWQILEPVKEHVPLQNLSGKTLAVDMSLWVCEAQTVKAMMGTVIKPHLRNLFFRV
SSLTLMGVKLIFVVEGNAPKLKAETMSKRNEARCGTFRKPDSSSVRRGRSHFQSILKECC
ELLDCLGIPWVNAAGEAEAMCAYLNFNGYVDGCISNDGDTFLYGAKIVYRNFTMNTKDPH
VDCYKMSTVKSELGLERDSLIGLAILVGCDYLPKGVPGVGKEQAMKLIEILNGESLLQRF
RLWKREFDGAVTHDTVMKKKVHCSLCQHPRSAQDQEHRGCEICGSTQLCEMKGNDYCCPC
DWHQAEQDRKVSAVENNLKKKARVCVHFPFEEVIKEFLVTKDKMIQNIHWRRPNLLSIQN
FNKKKMEWPKHYTSEKVLVLLTHHDIMERTLGKRDPWHLQPIRIVKTRIRNGIPCFEILW
EKPENYVYSDDQSEDSQYSVTTIEDQLLFQAAYPDVSALFHRQKAEAEENKQKSKSKRKG
KAKPESDELAEQLSQMNLQLPSSGEESNQSVQKRVNQRDNPIKWSHPNPIGSCTLLPKFS
CEDPASEMAQIAINSITELGKANGEPLTLLAAENKLDVCALSPSMSVLVAELNLSGIDWG
ATSFGTPTNAQVASKITEGCCGSSTFTNELKEDKVLKVNTASSKHEPVQINTKQLLHKDM
SGQQDPENMSLRDRILLKNSHSFFSLGSRSNSDAGHILLSAVQKGGPEFVSEDKPICNIK
PLSNNKMILGSNILEKQHTEQEQILIHSSEEDATTTVKPFTLLDKQIPRDSSEKNFGAHS
FQTLESNNVPFKLQKSKVEKPHREKLVAKNIQTKNSVCHKVYSSSDDSDNENSGHRKQKP
SIKSRTAVRTVEKCSQAMSWRVNVKSSCSKAGYTGVNTGSVKPKVASYSSAEKNEEAQLM
YNDSKATTANTSQNKLSAVCESSIVQQCKAVQLKSCPINVDTSNLSDGEDSVILIDSPLP
LSERLKFRL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgcatgacttatggcagattttggagcctgtcaaagaacatgttccattacaa
aatctcagcgggaaaacattagccgtcgatatgagcttgtgggtgtgtgaggctcagact
gtcaaagccatgatgggaaccgtcatcaagccacacctcagaaatttgttcttccgtgtc
tcatctctcactctgatgggtgtgaagctcatattcgtggtcgaagggaatgccccaaaa
cttaaggcagagactatgagcaaacggaatgaggcaagatgtggaacattcagaaaacca
gacagctcttcagttcgaagaggaagatcacattttcaatccattcttaaagaatgctgt
gagttgctggattgtttggggatcccgtgggtgaatgcagctggtgaagccgaagctatg
tgtgcctacttaaattttaacggctatgttgatgggtgtatcagtaatgatggtgatacc
ttcctgtatggagctaagattgtgtacagaaacttcactatgaacacaaaggacccacat
gtggactgctataaaatgtcaacagtgaaatcagagttgggtcttgagcgagattcactc
attggattggccattctggttggatgtgattatctgccaaagggagttccaggagttggg
aaagaacaggccatgaagctgattgagatactgaatggagaaagccttctgcaaaggttc
cggctttggaagcgagagtttgacggcgctgttactcatgatacagttatgaaaaagaaa
gtccactgctcattgtgtcaacacccacgttcagctcaggatcaggagcacagaggttgt
gaaatttgtggaagcacccagttatgtgagatgaaaggcaatgactactgctgtccttgt
gactggcatcaggctgagcaggacaggaaagttagtgctgtggagaacaatctcaaaaaa
aaagcaagagtttgtgtacactttccatttgaggaggtaatcaaagaatttcttgtcact
aaagacaagatgattcagaacattcactggaggaggccaaatctactttccattcagaat
tttaacaagaaaaaaatggaatggccaaaacactacacatctgagaaagtattggtgtta
ctcacgcaccacgatataatggagagaacattgggaaagcgagatccttggcatttacaa
ccaataagaatcgtcaagacaagaattcgcaatggaatcccttgttttgaaattctatgg
gaaaaaccagaaaactatgtttactcggatgatcaatctgaagattctcagtattctgta
acaacaatagaggatcagcttctctttcaagctgcgtacccagatgtcagtgctctgttt
catagacagaaagctgaagctgaggagaataagcagaaaagtaagagcaaaaggaaaggc
aaggcaaagccagagtctgatgaacttgcagagcaactgtctcagatgaatcttcagctc
cccagtagtggtgaagagagtaaccaatctgttcaaaagcgtgtaaatcaaagagacaat
ccgatcaaatggtctcatcccaatcctattggctcttgcactctgttgcccaagttctcc
tgtgaagatcctgcaagtgaaatggcacaaattgccattaatagcattacagaattagga
aaagctaacggtgagcctttaacccttttagcagcagagaacaaacttgatgtctgtgcc
ttgtccccttctatgtctgtgttggttgcagagttgaatttgagtggcattgactggggg
gctacttcatttggcacaccaacaaacgctcaggttgctagcaaaataactgaaggctgt
tgtggatcttcaacttttactaatgaattgaaggaggacaaggtattgaaggtaaatact
gcatcatcaaaacatgagcctgttcaaatcaatactaaacaattactccataaggatatg
tctgggcagcaagatccagagaacatgtctttaagagatcgaattctactgaagaattca
cattcatttttttcccttggatcgagatccaattcagacgctggccatatcctgctctct
gctgttcagaaaggtggtcctgagtttgtcagtgaagataaacccatctgcaatattaaa
cctctgagtaacaacaaaatgatcctaggcagtaatattttagaaaaacaacatactgag
caagagcaaatattaattcacagttctgaagaggatgcaacaacaacagtgaaaccattt
actttgttggacaagcagattcccagagactcaagtgagaagaactttggagcgcattcc
ttccaaacattagaatcaaataatgtcccatttaaactgcagaaaagtaaagtagagaaa
ccacacagagaaaaactggtggctaaaaatattcaaacaaagaacagtgtctgtcacaag
gtgtattcctccagcgatgatagcgataatgagaactcgggacaccgaaaacaaaagcct
agcatcaaatctcggactgcagtaaggactgtggaaaagtgcagccaagcaatgtcttgg
cgtgtcaacgttaaatccagctgcagtaaagcaggttacactggtgttaatactggaagc
gttaaacctaaagtagcaagctatagtagtgcagagaaaaatgaggaagcacagctaatg
tacaatgatagcaaggctaccaccgcaaacacatctcagaacaagttgtctgcagtgtgt
gaaagtagcattgtgcagcagtgtaaggccgtacagctaaaatcatgtccaatcaatgtg
gatacttctaacttgagtgatggagaagattcagttatactaatagacagccctctgcca
ctatcagaaaggctgaagtttcgactctaa
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