Callorhinchus milii (elephant shark): 103180936
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Entry
103180936 CDS
T03088
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmk03041
]
103180936 (ddx1)
03016 Transfer RNA biogenesis [BR:
cmk03016
]
103180936 (ddx1)
Enzymes [BR:
cmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103180936 (ddx1)
Spliceosome [BR:
cmk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103180936 (ddx1)
Transfer RNA biogenesis [BR:
cmk03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
103180936 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
Motif
Other DBs
NCBI-GeneID:
103180936
NCBI-ProteinID:
XP_007895252
UniProt:
V9KHQ8
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQSESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGGKASVKTGGAVFNKWQMNPYDRGSAFAIGGDGLCCQSREFKEW
HGCRSTKGVTKGKYYYELSCHDQGLCRVGWSTMQASLDLGTDKYSFGFGGTGKKSFNKQF
DSYGEEFTMHDTIGCYLDFEKEILLFSKNGKDLGHAFDIPAHLKGQAFFAACVLKNAELR
FNFGEEEFKFPPKDGFIALNKASDGHTVKSQHTGTAQVAQAKNLPNSPKSLIIEPSRELA
EQTLNNVKQFKKYVVDPKLRELLIIGGVSAKDQLAVLEQGVDIVVGTPGRIDDLVSTGKL
NLSQVRFLVLDEADGLLTQGYSDFISRIHSQIPQVTSDGKRLQVIICSATLHSFDVKKLA
EKIMHFPTWVDLKGEDSVPETVHHVVVRVNPKNDRSWEKLGKHVRTDEVHARDNTRPGAN
SPEMLSEAIKILKGEYILRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQNGGGPDRKGHQF
ACVCLHGDRKPHERKQNLERFKKADVKFLICTDVAARGIDIHGVPFVINVTLPDEKQNYV
HRIGRVGRADRMGLAISLVASEKEKVWYHVCANRGKGCYNTRLKDQGGCTIWYNETQLLS
DIEEHLNVIISQVEPDLKIPVDEFDGKVVYGKKKAAGGGQYKGHVDALASTVQELAALEK
EAQSSFLHFGYLPNQLFRRV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttttcagagatgggtgttatgccagagattgctcaggctgtagaggagatg
gactggcttctccctacagatatccagtctgagtccatccctttgatcctgggtggtggt
gatgttttgatggcagcagagaccggtagtggaaagactggagcctttagcatacctgtt
atacagatagtgtatgaaacactcaaggaccaacaagaaggcaagaaggggggcaaagca
agtgtcaagactggaggtgcagtctttaacaaatggcagatgaatccttatgaccggggc
tcagcatttgctattggaggtgatggtttgtgctgtcagagcagggaattcaaggaatgg
catggatgccgatctacaaaaggagtgaccaagggaaaatattactatgaattgtcttgc
catgaccagggcttgtgcagagttggttggtctaccatgcaggcttctcttgatttgggt
actgacaaatatagttttggatttggtggaactggaaagaaatctttcaacaaacaattt
gatagctatggggaggaatttaccatgcacgatactattggatgctacctcgattttgaa
aaagagattttattattttcaaaaaatgggaaagatcttggccacgctttcgatattcct
gcacatctaaagggccaagccttctttgctgcttgtgttttaaagaatgctgagctcaga
tttaactttggtgaagaagagttcaaattccctccaaaggatggcttcatagcactgaac
aaggcttctgatggtcatactgtgaagtcacagcacaccggaaccgcacaggtggctcag
gctaagaacttaccaaactcgccaaagtcgcttattattgagccttctagagaactggct
gaacaaaccctcaacaacgttaaacagtttaagaaatatgtggttgatcccaaactaagg
gaacttttgattattggaggtgtatctgcaaaagaccaactagctgtgttggagcaaggg
gtggatatagttgttggaactccaggcagaatagatgaccttgtttcaacaggaaaactg
aatctgtctcaagttaggtttttggtgctggatgaagctgatggcttgcttactcaagga
tattctgatttcatctcaagaatacattctcagattcctcaagttacatctgatggcaag
agactgcaagtaattatctgctctgccacacttcattcatttgatgtcaagaaactggcg
gagaagatcatgcatttcccaacctgggtagatcttaaaggagaggattctgttcctgag
actgtacatcatgttgttgtgcgagttaaccccaaaaatgaccgctcctgggagaaactt
ggaaaacacgtccggaccgatgaggtacatgcaagagacaacacaagacctggtgccaat
tctccagagatgttgtcagaagctattaaaatcttaaaaggtgaatacatcctgcgtgca
atcaaagagcacaagatggatcaggcgattatcttttgcagaacaaagattgactgtgat
aacttggaacagtattttattcagaatggtggaggaccagatcgaaaaggtcatcagttt
gcttgtgtttgtttgcatggtgacaggaaacctcatgaaagaaaacaaaacttggaaaga
ttcaagaaagcggatgtaaaatttctgatctgtactgatgttgctgccaggggtattgac
attcatggtgttccttttgtcattaatgtgactcttcctgatgaaaagcagaactatgtg
catagaatcggtagagtggggagagctgacaggatgggtcttgccatttccttggtagca
tctgagaaagaaaaggtttggtaccatgtttgcgccaatcgtgggaaaggttgctacaac
acaaggctgaaggatcaaggtggctgcactatatggtacaacgaaacacagctgttgagt
gacattgaagagcacttgaatgtcatcatctcccaggttgagcctgacctaaagatacca
gtggatgaatttgatggaaaagtggtctatggcaagaaaaaagcagcaggaggtggtcag
tacaagggccatgtcgatgctttggcatccacagtacaagagctggctgctcttgaaaaa
gaagctcaatcatcgttcttacattttggctaccttcccaaccaattgttcagacgtgtt
taa
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